RNA–Protein interactions for RNA: ENST00000618056.4

PMS1-220, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-220ENST00000618056 KRTAP10-11P60412 298 aa19.22■□□□□ 0.67
PMS1-220ENST00000618056 RNASE10Q5GAN6 216 aaKnown RBP19.22■□□□□ 0.67
PMS1-220ENST00000618056 C9orf66Q5T8R8 295 aa19.22■□□□□ 0.67
PMS1-220ENST00000618056 ARRDC1Q8N5I2 433 aa19.22■□□□□ 0.67
PMS1-220ENST00000618056 TTC9CQ8N5M4 171 aa19.22■□□□□ 0.67
PMS1-220ENST00000618056 GDPD1Q8N9F7 314 aa19.22■□□□□ 0.67
PMS1-220ENST00000618056 IGHV4OR15-8A0A075B7B6 117 aa19.21■□□□□ 0.67
PMS1-220ENST00000618056 A0A087WW49 117 aa19.21■□□□□ 0.67
PMS1-220ENST00000618056 C13orf42A0A1B0GVH6 325 aa19.21■□□□□ 0.67
PMS1-220ENST00000618056 TEX22C9J3V5 150 aa19.21■□□□□ 0.67
PMS1-220ENST00000618056 S1PR2O95136 353 aa19.21■□□□□ 0.67
PMS1-220ENST00000618056 CD3DP04234 171 aa19.21■□□□□ 0.67
PMS1-220ENST00000618056 ZNF735P0CB33 412 aa19.21■□□□□ 0.67
PMS1-220ENST00000618056 DGCR2P98153 550 aa19.21■□□□□ 0.67
PMS1-220ENST00000618056 OXA1LQ15070 435 aa19.21■□□□□ 0.67
PMS1-220ENST00000618056 SLC38A6Q8IZM9 456 aa19.21■□□□□ 0.67
PMS1-220ENST00000618056 USMG5Q96IX5 58 aa19.21■□□□□ 0.67
PMS1-220ENST00000618056 FAM212BQ9NTI7 297 aaPredicted RBP19.21■□□□□ 0.67
PMS1-220ENST00000618056 CD74P04233 296 aa19.2■□□□□ 0.66
PMS1-220ENST00000618056 IFNA6P05013 189 aa19.2■□□□□ 0.66
PMS1-220ENST00000618056 S100GP29377 79 aa19.2■□□□□ 0.66
PMS1-220ENST00000618056 PYDC2Q56P42 97 aa19.2■□□□□ 0.66
PMS1-220ENST00000618056 SLC25A42Q86VD7 318 aa19.2■□□□□ 0.66
PMS1-220ENST00000618056 LHFPL1Q86WI0 220 aa19.2■□□□□ 0.66
PMS1-220ENST00000618056 TMEM229BQ8NBD8 167 aa19.2■□□□□ 0.66
PMS1-220ENST00000618056 DCUN1D4Q92564 292 aa19.2■□□□□ 0.66
PMS1-220ENST00000618056 HRASLSQ9HDD0 168 aa19.2■□□□□ 0.66
PMS1-220ENST00000618056 ZMAT5Q9UDW3 170 aaKnown RBP19.2■□□□□ 0.66
PMS1-220ENST00000618056 SEC14L6B5MCN3 397 aa19.19■□□□□ 0.66
PMS1-220ENST00000618056 E7EUB6 86 aa19.19■□□□□ 0.66
PMS1-220ENST00000618056 CTDSPLO15194 276 aa19.19■□□□□ 0.66
PMS1-220ENST00000618056 HLA-GP17693 338 aa19.19■□□□□ 0.66
PMS1-220ENST00000618056 TAS2R19P59542 299 aa19.19■□□□□ 0.66
PMS1-220ENST00000618056 CADM3Q8N126 398 aa19.19■□□□□ 0.66
PMS1-220ENST00000618056 SMIM4Q8WVI0 70 aa19.19■□□□□ 0.66
PMS1-220ENST00000618056 SLC2A9Q9NRM0 540 aa19.19■□□□□ 0.66
PMS1-220ENST00000618056 TRBV9A0A0B4J1U6 114 aa19.18■□□□□ 0.66
PMS1-220ENST00000618056 A0A1B0GW64 132 aa19.18■□□□□ 0.66
PMS1-220ENST00000618056 UPK2O00526 184 aa19.18■□□□□ 0.66
PMS1-220ENST00000618056 SLURP1P55000 103 aa19.18■□□□□ 0.66
PMS1-220ENST00000618056 IL18Q14116 193 aa19.18■□□□□ 0.66
PMS1-220ENST00000618056 PHLDA2Q53GA4 152 aa19.18■□□□□ 0.66
PMS1-220ENST00000618056 DMBX1Q8NFW5 382 aa19.18■□□□□ 0.66
PMS1-220ENST00000618056 DLX4Q92988 240 aaPredicted RBP19.18■□□□□ 0.66
PMS1-220ENST00000618056 TMEM140Q9NV12 185 aa19.18■□□□□ 0.66
PMS1-220ENST00000618056 ZNF257Q9Y2Q1 563 aa19.18■□□□□ 0.66
PMS1-220ENST00000618056 HMX3A6NHT5 357 aa19.17■□□□□ 0.66
PMS1-220ENST00000618056 MARCH11A6NNE9 402 aa19.17■□□□□ 0.66
PMS1-220ENST00000618056 OVOL1O14753 267 aa19.17■□□□□ 0.66
