RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 COMPP49747 757 aaPredicted RBP12.31□□□□□ -0.44
PCDHGC3-204ENST00000617222 OR2B8PP59922 312 aa12.31□□□□□ -0.44
PCDHGC3-204ENST00000617222 FOXL1Q12952 345 aa12.31□□□□□ -0.44
PCDHGC3-204ENST00000617222 Q6ZRM9 215 aa12.31□□□□□ -0.44
PCDHGC3-204ENST00000617222 FAM219AQ8IW50 185 aa12.31□□□□□ -0.44
PCDHGC3-204ENST00000617222 MITD1Q8WV92 249 aa12.31□□□□□ -0.44
PCDHGC3-204ENST00000617222 LSM10Q969L4 123 aaKnown RBP12.31□□□□□ -0.44
PCDHGC3-204ENST00000617222 GPN1Q9HCN4 374 aaPredicted RBP12.31□□□□□ -0.44
PCDHGC3-204ENST00000617222 PRNDQ9UKY0 176 aa12.31□□□□□ -0.44
PCDHGC3-204ENST00000617222 RNF114Q9Y508 228 aa12.31□□□□□ -0.44
PCDHGC3-204ENST00000617222 WSB1Q9Y6I7 421 aa12.31□□□□□ -0.44
PCDHGC3-204ENST00000617222 ATRQ13535 2644 aa12.3□□□□□ -0.44
PCDHGC3-204ENST00000617222 PIGBOS1A0A0B4J2F0 54 aa12.3□□□□□ -0.44
PCDHGC3-204ENST00000617222 MSGN1A6NI15 193 aa12.3□□□□□ -0.44
PCDHGC3-204ENST00000617222 HAX1O00165 279 aa12.3□□□□□ -0.44
PCDHGC3-204ENST00000617222 PLXNB1O43157 2135 aa12.3□□□□□ -0.44
PCDHGC3-204ENST00000617222 PRAF2O60831 178 aa12.3□□□□□ -0.44
PCDHGC3-204ENST00000617222 RBMXL2O75526 392 aaKnown RBP12.3□□□□□ -0.44
PCDHGC3-204ENST00000617222 VDAC1P21796 283 aa12.3□□□□□ -0.44
PCDHGC3-204ENST00000617222 RPL27AP46776 148 aaKnown RBP12.3□□□□□ -0.44
PCDHGC3-204ENST00000617222 STPG2Q8N412 459 aa12.3□□□□□ -0.44
PCDHGC3-204ENST00000617222 C12orf45Q8N5I9 185 aaPredicted RBP12.3□□□□□ -0.44
PCDHGC3-204ENST00000617222 UXS1Q8NBZ7 420 aa12.3□□□□□ -0.44
PCDHGC3-204ENST00000617222 SRSF12Q8WXF0 261 aaKnown RBP12.3□□□□□ -0.44
PCDHGC3-204ENST00000617222 FYTTD1Q96QD9 318 aaKnown RBP12.3□□□□□ -0.44
PCDHGC3-204ENST00000617222 PHB2Q99623 299 aa12.3□□□□□ -0.44
PCDHGC3-204ENST00000617222 COMMD5Q9GZQ3 224 aa12.3□□□□□ -0.44
PCDHGC3-204ENST00000617222 OR51B2Q9Y5P1 312 aa12.3□□□□□ -0.44
PCDHGC3-204ENST00000617222 TEX50A0A1B0GTY4 177 aa12.29□□□□□ -0.44
PCDHGC3-204ENST00000617222 A0A1B0GUS0 222 aa12.29□□□□□ -0.44
PCDHGC3-204ENST00000617222 DUXBA0A1W2PPF3 345 aa12.29□□□□□ -0.44
PCDHGC3-204ENST00000617222 DBX1A6NMT0 343 aa12.29□□□□□ -0.44
PCDHGC3-204ENST00000617222 C15orf61A6NNL5 157 aa12.29□□□□□ -0.44
PCDHGC3-204ENST00000617222 E7EUB6 86 aa12.29□□□□□ -0.44
PCDHGC3-204ENST00000617222 G3V318 75 aa12.29□□□□□ -0.44
PCDHGC3-204ENST00000617222 IGF1P05019 195 aa12.29□□□□□ -0.44
PCDHGC3-204ENST00000617222 OXA1LQ15070 435 aa12.29□□□□□ -0.44
PCDHGC3-204ENST00000617222 ECSCRQ19T08 205 aa12.29□□□□□ -0.44
PCDHGC3-204ENST00000617222 AWAT1Q58HT5 328 aa12.29□□□□□ -0.44
PCDHGC3-204ENST00000617222 NMSQ5H8A3 153 aa12.29□□□□□ -0.44
PCDHGC3-204ENST00000617222 GGNBP1Q5YKI7 109 aa12.29□□□□□ -0.44
PCDHGC3-204ENST00000617222 CENPVQ7Z7K6 275 aaPredicted RBP12.29□□□□□ -0.44
PCDHGC3-204ENST00000617222 LFNGQ8NES3 379 aa12.29□□□□□ -0.44
PCDHGC3-204ENST00000617222 SGMS2Q8NHU3 365 aa12.29□□□□□ -0.44
PCDHGC3-204ENST00000617222 QTRT1Q9BXR0 403 aaKnown RBP12.29□□□□□ -0.44
PCDHGC3-204ENST00000617222 WNT10AQ9GZT5 417 aa12.29□□□□□ -0.44
PCDHGC3-204ENST00000617222 TMEM14BQ9NUH8 114 aa12.29□□□□□ -0.44
PCDHGC3-204ENST00000617222 FKBP11Q9NYL4 201 aa12.29□□□□□ -0.44
PCDHGC3-204ENST00000617222 CACNG5Q9UF02 275 aa12.29□□□□□ -0.44
PCDHGC3-204ENST00000617222 TMED3Q9Y3Q3 217 aa12.29□□□□□ -0.44
PCDHGC3-204ENST00000617222 TNCP24821 2201 aa12.29□□□□□ -0.44
PCDHGC3-204ENST00000617222 TRAV41A0A0B4J266 112 aa12.28□□□□□ -0.44
PCDHGC3-204ENST00000617222 ADAP1O75689 374 aa12.28□□□□□ -0.44
PCDHGC3-204ENST00000617222 APELAP0DMC3 54 aa12.28□□□□□ -0.44
PCDHGC3-204ENST00000617222 PROK1P58294 105 aa12.28□□□□□ -0.44
PCDHGC3-204ENST00000617222 TMEM267Q0VDI3 215 aaPredicted RBP12.28□□□□□ -0.44
PCDHGC3-204ENST00000617222 UNQ5815/PRO19632Q6UWF5 114 aa12.28□□□□□ -0.44
PCDHGC3-204ENST00000617222 KLHDC1Q8N7A1 406 aa12.28□□□□□ -0.44
PCDHGC3-204ENST00000617222 OR1L8Q8NGR8 309 aa12.28□□□□□ -0.44
PCDHGC3-204ENST00000617222 CHPT1Q8WUD6 406 aa12.28□□□□□ -0.44
PCDHGC3-204ENST00000617222 HINT2Q9BX68 163 aa12.28□□□□□ -0.44
PCDHGC3-204ENST00000617222 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.28□□□□□ -0.44
PCDHGC3-204ENST00000617222 FOXA2Q9Y261 457 aaPredicted RBP12.28□□□□□ -0.44
PCDHGC3-204ENST00000617222 A0A1B0GW64 132 aa12.27□□□□□ -0.45
PCDHGC3-204ENST00000617222 HMX3A6NHT5 357 aa12.27□□□□□ -0.45
PCDHGC3-204ENST00000617222 SNRPGP15A8MWD9 76 aa12.27□□□□□ -0.45
PCDHGC3-204ENST00000617222 ST8SIA3O43173 380 aa12.27□□□□□ -0.45
PCDHGC3-204ENST00000617222 IFNA21P01568 189 aa12.27□□□□□ -0.45
PCDHGC3-204ENST00000617222 FGF2P09038 288 aa12.27□□□□□ -0.45
PCDHGC3-204ENST00000617222 SULT1A3P0DMM9 295 aa12.27□□□□□ -0.45
PCDHGC3-204ENST00000617222 SULT1A4P0DMN0 295 aa12.27□□□□□ -0.45
PCDHGC3-204ENST00000617222 CRIP2P52943 208 aaPredicted RBP12.27□□□□□ -0.45
PCDHGC3-204ENST00000617222 HSPE1P61604 102 aaKnown RBP12.27□□□□□ -0.45
PCDHGC3-204ENST00000617222 C10orf99Q6UWK7 81 aa12.27□□□□□ -0.45
PCDHGC3-204ENST00000617222 ZNF329Q86UD4 541 aa12.27□□□□□ -0.45
PCDHGC3-204ENST00000617222 SPIN2AQ99865 258 aa12.27□□□□□ -0.45
PCDHGC3-204ENST00000617222 SPIN2BQ9BPZ2 258 aa12.27□□□□□ -0.45
PCDHGC3-204ENST00000617222 ZNF580Q9UK33 172 aa12.27□□□□□ -0.45
PCDHGC3-204ENST00000617222 A0A1B0GU03 582 aa12.26□□□□□ -0.45
PCDHGC3-204ENST00000617222 PSMB11A5LHX3 300 aa12.26□□□□□ -0.45
PCDHGC3-204ENST00000617222 CGB1A6NKQ9 187 aa12.26□□□□□ -0.45
PCDHGC3-204ENST00000617222 TEX22C9J3V5 150 aa12.26□□□□□ -0.45
PCDHGC3-204ENST00000617222 IFNA17P01571 189 aa12.26□□□□□ -0.45
PCDHGC3-204ENST00000617222 TRAPPC2P0DI81 140 aa12.26□□□□□ -0.45
PCDHGC3-204ENST00000617222 TRAPPC2BP0DI82 140 aa12.26□□□□□ -0.45
PCDHGC3-204ENST00000617222 SMCO1Q147U7 214 aa12.26□□□□□ -0.45
PCDHGC3-204ENST00000617222 TATDN3Q17R31 274 aa12.26□□□□□ -0.45
PCDHGC3-204ENST00000617222 AKIRIN2Q53H80 203 aa12.26□□□□□ -0.45
PCDHGC3-204ENST00000617222 ASPHD1Q5U4P2 390 aa12.26□□□□□ -0.45
PCDHGC3-204ENST00000617222 THOC7Q6I9Y2 204 aaKnown RBP12.26□□□□□ -0.45
PCDHGC3-204ENST00000617222 ZNF429Q86V71 674 aa12.26□□□□□ -0.45
PCDHGC3-204ENST00000617222 OR5T1Q8NG75 326 aa12.26□□□□□ -0.45
PCDHGC3-204ENST00000617222 OR5B3Q8NH48 314 aa12.26□□□□□ -0.45
PCDHGC3-204ENST00000617222 MDFIQ99750 246 aa12.26□□□□□ -0.45
PCDHGC3-204ENST00000617222 GON7Q9BXV9 100 aa12.26□□□□□ -0.45
PCDHGC3-204ENST00000617222 NDUFA4L2Q9NRX3 87 aa12.26□□□□□ -0.45
PCDHGC3-204ENST00000617222 PPIFP30405 207 aaKnown RBP12.25□□□□□ -0.45
PCDHGC3-204ENST00000617222 SLC35B1P78383 322 aa12.25□□□□□ -0.45
PCDHGC3-204ENST00000617222 C19orf54Q5BKX5 351 aa12.25□□□□□ -0.45
PCDHGC3-204ENST00000617222 SPINK9Q5DT21 86 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms