RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 IGKV3-15P01624 115 aa8.14□□□□□ -1.11
TNFRSF9-204ENST00000615230 MORN2Q502X0 79 aa8.14□□□□□ -1.11
TNFRSF9-204ENST00000615230 TEX261Q6UWH6 196 aa8.14□□□□□ -1.11
TNFRSF9-204ENST00000615230 HEPN1Q6WQI6 88 aa8.14□□□□□ -1.11
TNFRSF9-204ENST00000615230 ARL2-SNX15V9GYD0 113 aa8.14□□□□□ -1.11
TNFRSF9-204ENST00000615230 SMUG1Q53HV7 270 aa8.14□□□□□ -1.11
TNFRSF9-204ENST00000615230 LEAP2Q969E1 77 aa8.14□□□□□ -1.11
TNFRSF9-204ENST00000615230 C1QTNF4Q9BXJ3 329 aa8.14□□□□□ -1.11
TNFRSF9-204ENST00000615230 TRBV6-7A0A0A0MS04 114 aa8.14□□□□□ -1.11
TNFRSF9-204ENST00000615230 CRYBA2P53672 197 aa8.14□□□□□ -1.11
TNFRSF9-204ENST00000615230 Q1RN00 199 aa8.14□□□□□ -1.11
TNFRSF9-204ENST00000615230 CLEC19AQ6UXS0 136 aa8.14□□□□□ -1.11
TNFRSF9-204ENST00000615230 NABP1Q96AH0 204 aa8.14□□□□□ -1.11
TNFRSF9-204ENST00000615230 IL36RNQ9UBH0 155 aa8.14□□□□□ -1.11
TNFRSF9-204ENST00000615230 TRGV11A0A075B6L2 103 aa8.13□□□□□ -1.11
TNFRSF9-204ENST00000615230 SAA2-SAA4A0A096LPE2 208 aa8.13□□□□□ -1.11
TNFRSF9-204ENST00000615230 IL6RP08887 468 aaPredicted RBP8.13□□□□□ -1.11
TNFRSF9-204ENST00000615230 SAA2P0DJI9 122 aaPredicted RBP8.13□□□□□ -1.11
TNFRSF9-204ENST00000615230 RNASEKQ6P5S7 137 aaKnown RBP8.13□□□□□ -1.11
TNFRSF9-204ENST00000615230 DUX3Q96PT4 197 aa8.13□□□□□ -1.11
TNFRSF9-204ENST00000615230 ALKBH7Q9BT30 221 aaPredicted RBP8.13□□□□□ -1.11
TNFRSF9-204ENST00000615230 IGKV1D-43A0A0B4J1Z2 117 aa8.13□□□□□ -1.11
TNFRSF9-204ENST00000615230 ETV2O00321 342 aaPredicted RBP8.13□□□□□ -1.11
TNFRSF9-204ENST00000615230 FCN1O00602 326 aa8.13□□□□□ -1.11
TNFRSF9-204ENST00000615230 PTBP3O95758 552 aaKnown RBP8.13□□□□□ -1.11
TNFRSF9-204ENST00000615230 HIST1H1AQ02539 215 aaPredicted RBP8.13□□□□□ -1.11
TNFRSF9-204ENST00000615230 ZNF474Q6S9Z5 364 aaPredicted RBP8.13□□□□□ -1.11
TNFRSF9-204ENST00000615230 DHRS11Q6UWP2 260 aa8.13□□□□□ -1.11
TNFRSF9-204ENST00000615230 TAF15Q92804 592 aaKnown RBP eCLIP8.13□□□□□ -1.11
TNFRSF9-204ENST00000615230 PSMG3Q9BT73 122 aaPredicted RBP8.13□□□□□ -1.11
TNFRSF9-204ENST00000615230 WNT10AQ9GZT5 417 aa8.13□□□□□ -1.11
TNFRSF9-204ENST00000615230 ASIPP42127 132 aa8.13□□□□□ -1.11