PMS1-220ENST00000618056 RBMXL2O75526 392 aaKnown RBP19.17■□□□□ 0.66
PMS1-220ENST00000618056 PTTG1O95997 202 aa19.17■□□□□ 0.66
PMS1-220ENST00000618056 ZNF585BQ52M93 769 aa19.17■□□□□ 0.66
PMS1-220ENST00000618056 ZNF343Q6P1L6 599 aa19.17■□□□□ 0.66
PMS1-220ENST00000618056 MRAPQ8TCY5 172 aa19.17■□□□□ 0.66
PMS1-220ENST00000618056 SOSTQ9BQB4 213 aa19.17■□□□□ 0.66
PMS1-220ENST00000618056 RANGRFQ9HD47 186 aaPredicted RBP19.17■□□□□ 0.66
PMS1-220ENST00000618056 FAM223BA6NKX1 122 aa19.16■□□□□ 0.66
PMS1-220ENST00000618056 NPIPB5A8MRT5 1133 aa19.16■□□□□ 0.66
PMS1-220ENST00000618056 IL7P13232 177 aa19.16■□□□□ 0.66
PMS1-220ENST00000618056 LPAR6P43657 344 aa19.16■□□□□ 0.66
PMS1-220ENST00000618056 INSL3P51460 131 aa19.16■□□□□ 0.66
PMS1-220ENST00000618056 ERVK-16P61578 105 aa19.16■□□□□ 0.66
PMS1-220ENST00000618056 FAM223AQ8IWN6 122 aa19.16■□□□□ 0.66
PMS1-220ENST00000618056 ZNF486Q96H40 463 aaPredicted RBP19.16■□□□□ 0.66
PMS1-220ENST00000618056 FYTTD1Q96QD9 318 aaKnown RBP19.16■□□□□ 0.66
PMS1-220ENST00000618056 TRAV3A0A0B4J244 114 aa19.16■□□□□ 0.66
PMS1-220ENST00000618056 DEFA5Q01523 94 aa19.16■□□□□ 0.66
PMS1-220ENST00000618056 STEAP1BQ6NZ63 245 aa19.16■□□□□ 0.66
PMS1-220ENST00000618056 TBC1D26Q86UD7 250 aa19.16■□□□□ 0.66
PMS1-220ENST00000618056 OR4D10Q8NGI6 311 aa19.16■□□□□ 0.66
PMS1-220ENST00000618056 CGB1A6NKQ9 187 aa19.15■□□□□ 0.66
PMS1-220ENST00000618056 CRYGCP07315 174 aa19.15■□□□□ 0.66
PMS1-220ENST00000618056 ZP3P21754 424 aa19.15■□□□□ 0.66
PMS1-220ENST00000618056 OR2B8PP59922 312 aa19.15■□□□□ 0.66
PMS1-220ENST00000618056 RND3P61587 244 aa19.15■□□□□ 0.66
PMS1-220ENST00000618056 RHOGP84095 191 aa19.15■□□□□ 0.66
PMS1-220ENST00000618056 K7EIL1 84 aa19.14■□□□□ 0.65
PMS1-220ENST00000618056 RAB3DO95716 219 aa19.14■□□□□ 0.65
PMS1-220ENST00000618056 PRH1P02810 166 aa19.14■□□□□ 0.65
PMS1-220ENST00000618056 MYOD1P15172 320 aa19.14■□□□□ 0.65
PMS1-220ENST00000618056 BAK1Q16611 211 aa19.14■□□□□ 0.65
PMS1-220ENST00000618056 KLK9Q2XQG4 91 aa19.14■□□□□ 0.65
PMS1-220ENST00000618056 TRIQKQ629K1 86 aa19.14■□□□□ 0.65
PMS1-220ENST00000618056 NECAP1Q8NC96 275 aa19.14■□□□□ 0.65
PMS1-220ENST00000618056 TERB2Q8NHR7 220 aa19.14■□□□□ 0.65
PMS1-220ENST00000618056 SRSF8Q9BRL6 282 aaKnown RBP19.14■□□□□ 0.65
PMS1-220ENST00000618056 COMMD5Q9GZQ3 224 aa19.14■□□□□ 0.65
PMS1-220ENST00000618056 KLK9Q9UKQ9 250 aa19.14■□□□□ 0.65
PMS1-220ENST00000618056 WI2-2373I1.2A0A1W2PRP0 233 aa19.13■□□□□ 0.65
PMS1-220ENST00000618056 ANKRD34BA5PLL1 514 aa19.13■□□□□ 0.65
PMS1-220ENST00000618056 KRASP01116 189 aa19.13■□□□□ 0.65
PMS1-220ENST00000618056 AREGP15514 252 aa19.13■□□□□ 0.65
PMS1-220ENST00000618056 PSMB6P28072 239 aa19.13■□□□□ 0.65
PMS1-220ENST00000618056 MEF2DQ14814 521 aa19.13■□□□□ 0.65
PMS1-220ENST00000618056 ZNF429Q86V71 674 aa19.13■□□□□ 0.65
PMS1-220ENST00000618056 PEF1Q9UBV8 284 aaKnown RBP19.13■□□□□ 0.65
PMS1-220ENST00000618056 GSTZ1O43708 216 aaPredicted RBP19.12■□□□□ 0.65
PMS1-220ENST00000618056 PGAM2P15259 253 aa19.12■□□□□ 0.65
PMS1-220ENST00000618056 RPA2P15927 270 aa19.12■□□□□ 0.65
PMS1-220ENST00000618056 CTRB1P17538 263 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms