RNA–Protein interactions for RNA: ENST00000618819.4

PTPN9-206, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PTPN9, Length 7,813 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-206ENST00000618819 TMEM240Q5SV17 173 aa12.35□□□□□ -0.43
PTPN9-206ENST00000618819 LINC01465Q8N7H1 131 aa12.35□□□□□ -0.43
PTPN9-206ENST00000618819 DIRC2Q96SL1 478 aa12.35□□□□□ -0.43
PTPN9-206ENST00000618819 NPDC1Q9NQX5 325 aaPredicted RBP12.35□□□□□ -0.43
PTPN9-206ENST00000618819 COL14A1Q05707 1796 aaKnown RBP12.34□□□□□ -0.43
PTPN9-206ENST00000618819 ISXQ2M1V0 245 aa12.34□□□□□ -0.43
PTPN9-206ENST00000618819 MRPL52Q86TS9 123 aaKnown RBP12.34□□□□□ -0.43
PTPN9-206ENST00000618819 FMC1Q96HJ9 113 aa12.34□□□□□ -0.43
PTPN9-206ENST00000618819 SDF2L1Q9HCN8 221 aa12.34□□□□□ -0.43
PTPN9-206ENST00000618819 RPL39P5Q59GN2 51 aa12.34□□□□□ -0.43
PTPN9-206ENST00000618819 DEFB104AQ8WTQ1 72 aa12.34□□□□□ -0.43
PTPN9-206ENST00000618819 TMEM170AQ8WVE7 144 aa12.34□□□□□ -0.43
PTPN9-206ENST00000618819 ODAMA1E959 279 aa12.34□□□□□ -0.43
PTPN9-206ENST00000618819 CCL4P13236 92 aa12.34□□□□□ -0.43
PTPN9-206ENST00000618819 ERG28Q9UKR5 140 aa12.34□□□□□ -0.43
PTPN9-206ENST00000618819 FOXA2Q9Y261 457 aaPredicted RBP12.34□□□□□ -0.43
PTPN9-206ENST00000618819 IGKCP01834 107 aa12.34□□□□□ -0.43
PTPN9-206ENST00000618819 MIR17HGQ75NE6 70 aa12.34□□□□□ -0.43
PTPN9-206ENST00000618819 A0A1B0GW15 77 aa12.33□□□□□ -0.43
PTPN9-206ENST00000618819 TMEM171Q8WVE6 324 aa12.33□□□□□ -0.43
PTPN9-206ENST00000618819 DEFB123Q8N688 67 aa12.33□□□□□ -0.44
PTPN9-206ENST00000618819 ZNF646O15015 1829 aaPredicted RBP12.33□□□□□ -0.44
PTPN9-206ENST00000618819 SPINK8P0C7L1 97 aa12.33□□□□□ -0.44
PTPN9-206ENST00000618819 ZNF658BQ4V348 819 aaPredicted RBP12.33□□□□□ -0.44
PTPN9-206ENST00000618819 GLMPQ8WWB7 406 aa12.33□□□□□ -0.44
PTPN9-206ENST00000618819 A0A0G2JLM5 398 aa12.33□□□□□ -0.44
PTPN9-206ENST00000618819 RPL23P62829 140 aaKnown RBP12.33□□□□□ -0.44
PTPN9-206ENST00000618819 DMRTC2Q8IXT2 367 aaPredicted RBP12.33□□□□□ -0.44
PTPN9-206ENST00000618819 DRAM1Q8N682 238 aa12.33□□□□□ -0.44
PTPN9-206ENST00000618819 A8MXK9 166 aa12.33□□□□□ -0.44
PTPN9-206ENST00000618819 C1QTNF9P0C862 333 aa12.33□□□□□ -0.44
PTPN9-206ENST00000618819 GATA2P23769 480 aaPredicted RBP12.33□□□□□ -0.44
PTPN9-206ENST00000618819 COL9A1P20849 921 aa12.33□□□□□ -0.44
PTPN9-206ENST00000618819 FOXL1Q12952 345 aa12.33□□□□□ -0.44
PTPN9-206ENST00000618819 CD300EQ496F6 205 aaPredicted RBP12.33□□□□□ -0.44
PTPN9-206ENST00000618819 DCTN5Q9BTE1 182 aa12.33□□□□□ -0.44
PTPN9-206ENST00000618819 CLEC7AQ9BXN2 247 aa12.33□□□□□ -0.44
PTPN9-206ENST00000618819 N4BP2Q86UW6 1770 aaPredicted RBP12.33□□□□□ -0.44
PTPN9-206ENST00000618819 IGKV1D-42A0A075B6H8 117 aa12.32□□□□□ -0.44
PTPN9-206ENST00000618819 NPIPB11E5RHQ5 1161 aa12.32□□□□□ -0.44
PTPN9-206ENST00000618819 TMEM42Q69YG0 159 aa12.32□□□□□ -0.44
PTPN9-206ENST00000618819 LIMS2Q7Z4I7 341 aa12.32□□□□□ -0.44
PTPN9-206ENST00000618819 TMEM52Q8NDY8 209 aa12.32□□□□□ -0.44
PTPN9-206ENST00000618819 MS4A6AQ9H2W1 248 aa12.32□□□□□ -0.44
PTPN9-206ENST00000618819 YAE1D1Q9NRH1 226 aa12.32□□□□□ -0.44
PTPN9-206ENST00000618819 CRIM1Q9NZV1 1036 aa12.32□□□□□ -0.44
PTPN9-206ENST00000618819 A0A087WWC5 75 aa12.32□□□□□ -0.44
PTPN9-206ENST00000618819 REPIN1Q9BWE0 567 aaKnown RBP12.32□□□□□ -0.44
PTPN9-206ENST00000618819 DLEU1O43261 78 aa12.32□□□□□ -0.44
PTPN9-206ENST00000618819 IFI27P40305 119 aaPredicted RBP12.32□□□□□ -0.44
PTPN9-206ENST00000618819 C1QL4Q86Z23 238 aa12.32□□□□□ -0.44
PTPN9-206ENST00000618819 TTTY12Q9BZ98 90 aa12.32□□□□□ -0.44
PTPN9-206ENST00000618819 HIST1H2BKO60814 126 aa12.32□□□□□ -0.44
PTPN9-206ENST00000618819 HIST1H2BJP06899 126 aa12.32□□□□□ -0.44
PTPN9-206ENST00000618819 PSG1P11464 419 aa12.32□□□□□ -0.44
PTPN9-206ENST00000618819 HIST1H2BOP23527 126 aa12.32□□□□□ -0.44
PTPN9-206ENST00000618819 HIST1H2BBP33778 126 aa12.32□□□□□ -0.44
PTPN9-206ENST00000618819 HIST1H2BDP58876 126 aa12.32□□□□□ -0.44
PTPN9-206ENST00000618819 STARD6P59095 220 aa12.32□□□□□ -0.44
PTPN9-206ENST00000618819 HIST1H2BCP62807 126 aa12.32□□□□□ -0.44
PTPN9-206ENST00000618819 HIST2H2BEQ16778 126 aa12.32□□□□□ -0.44
PTPN9-206ENST00000618819 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.32□□□□□ -0.44
PTPN9-206ENST00000618819 TMEM92Q6UXU6 159 aa12.32□□□□□ -0.44
PTPN9-206ENST00000618819 HIST1H2BHQ93079 126 aa12.32□□□□□ -0.44
PTPN9-206ENST00000618819 HIST1H2BNQ99877 126 aa12.32□□□□□ -0.44
PTPN9-206ENST00000618819 HIST1H2BMQ99879 126 aa12.32□□□□□ -0.44
PTPN9-206ENST00000618819 KIF13AQ9H1H9 1805 aa12.32□□□□□ -0.44
PTPN9-206ENST00000618819 TRBV5-3A0A0A0MS03 114 aa12.32□□□□□ -0.44
PTPN9-206ENST00000618819 CCL21O00585 134 aa12.32□□□□□ -0.44
PTPN9-206ENST00000618819 NUTF2P61970 127 aaKnown RBP12.32□□□□□ -0.44
PTPN9-206ENST00000618819 FAM27BQ5VT28 67 aa12.32□□□□□ -0.44
PTPN9-206ENST00000618819 GTSCR1Q86UQ5 136 aa12.32□□□□□ -0.44
PTPN9-206ENST00000618819 LOXL4Q96JB6 756 aa12.32□□□□□ -0.44
PTPN9-206ENST00000618819 GDF15Q99988 308 aa12.32□□□□□ -0.44
PTPN9-206ENST00000618819 CEACAM1P13688 526 aa12.32□□□□□ -0.44
PTPN9-206ENST00000618819 PLNP26678 52 aa12.32□□□□□ -0.44
PTPN9-206ENST00000618819 LINC01587Q99440 93 aa12.32□□□□□ -0.44
PTPN9-206ENST00000618819 RPP25Q9BUL9 199 aaKnown RBP12.32□□□□□ -0.44
PTPN9-206ENST00000618819 LAMTOR3Q9UHA4 124 aa12.32□□□□□ -0.44
PTPN9-206ENST00000618819 LGALS1P09382 135 aaKnown RBP12.31□□□□□ -0.44
PTPN9-206ENST00000618819 GATAD1Q8WUU5 269 aa12.31□□□□□ -0.44
PTPN9-206ENST00000618819 Q9H3A6 140 aa12.31□□□□□ -0.44
PTPN9-206ENST00000618819 CST9LQ9H4G1 147 aa12.31□□□□□ -0.44
PTPN9-206ENST00000618819 PPIFP30405 207 aaKnown RBP12.31□□□□□ -0.44
PTPN9-206ENST00000618819 MGST2Q99735 147 aa12.31□□□□□ -0.44
PTPN9-206ENST00000618819 PPIAL4CA0A0B4J2A2 164 aa12.31□□□□□ -0.44
PTPN9-206ENST00000618819 PPIAL4GP0DN37 164 aa12.31□□□□□ -0.44
PTPN9-206ENST00000618819 CRYBA2P53672 197 aa12.31□□□□□ -0.44
PTPN9-206ENST00000618819 HSD52Q0P140 79 aa12.31□□□□□ -0.44
PTPN9-206ENST00000618819 S100A7L2Q5SY68 101 aa12.31□□□□□ -0.44
PTPN9-206ENST00000618819 CENPVQ7Z7K6 275 aaPredicted RBP12.31□□□□□ -0.44
PTPN9-206ENST00000618819 CRPP02741 224 aa12.31□□□□□ -0.44
PTPN9-206ENST00000618819 GZMBP10144 247 aa12.31□□□□□ -0.44
PTPN9-206ENST00000618819 ST20Q9HBF5 79 aa12.31□□□□□ -0.44
PTPN9-206ENST00000618819 A0A0J9YW62 118 aa12.31□□□□□ -0.44
PTPN9-206ENST00000618819 TOMM40O96008 361 aa12.31□□□□□ -0.44
PTPN9-206ENST00000618819 GZMMP51124 257 aa12.31□□□□□ -0.44
PTPN9-206ENST00000618819 LINC00158P58513 81 aa12.31□□□□□ -0.44
PTPN9-206ENST00000618819 SFXN3Q9BWM7 321 aa12.31□□□□□ -0.44
PTPN9-206ENST00000618819 C9orf153Q5TBE3 101 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms