RNA–Protein interactions for RNA: ENST00000617757.1

TARDBP-219, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 434 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-219ENST00000617757 CDC42EP3Q9UKI2 254 aa6.42□□□□□ -1.38
TARDBP-219ENST00000617757 PRNDQ9UKY0 176 aa6.42□□□□□ -1.38
TARDBP-219ENST00000617757 FOXA2Q9Y261 457 aaPredicted RBP6.42□□□□□ -1.38
TARDBP-219ENST00000617757 MOB4Q9Y3A3 225 aa6.42□□□□□ -1.38
TARDBP-219ENST00000617757 OR51B2Q9Y5P1 312 aa6.42□□□□□ -1.38
TARDBP-219ENST00000617757 ACANP16112 2415 aa6.42□□□□□ -1.38
TARDBP-219ENST00000617757 HIVEP1P15822 2718 aa6.41□□□□□ -1.38
TARDBP-219ENST00000617757 TRAV14DV4A0A0A6YYC5 116 aa6.41□□□□□ -1.38
TARDBP-219ENST00000617757 TEX50A0A1B0GTY4 177 aa6.41□□□□□ -1.38
TARDBP-219ENST00000617757 INAFM1C9JVW0 142 aa6.41□□□□□ -1.38
TARDBP-219ENST00000617757 E7EUB6 86 aa6.41□□□□□ -1.38
TARDBP-219ENST00000617757 G3V3Q6 166 aa6.41□□□□□ -1.38
TARDBP-219ENST00000617757 SMLR1H3BR10 107 aa6.41□□□□□ -1.38
TARDBP-219ENST00000617757 K7EPK0 472 aa6.41□□□□□ -1.38
TARDBP-219ENST00000617757 FGF16O43320 207 aa6.41□□□□□ -1.38
TARDBP-219ENST00000617757 MPC2O95563 127 aa6.41□□□□□ -1.38
TARDBP-219ENST00000617757 SCGB1D2O95969 90 aa6.41□□□□□ -1.38
TARDBP-219ENST00000617757 CA2P00918 260 aa6.41□□□□□ -1.38
TARDBP-219ENST00000617757 SRD5A1P18405 259 aa6.41□□□□□ -1.38
TARDBP-219ENST00000617757 PSMB6P28072 239 aa6.41□□□□□ -1.38
TARDBP-219ENST00000617757 MAS1LP35410 378 aa6.41□□□□□ -1.38
TARDBP-219ENST00000617757 HSPE1P61604 102 aaKnown RBP6.41□□□□□ -1.38
TARDBP-219ENST00000617757 SSBP2P81877 361 aaPredicted RBP6.41□□□□□ -1.38
TARDBP-219ENST00000617757 SCGB2A2Q13296 93 aa6.41□□□□□ -1.38
TARDBP-219ENST00000617757 LRRC37A5PQ49AS3 106 aa6.41□□□□□ -1.38
TARDBP-219ENST00000617757 Q5BKY6 102 aa6.41□□□□□ -1.38
TARDBP-219ENST00000617757 TMEM86BQ8N661 226 aa6.41□□□□□ -1.38
TARDBP-219ENST00000617757 C5orf56Q8N8D9 126 aa6.41□□□□□ -1.38
TARDBP-219ENST00000617757 OR2T35Q8NGX2 323 aa6.41□□□□□ -1.38
TARDBP-219ENST00000617757 OR52E5Q8NH55 327 aa6.41□□□□□ -1.38
TARDBP-219ENST00000617757 SSMEM1Q8WWF3 244 aa6.41□□□□□ -1.38
TARDBP-219ENST00000617757 RASL11BQ9BPW5 248 aa6.41□□□□□ -1.38
TARDBP-219ENST00000617757 COMMD5Q9GZQ3 224 aa6.41□□□□□ -1.38
TARDBP-219ENST00000617757 MAGT1Q9H0U3 335 aa6.41□□□□□ -1.38
TARDBP-219ENST00000617757 RBKSQ9H477 322 aa6.41□□□□□ -1.38
TARDBP-219ENST00000617757 ZFP57Q9NU63 452 aa6.41□□□□□ -1.38
TARDBP-219ENST00000617757 FKBP11Q9NYL4 201 aa6.41□□□□□ -1.38
TARDBP-219ENST00000617757 VPREB3Q9UKI3 123 aa6.41□□□□□ -1.38
TARDBP-219ENST00000617757 RCL1Q9Y2P8 373 aaKnown RBP6.41□□□□□ -1.38
TARDBP-219ENST00000617757 ZNF257Q9Y2Q1 563 aa6.41□□□□□ -1.38
TARDBP-219ENST00000617757 LSM5Q9Y4Y9 91 aaKnown RBP6.41□□□□□ -1.38
TARDBP-219ENST00000617757 POMT1Q9Y6A1 747 aa6.41□□□□□ -1.38
TARDBP-219ENST00000617757 PLXNB1O43157 2135 aa6.41□□□□□ -1.38
TARDBP-219ENST00000617757 TNCP24821 2201 aa6.4□□□□□ -1.38
TARDBP-219ENST00000617757 BTBD17A6NE02 478 aa6.4□□□□□ -1.38
TARDBP-219ENST00000617757 CGB1A6NKQ9 187 aa6.4□□□□□ -1.38
TARDBP-219ENST00000617757 H0YIZ8 118 aa6.4□□□□□ -1.38
TARDBP-219ENST00000617757 SYNGR2O43760 224 aa6.4□□□□□ -1.38
TARDBP-219ENST00000617757 CHST1O43916 411 aa6.4□□□□□ -1.38
TARDBP-219ENST00000617757 MED6O75586 246 aa6.4□□□□□ -1.38
TARDBP-219ENST00000617757 IFNA17P01571 189 aa6.4□□□□□ -1.38
TARDBP-219ENST00000617757 HLA-DRB1P01911 266 aa6.4□□□□□ -1.38
TARDBP-219ENST00000617757 OPN1MWP04001 364 aa6.4□□□□□ -1.38
TARDBP-219ENST00000617757 AMY1AP04745 511 aa6.4□□□□□ -1.38
TARDBP-219ENST00000617757 OPN1MW2P0DN77 364 aa6.4□□□□□ -1.38
TARDBP-219ENST00000617757 OPN1MW3P0DN78 364 aa6.4□□□□□ -1.38
TARDBP-219ENST00000617757 S100A10P60903 97 aa6.4□□□□□ -1.38
TARDBP-219ENST00000617757 SPCS3P61009 180 aa6.4□□□□□ -1.38
TARDBP-219ENST00000617757 POLR2GP62487 172 aaKnown RBP eCLIP6.4□□□□□ -1.38
TARDBP-219ENST00000617757 PRCDQ00LT1 54 aa6.4□□□□□ -1.38
TARDBP-219ENST00000617757 TNFRSF9Q07011 255 aa6.4□□□□□ -1.38
TARDBP-219ENST00000617757 FGL1Q08830 312 aa6.4□□□□□ -1.38
TARDBP-219ENST00000617757 TNXAQ16473 311 aa6.4□□□□□ -1.38
TARDBP-219ENST00000617757 PDLIM3Q53GG5 364 aaPredicted RBP6.4□□□□□ -1.38
TARDBP-219ENST00000617757 PRSS54Q6PEW0 395 aa6.4□□□□□ -1.38
TARDBP-219ENST00000617757 OR1L8Q8NGR8 309 aa6.4□□□□□ -1.38
TARDBP-219ENST00000617757 OR5B3Q8NH48 314 aa6.4□□□□□ -1.38
TARDBP-219ENST00000617757 C11orf1Q9H5F2 150 aa6.4□□□□□ -1.38
TARDBP-219ENST00000617757 NDUFA4L2Q9NRX3 87 aa6.4□□□□□ -1.38
TARDBP-219ENST00000617757 TNFRSF19Q9NS68 423 aa6.4□□□□□ -1.38
TARDBP-219ENST00000617757 OR5AC2Q9NZP5 309 aa6.4□□□□□ -1.38
TARDBP-219ENST00000617757 CACFD1Q9UGQ2 172 aa6.4□□□□□ -1.38
TARDBP-219ENST00000617757 NOTCH2Q04721 2471 aa6.39□□□□□ -1.39
TARDBP-219ENST00000617757 IGHV7-81A0A0B4J1V7 117 aa6.39□□□□□ -1.39
TARDBP-219ENST00000617757 A0A1B0GW64 132 aa6.39□□□□□ -1.39
TARDBP-219ENST00000617757 SH2D7A6NKC9 451 aaPredicted RBP6.39□□□□□ -1.39
TARDBP-219ENST00000617757 CEBPZOSA8MTT3 80 aa6.39□□□□□ -1.39
TARDBP-219ENST00000617757 WRBO00258 174 aa6.39□□□□□ -1.39
TARDBP-219ENST00000617757 SSSCA1O60232 199 aa6.39□□□□□ -1.39
TARDBP-219ENST00000617757 DEDDO75618 318 aa6.39□□□□□ -1.39
TARDBP-219ENST00000617757 ACTL6BO94805 426 aa6.39□□□□□ -1.39
TARDBP-219ENST00000617757 CNIH1O95406 144 aa6.39□□□□□ -1.39
TARDBP-219ENST00000617757 C1QBP02746 253 aa6.39□□□□□ -1.39
TARDBP-219ENST00000617757 RLN2P04090 185 aa6.39□□□□□ -1.39
TARDBP-219ENST00000617757 SLC25A4P12235 298 aa6.39□□□□□ -1.39
TARDBP-219ENST00000617757 LYL1P12980 280 aa6.39□□□□□ -1.39
TARDBP-219ENST00000617757 RPL27AP46776 148 aaKnown RBP6.39□□□□□ -1.39
TARDBP-219ENST00000617757 COMPP49747 757 aaPredicted RBP6.39□□□□□ -1.39
TARDBP-219ENST00000617757 PAX9P55771 341 aa6.39□□□□□ -1.39
TARDBP-219ENST00000617757 GNB1P62873 340 aa6.39□□□□□ -1.39
TARDBP-219ENST00000617757 CX3CL1P78423 397 aa6.39□□□□□ -1.39
TARDBP-219ENST00000617757 SPINK9Q5DT21 86 aa6.39□□□□□ -1.39
TARDBP-219ENST00000617757 C10orf55Q5SWW7 151 aa6.39□□□□□ -1.39
TARDBP-219ENST00000617757 C11orf87Q6NUJ2 197 aa6.39□□□□□ -1.39
TARDBP-219ENST00000617757 ZNF562Q6V9R5 426 aa6.39□□□□□ -1.39
TARDBP-219ENST00000617757 RBMS3Q6XE24 437 aaKnown RBP6.39□□□□□ -1.39
TARDBP-219ENST00000617757 OR11H4Q8NGC9 324 aa6.39□□□□□ -1.39
TARDBP-219ENST00000617757 THAP6Q8TBB0 222 aa6.39□□□□□ -1.39
TARDBP-219ENST00000617757 DTD1Q8TEA8 209 aa6.39□□□□□ -1.39
TARDBP-219ENST00000617757 SRSF12Q8WXF0 261 aaKnown RBP6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms