RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 IGKV1-5P01602 117 aa5.85□□□□□ -1.47
SRGAP3-213ENST00000618999 EGR1P18146 543 aa5.85□□□□□ -1.47
SRGAP3-213ENST00000618999 KIR2DL2P43627 348 aaPredicted RBP5.85□□□□□ -1.47
SRGAP3-213ENST00000618999 C1orf194Q5T5A4 169 aa5.85□□□□□ -1.47
SRGAP3-213ENST00000618999 ACSM6Q6P461 480 aa5.85□□□□□ -1.47
SRGAP3-213ENST00000618999 CLEC2AQ6UVW9 174 aa5.85□□□□□ -1.47
SRGAP3-213ENST00000618999 SSX7Q7RTT5 188 aa5.85□□□□□ -1.47
SRGAP3-213ENST00000618999 ZCCHC14Q8WYQ9 949 aaKnown RBP5.85□□□□□ -1.47
SRGAP3-213ENST00000618999 OPN3Q9H1Y3 402 aaPredicted RBP5.85□□□□□ -1.47
SRGAP3-213ENST00000618999 LAMA5O15230 3695 aa5.85□□□□□ -1.47
SRGAP3-213ENST00000618999 IL18BPO95998 194 aa5.85□□□□□ -1.47
SRGAP3-213ENST00000618999 GZMHP20718 246 aa5.85□□□□□ -1.47
SRGAP3-213ENST00000618999 MZT1Q08AG7 82 aa5.85□□□□□ -1.47
SRGAP3-213ENST00000618999 RNF151Q2KHN1 245 aa5.85□□□□□ -1.47
SRGAP3-213ENST00000618999 NRN1LQ496H8 165 aa5.85□□□□□ -1.47
SRGAP3-213ENST00000618999 BTNL3Q6UXE8 466 aa5.85□□□□□ -1.47
SRGAP3-213ENST00000618999 VN1R17PQ8TDU5 208 aa5.85□□□□□ -1.47
SRGAP3-213ENST00000618999 GATAD1Q8WUU5 269 aa5.85□□□□□ -1.47
SRGAP3-213ENST00000618999 HSPB9Q9BQS6 159 aa5.85□□□□□ -1.47
SRGAP3-213ENST00000618999 SNHG12Q9BXW3 62 aa5.85□□□□□ -1.47
SRGAP3-213ENST00000618999 NPCDR1Q9BY65 106 aa5.85□□□□□ -1.47
SRGAP3-213ENST00000618999 PARD6GQ9BYG4 376 aaPredicted RBP5.85□□□□□ -1.47
SRGAP3-213ENST00000618999 PLEKHA3Q9HB20 300 aa5.85□□□□□ -1.47
SRGAP3-213ENST00000618999 GCM1Q9NP62 436 aa5.85□□□□□ -1.47
SRGAP3-213ENST00000618999 GRIFINA4D1Z8 144 aa5.84□□□□□ -1.47
SRGAP3-213ENST00000618999 IGHV1-2P23083 117 aa5.84□□□□□ -1.47
SRGAP3-213ENST00000618999 OR5I1Q13606 314 aa5.84□□□□□ -1.47
SRGAP3-213ENST00000618999 LTC4SQ16873 150 aa5.84□□□□□ -1.47
SRGAP3-213ENST00000618999 C1orf185Q5T7R7 199 aa5.84□□□□□ -1.47
SRGAP3-213ENST00000618999 PCSK4Q6UW60 755 aa5.84□□□□□ -1.47
SRGAP3-213ENST00000618999 MDP1Q86V88 176 aa5.84□□□□□ -1.47
SRGAP3-213ENST00000618999 SFRP2Q96HF1 295 aa5.84□□□□□ -1.47
SRGAP3-213ENST00000618999 PYGO2Q9BRQ0 406 aa5.84□□□□□ -1.47
SRGAP3-213ENST00000618999 MED12LQ86YW9 2145 aa5.84□□□□□ -1.47
SRGAP3-213ENST00000618999 ATRXP46100 2492 aa5.84□□□□□ -1.47
SRGAP3-213ENST00000618999 TRAV24A0A0B4J272 114 aa5.84□□□□□ -1.47
SRGAP3-213ENST00000618999 LRRC30A6NM36 301 aa5.84□□□□□ -1.47
SRGAP3-213ENST00000618999 KIAA1324LA8MWY0 1029 aaPredicted RBP5.84□□□□□ -1.47
SRGAP3-213ENST00000618999 ZG16O60844 167 aa5.84□□□□□ -1.47
SRGAP3-213ENST00000618999 OR2H2O95918 312 aa5.84□□□□□ -1.47
SRGAP3-213ENST00000618999 CLEC3BP05452 202 aa5.84□□□□□ -1.47
SRGAP3-213ENST00000618999 CD99P14209 185 aa5.84□□□□□ -1.47
SRGAP3-213ENST00000618999 TFF3Q07654 80 aa5.84□□□□□ -1.47
SRGAP3-213ENST00000618999 ADIPOQQ15848 244 aa5.84□□□□□ -1.47
SRGAP3-213ENST00000618999 TBC1D28Q2M2D7 210 aa5.84□□□□□ -1.47
SRGAP3-213ENST00000618999 TEX38Q6PEX7 206 aa5.84□□□□□ -1.47
SRGAP3-213ENST00000618999 Q6ZT83 130 aa5.84□□□□□ -1.47
SRGAP3-213ENST00000618999 ODF3L1Q8IXM7 274 aa5.84□□□□□ -1.47
SRGAP3-213ENST00000618999 RPRMLQ8N4K4 120 aa5.84□□□□□ -1.47
SRGAP3-213ENST00000618999 OR5P3Q8WZ94 311 aa5.84□□□□□ -1.47
SRGAP3-213ENST00000618999 BCL2L2Q92843 193 aaPredicted RBP5.84□□□□□ -1.47
SRGAP3-213ENST00000618999 SNRNP40Q96DI7 357 aaKnown RBP5.84□□□□□ -1.47
SRGAP3-213ENST00000618999 TXNDC17Q9BRA2 123 aa5.84□□□□□ -1.47
SRGAP3-213ENST00000618999 HINT2Q9BX68 163 aa5.84□□□□□ -1.47
SRGAP3-213ENST00000618999 PKIBQ9C010 78 aa5.84□□□□□ -1.47
SRGAP3-213ENST00000618999 SERTAD4Q9NUC0 356 aa5.84□□□□□ -1.47
SRGAP3-213ENST00000618999 TRAV38-1A0A0B4J264 116 aa5.84□□□□□ -1.47
SRGAP3-213ENST00000618999 ZNF503-AS2A6NEH8 195 aa5.84□□□□□ -1.47
SRGAP3-213ENST00000618999 CBY3A6NI87 242 aa5.84□□□□□ -1.47
SRGAP3-213ENST00000618999 COX5BP10606 129 aa5.84□□□□□ -1.47
SRGAP3-213ENST00000618999 CD1BP29016 333 aa5.84□□□□□ -1.47
SRGAP3-213ENST00000618999 GNB2P62879 340 aa5.84□□□□□ -1.47
SRGAP3-213ENST00000618999 RBPJQ06330 500 aa5.84□□□□□ -1.47
SRGAP3-213ENST00000618999 COL5A1-AS1Q5SY13 56 aa5.84□□□□□ -1.47
SRGAP3-213ENST00000618999 TMEM14EPQ6UXP3 125 aa5.84□□□□□ -1.47
SRGAP3-213ENST00000618999 ZNF645Q8N7E2 425 aa5.84□□□□□ -1.47
SRGAP3-213ENST00000618999 FAM122AQ96E09 287 aa5.84□□□□□ -1.47
SRGAP3-213ENST00000618999 FAM234AQ9H0X4 552 aa5.84□□□□□ -1.47
SRGAP3-213ENST00000618999 GNG12Q9UBI6 72 aa5.84□□□□□ -1.47
SRGAP3-213ENST00000618999 DKK4Q9UBT3 224 aa5.84□□□□□ -1.47
SRGAP3-213ENST00000618999 INTS1Q8N201 2190 aaKnown RBP5.83□□□□□ -1.48
SRGAP3-213ENST00000618999 SPINT2O43291 252 aa5.83□□□□□ -1.48
SRGAP3-213ENST00000618999 AGFG2O95081 481 aa5.83□□□□□ -1.48
SRGAP3-213ENST00000618999 TYMSP04818 313 aa5.83□□□□□ -1.48
SRGAP3-213ENST00000618999 WNT5AP41221 380 aa5.83□□□□□ -1.48
SRGAP3-213ENST00000618999 PRR30Q53SZ7 412 aaPredicted RBP5.83□□□□□ -1.48
SRGAP3-213ENST00000618999 C20orf204Q6ZNR8 217 aa5.83□□□□□ -1.48
SRGAP3-213ENST00000618999 Q6ZPA2 131 aa5.83□□□□□ -1.48
SRGAP3-213ENST00000618999 FAM57AQ8TBR7 257 aa5.83□□□□□ -1.48
SRGAP3-213ENST00000618999 BORCS7Q96B45 105 aa5.83□□□□□ -1.48
SRGAP3-213ENST00000618999 IMMP2LQ96T52 175 aa5.83□□□□□ -1.48
SRGAP3-213ENST00000618999 NEU1Q99519 415 aa5.83□□□□□ -1.48
SRGAP3-213ENST00000618999 MSL2Q9HCI7 577 aa5.83□□□□□ -1.48
SRGAP3-213ENST00000618999 NAT8BQ9UHF3 227 aa5.83□□□□□ -1.48
SRGAP3-213ENST00000618999 TRBV6-6A0A0A6YYG2 114 aa5.83□□□□□ -1.48
SRGAP3-213ENST00000618999 ODAMA1E959 279 aa5.83□□□□□ -1.48
SRGAP3-213ENST00000618999 SNURFLB1AK76 121 aa5.83□□□□□ -1.48
SRGAP3-213ENST00000618999 S1PR2O95136 353 aa5.83□□□□□ -1.48
SRGAP3-213ENST00000618999 CXorf1O96002 111 aa5.83□□□□□ -1.48
SRGAP3-213ENST00000618999 ATP5G3P48201 142 aa5.83□□□□□ -1.48
SRGAP3-213ENST00000618999 AMTP48728 403 aa5.83□□□□□ -1.48
SRGAP3-213ENST00000618999 THBS3P49746 956 aa5.83□□□□□ -1.48
SRGAP3-213ENST00000618999 TDGF1P3P51864 188 aa5.83□□□□□ -1.48
SRGAP3-213ENST00000618999 RPEL1Q2QD12 228 aa5.83□□□□□ -1.48
SRGAP3-213ENST00000618999 LINC01551Q86U37 167 aa5.83□□□□□ -1.48
SRGAP3-213ENST00000618999 HAPLN4Q86UW8 402 aa5.83□□□□□ -1.48
SRGAP3-213ENST00000618999 TMEM256Q8N2U0 113 aa5.83□□□□□ -1.48
SRGAP3-213ENST00000618999 OR1L6Q8NGR2 347 aa5.83□□□□□ -1.48
SRGAP3-213ENST00000618999 R3HDM4Q96D70 268 aa5.83□□□□□ -1.48
SRGAP3-213ENST00000618999 TMEM204Q9BSN7 226 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms