RNA–Protein interactions for RNA: ENST00000615665.4

SSBP2-220, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5 BASIC

Gene SSBP2, Length 4,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-220ENST00000615665 MBD3L1Q8WWY6 194 aa11.71□□□□□ -0.53
SSBP2-220ENST00000615665 PCGF1Q9BSM1 259 aa11.71□□□□□ -0.53
SSBP2-220ENST00000615665 ZNF355PQ9NSJ1 428 aa11.71□□□□□ -0.53
SSBP2-220ENST00000615665 HELTA6NFD8 242 aa11.71□□□□□ -0.53
SSBP2-220ENST00000615665 SGMS2Q8NHU3 365 aa11.71□□□□□ -0.53
SSBP2-220ENST00000615665 VN1R17PQ8TDU5 208 aa11.71□□□□□ -0.53
SSBP2-220ENST00000615665 MRPL37Q9BZE1 423 aaKnown RBP11.71□□□□□ -0.53
SSBP2-220ENST00000615665 FGF23Q9GZV9 251 aaPredicted RBP11.71□□□□□ -0.53
SSBP2-220ENST00000615665 HIF1ANQ9NWT6 349 aa11.71□□□□□ -0.53
SSBP2-220ENST00000615665 RNF24Q9Y225 148 aa11.71□□□□□ -0.53
SSBP2-220ENST00000615665 SLC25A15Q9Y619 301 aa11.71□□□□□ -0.53
SSBP2-220ENST00000615665 TMEM50AO95807 157 aa11.71□□□□□ -0.54
SSBP2-220ENST00000615665 OR4A47Q6IF82 309 aa11.71□□□□□ -0.54
SSBP2-220ENST00000615665 CD177Q8N6Q3 437 aa11.71□□□□□ -0.54
SSBP2-220ENST00000615665 GGACTQ9BVM4 153 aa11.71□□□□□ -0.54
SSBP2-220ENST00000615665 SDF2L1Q9HCN8 221 aa11.71□□□□□ -0.54
SSBP2-220ENST00000615665 ELOVL5Q9NYP7 299 aa11.71□□□□□ -0.54
SSBP2-220ENST00000615665 INSIG2Q9Y5U4 225 aa11.71□□□□□ -0.54
SSBP2-220ENST00000615665 TCF21O43680 179 aa11.7□□□□□ -0.54
SSBP2-220ENST00000615665 S100A7P31151 101 aa11.7□□□□□ -0.54
SSBP2-220ENST00000615665 SRP14P37108 136 aaKnown RBP11.7□□□□□ -0.54
SSBP2-220ENST00000615665 GAMTQ14353 236 aa11.7□□□□□ -0.54
SSBP2-220ENST00000615665 Q6ZN92 141 aa11.7□□□□□ -0.54
SSBP2-220ENST00000615665 Q8WTZ3 238 aa11.7□□□□□ -0.54
SSBP2-220ENST00000615665 CACNA1BQ00975 2339 aa11.7□□□□□ -0.54
SSBP2-220ENST00000615665 TRAV1-1A0A0B4J248 108 aa11.7□□□□□ -0.54
SSBP2-220ENST00000615665 CA2P00918 260 aa11.7□□□□□ -0.54
SSBP2-220ENST00000615665 SLC25A5P05141 298 aaKnown RBP11.7□□□□□ -0.54
SSBP2-220ENST00000615665 ZNF585BQ52M93 769 aa11.7□□□□□ -0.54
SSBP2-220ENST00000615665 OR4X1Q8NH49 305 aa11.7□□□□□ -0.54
SSBP2-220ENST00000615665 ATG101Q9BSB4 218 aa11.7□□□□□ -0.54
SSBP2-220ENST00000615665 SEBOXQ9HB31 216 aaPredicted RBP11.7□□□□□ -0.54
SSBP2-220ENST00000615665 RBP4P02753 201 aa11.7□□□□□ -0.54
SSBP2-220ENST00000615665 EGR1P18146 543 aa11.7□□□□□ -0.54
SSBP2-220ENST00000615665 BLNKQ8WV28 456 aa11.7□□□□□ -0.54
SSBP2-220ENST00000615665 CDX1P47902 265 aaPredicted RBP11.7□□□□□ -0.54
SSBP2-220ENST00000615665 PKIAP61925 76 aa11.7□□□□□ -0.54
SSBP2-220ENST00000615665 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.69□□□□□ -0.54
SSBP2-220ENST00000615665 TM4SF5O14894 197 aa11.69□□□□□ -0.54
SSBP2-220ENST00000615665 OR9G9P0C7N8 305 aa11.69□□□□□ -0.54
SSBP2-220ENST00000615665 TRGC1P0CF51 173 aa11.69□□□□□ -0.54
SSBP2-220ENST00000615665 TMEM14EPQ6UXP3 125 aa11.69□□□□□ -0.54
SSBP2-220ENST00000615665 ZNF600Q6ZNG1 722 aa11.69□□□□□ -0.54
SSBP2-220ENST00000615665 STPG3Q8N7X2 389 aa11.69□□□□□ -0.54
SSBP2-220ENST00000615665 OR1B1Q8NGR6 318 aa11.69□□□□□ -0.54
SSBP2-220ENST00000615665 RAB1CQ92928 201 aa11.69□□□□□ -0.54
SSBP2-220ENST00000615665 SPRY4Q9C004 299 aa11.69□□□□□ -0.54
SSBP2-220ENST00000615665 RAB1BQ9H0U4 201 aa11.69□□□□□ -0.54
SSBP2-220ENST00000615665 RBFOX2O43251 390 aaKnown RBP eCLIP11.69□□□□□ -0.54
SSBP2-220ENST00000615665 FOLR2P14207 255 aa11.69□□□□□ -0.54
SSBP2-220ENST00000615665 DDTP30046 118 aa11.69□□□□□ -0.54
SSBP2-220ENST00000615665 ERVK11-1P61568 191 aa11.69□□□□□ -0.54
SSBP2-220ENST00000615665 C10orf113Q5VZT2 155 aa11.69□□□□□ -0.54
SSBP2-220ENST00000615665 RNASEKQ6P5S7 137 aaKnown RBP11.69□□□□□ -0.54
SSBP2-220ENST00000615665 C11orf42Q8N5U0 333 aa11.69□□□□□ -0.54
SSBP2-220ENST00000615665 ABHD17AQ96GS6 310 aa11.69□□□□□ -0.54
SSBP2-220ENST00000615665 CRISP2P16562 243 aa11.69□□□□□ -0.54
SSBP2-220ENST00000615665 C10orf91Q5T1B1 145 aa11.69□□□□□ -0.54
SSBP2-220ENST00000615665 LINC00469Q8N7U9 141 aa11.69□□□□□ -0.54
SSBP2-220ENST00000615665 OR8B3Q8NGG8 313 aa11.69□□□□□ -0.54
SSBP2-220ENST00000615665 OR8B2Q96RD0 313 aa11.69□□□□□ -0.54
SSBP2-220ENST00000615665 TBX15Q96SF7 602 aa11.69□□□□□ -0.54
SSBP2-220ENST00000615665 SRD5A3Q9H8P0 318 aa11.69□□□□□ -0.54
SSBP2-220ENST00000615665 WASHC3Q9Y3C0 194 aa11.69□□□□□ -0.54
SSBP2-220ENST00000615665 EML6Q6ZMW3 1958 aa11.69□□□□□ -0.54
SSBP2-220ENST00000615665 SAA2-SAA4A0A096LPE2 208 aa11.68□□□□□ -0.54
SSBP2-220ENST00000615665 SAA2P0DJI9 122 aaPredicted RBP11.68□□□□□ -0.54
SSBP2-220ENST00000615665 IGHV3-72A0A0B4J1Y9 119 aa11.68□□□□□ -0.54
SSBP2-220ENST00000615665 MBD3L4A6NDZ8 208 aaPredicted RBP11.68□□□□□ -0.54
SSBP2-220ENST00000615665 MBD3L3A6NE82 208 aaPredicted RBP11.68□□□□□ -0.54
SSBP2-220ENST00000615665 MBD3L5A6NJ08 208 aaPredicted RBP11.68□□□□□ -0.54
SSBP2-220ENST00000615665 ZNF253O75346 499 aa11.68□□□□□ -0.54
SSBP2-220ENST00000615665 IL6RP08887 468 aaPredicted RBP11.68□□□□□ -0.54
SSBP2-220ENST00000615665 MC5RP33032 325 aa11.68□□□□□ -0.54
SSBP2-220ENST00000615665 MBD3L2Q8NHZ7 208 aaPredicted RBP11.68□□□□□ -0.54
SSBP2-220ENST00000615665 CBLN4Q9NTU7 201 aa11.68□□□□□ -0.54
SSBP2-220ENST00000615665 DLL1O00548 723 aa11.68□□□□□ -0.54
SSBP2-220ENST00000615665 CHEK1O14757 476 aa11.68□□□□□ -0.54
SSBP2-220ENST00000615665 GATCO43716 136 aaKnown RBP11.68□□□□□ -0.54
SSBP2-220ENST00000615665 APELAP0DMC3 54 aa11.68□□□□□ -0.54
SSBP2-220ENST00000615665 PAX9P55771 341 aa11.68□□□□□ -0.54
SSBP2-220ENST00000615665 TCTAP57738 103 aa11.68□□□□□ -0.54
SSBP2-220ENST00000615665 GNB2P62879 340 aa11.68□□□□□ -0.54
SSBP2-220ENST00000615665 SPSB3Q6PJ21 355 aa11.68□□□□□ -0.54
SSBP2-220ENST00000615665 PDPNQ86YL7 162 aa11.68□□□□□ -0.54
SSBP2-220ENST00000615665 RNF115Q9Y4L5 304 aa11.68□□□□□ -0.54
SSBP2-220ENST00000615665 A0A1W2PNU3 283 aaPredicted RBP11.68□□□□□ -0.54
SSBP2-220ENST00000615665 SELLP14151 372 aa11.68□□□□□ -0.54
SSBP2-220ENST00000615665 USF1P22415 310 aaPredicted RBP11.68□□□□□ -0.54
SSBP2-220ENST00000615665 BSPH1Q075Z2 132 aa11.68□□□□□ -0.54
SSBP2-220ENST00000615665 CRIP3Q6Q6R5 217 aa11.68□□□□□ -0.54
SSBP2-220ENST00000615665 PQLC2Q6ZP29 291 aa11.68□□□□□ -0.54
SSBP2-220ENST00000615665 SERTM2A0A1B0GWG4 89 aa11.67□□□□□ -0.54
SSBP2-220ENST00000615665 BMPR1BO00238 502 aa11.67□□□□□ -0.54
SSBP2-220ENST00000615665 VENTXO95231 258 aa11.67□□□□□ -0.54
SSBP2-220ENST00000615665 ARL16Q0P5N6 197 aa11.67□□□□□ -0.54
SSBP2-220ENST00000615665 SPNS3Q6ZMD2 512 aa11.67□□□□□ -0.54
SSBP2-220ENST00000615665 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.67□□□□□ -0.54
SSBP2-220ENST00000615665 CCL21O00585 134 aa11.67□□□□□ -0.54
SSBP2-220ENST00000615665 LINC00869P0C866 280 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 145.7 ms