TNFRSF9-204ENST00000615230 WFDC6Q9BQY6 131 aa8.13□□□□□ -1.11
TNFRSF9-204ENST00000615230 TCAPO15273 167 aa8.13□□□□□ -1.11
TNFRSF9-204ENST00000615230 CD55P08174 381 aa8.13□□□□□ -1.11
TNFRSF9-204ENST00000615230 FGF8P55075 233 aaPredicted RBP8.13□□□□□ -1.11
TNFRSF9-204ENST00000615230 SLX1AQ9BQ83 275 aa8.13□□□□□ -1.11
TNFRSF9-204ENST00000615230 A0A087WV48 116 aa8.13□□□□□ -1.11
TNFRSF9-204ENST00000615230 TRAV14DV4A0A0A6YYC5 116 aa8.13□□□□□ -1.11
TNFRSF9-204ENST00000615230 OVOL1O14753 267 aa8.13□□□□□ -1.11
TNFRSF9-204ENST00000615230 PAGE4O60829 102 aa8.13□□□□□ -1.11
TNFRSF9-204ENST00000615230 CA2P00918 260 aa8.13□□□□□ -1.11
TNFRSF9-204ENST00000615230 UBE2E1P51965 193 aa8.13□□□□□ -1.11
TNFRSF9-204ENST00000615230 FAM103A1Q9BTL3 118 aaKnown RBP8.13□□□□□ -1.11
TNFRSF9-204ENST00000615230 RPUSD1Q9UJJ7 312 aaKnown RBP8.13□□□□□ -1.11
TNFRSF9-204ENST00000615230 A0A1B0GTI1 187 aa8.12□□□□□ -1.11
TNFRSF9-204ENST00000615230 PMCHP20382 165 aa8.12□□□□□ -1.11
TNFRSF9-204ENST00000615230 ZNF680Q8NEM1 530 aa8.12□□□□□ -1.11
TNFRSF9-204ENST00000615230 C2CD4CQ8TF44 421 aa8.12□□□□□ -1.11
TNFRSF9-204ENST00000615230 PACRGQ96M98 296 aaPredicted RBP8.12□□□□□ -1.11
TNFRSF9-204ENST00000615230 HLA-DQB1P01920 261 aa8.12□□□□□ -1.11
TNFRSF9-204ENST00000615230 PLAURQ03405 335 aa8.12□□□□□ -1.11
TNFRSF9-204ENST00000615230 TMEM252Q8N6L7 170 aa8.12□□□□□ -1.11
TNFRSF9-204ENST00000615230 NPDC1Q9NQX5 325 aaPredicted RBP8.12□□□□□ -1.11
TNFRSF9-204ENST00000615230 E7EQL1 145 aa8.12□□□□□ -1.11
TNFRSF9-204ENST00000615230 AANATQ16613 207 aa8.12□□□□□ -1.11
TNFRSF9-204ENST00000615230 OR10C1Q96KK4 312 aa8.12□□□□□ -1.11
TNFRSF9-204ENST00000615230 MRPS16Q9Y3D3 137 aaKnown RBP8.12□□□□□ -1.11
TNFRSF9-204ENST00000615230 A0A1B0GW15 77 aa8.12□□□□□ -1.11
TNFRSF9-204ENST00000615230 PGPA6NDG6 321 aa8.12□□□□□ -1.11
TNFRSF9-204ENST00000615230 RNF223E7ERA6 249 aa8.12□□□□□ -1.11
TNFRSF9-204ENST00000615230 CD99P14209 185 aa8.12□□□□□ -1.11
TNFRSF9-204ENST00000615230 GATA4P43694 442 aa8.12□□□□□ -1.11
TNFRSF9-204ENST00000615230 ERVK11-1P61568 191 aa8.12□□□□□ -1.11
TNFRSF9-204ENST00000615230 SRSF6Q13247 344 aaKnown RBP8.12□□□□□ -1.11
TNFRSF9-204ENST00000615230 BTN1A1Q13410 526 aa8.12□□□□□ -1.11
TNFRSF9-204ENST00000615230 UNC119Q13432 240 aa8.12□□□□□ -1.11
TNFRSF9-204ENST00000615230 ADIPOQQ15848 244 aa8.12□□□□□ -1.11
TNFRSF9-204ENST00000615230 DEFB113Q30KQ7 82 aa8.12□□□□□ -1.11
TNFRSF9-204ENST00000615230 LDLRAD3Q86YD5 345 aa8.12□□□□□ -1.11
TNFRSF9-204ENST00000615230 UBE2DNLQ8IWF7 75 aa8.12□□□□□ -1.11
TNFRSF9-204ENST00000615230 STPG2Q8N412 459 aa8.12□□□□□ -1.11
TNFRSF9-204ENST00000615230 OR2D3Q8NGH3 330 aa8.12□□□□□ -1.11
TNFRSF9-204ENST00000615230 FMC1Q96HJ9 113 aa8.12□□□□□ -1.11
TNFRSF9-204ENST00000615230 PRORYQ9H606 182 aa8.12□□□□□ -1.11
TNFRSF9-204ENST00000615230 C15orf61A6NNL5 157 aa8.12□□□□□ -1.11
TNFRSF9-204ENST00000615230 SAP30O75446 220 aa8.12□□□□□ -1.11
TNFRSF9-204ENST00000615230 AMBPP02760 352 aa8.12□□□□□ -1.11
TNFRSF9-204ENST00000615230 GPR183P32249 361 aa8.12□□□□□ -1.11
TNFRSF9-204ENST00000615230 OR52E5Q8NH55 327 aa8.12□□□□□ -1.11
TNFRSF9-204ENST00000615230 LINC01587Q99440 93 aa8.12□□□□□ -1.11
TNFRSF9-204ENST00000615230 ITGB1BP1O14713 200 aa8.11□□□□□ -1.11
TNFRSF9-204ENST00000615230 MT-ND6P03923 174 aa8.11□□□□□ -1.11
TNFRSF9-204ENST00000615230 HIST3H3Q16695 136 aa8.11□□□□□ -1.11
TNFRSF9-204ENST00000615230 OR5AL1P0C617 328 aa8.11□□□□□ -1.11
TNFRSF9-204ENST00000615230 FAM201AQ5SY85 155 aa8.11□□□□□ -1.11
TNFRSF9-204ENST00000615230 TMEM200BQ69YZ2 307 aa8.11□□□□□ -1.11
TNFRSF9-204ENST00000615230 BEND2Q8NDZ0 799 aa8.11□□□□□ -1.11
TNFRSF9-204ENST00000615230 GAFA1Q96PS6 74 aa8.11□□□□□ -1.11
TNFRSF9-204ENST00000615230 MAP1LC3CQ9BXW4 147 aa8.11□□□□□ -1.11
TNFRSF9-204ENST00000615230 DPRXA6NFQ7 191 aa8.11□□□□□ -1.11
TNFRSF9-204ENST00000615230 HLA-DRB1P01911 266 aa8.11□□□□□ -1.11
TNFRSF9-204ENST00000615230 SAA1P0DJI8 122 aaPredicted RBP8.11□□□□□ -1.11
TNFRSF9-204ENST00000615230 SPNP16150 400 aa8.11□□□□□ -1.11
TNFRSF9-204ENST00000615230 PRTN3P24158 256 aa8.11□□□□□ -1.11
TNFRSF9-204ENST00000615230 PAX8Q06710 450 aa8.11□□□□□ -1.11
TNFRSF9-204ENST00000615230 TUSC1Q2TAM9 212 aa8.11□□□□□ -1.11
TNFRSF9-204ENST00000615230 OR10S1Q8NGN2 331 aa8.11□□□□□ -1.11
TNFRSF9-204ENST00000615230 NPIPB3Q92617 1050 aa8.11□□□□□ -1.11
TNFRSF9-204ENST00000615230 IGHV2-70DA0A0C4DH43 119 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms