RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 KRTCAP3Q53RY4 240 aa13.7□□□□□ -0.22
CNOT3-208ENST00000613073 CENPVQ7Z7K6 275 aaPredicted RBP13.7□□□□□ -0.22
CNOT3-208ENST00000613073 SPACA3Q8IXA5 215 aa13.7□□□□□ -0.22
CNOT3-208ENST00000613073 MRGPRDQ8TDS7 321 aa13.7□□□□□ -0.22
CNOT3-208ENST00000613073 DERL1Q9BUN8 251 aa13.7□□□□□ -0.22
CNOT3-208ENST00000613073 SAMD10Q9BYL1 202 aa13.7□□□□□ -0.22
CNOT3-208ENST00000613073 TP53TG3Q9ULZ0 132 aa13.7□□□□□ -0.22
CNOT3-208ENST00000613073 PXMP4Q9Y6I8 212 aa13.7□□□□□ -0.22
CNOT3-208ENST00000613073 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.69□□□□□ -0.22
CNOT3-208ENST00000613073 OR5G3P0C626 314 aa13.69□□□□□ -0.22
CNOT3-208ENST00000613073 CBLN1P23435 193 aa13.69□□□□□ -0.22
CNOT3-208ENST00000613073 UBE2G2P60604 165 aa13.69□□□□□ -0.22
CNOT3-208ENST00000613073 ACSM6Q6P461 480 aa13.69□□□□□ -0.22
CNOT3-208ENST00000613073 OR5D13Q8NGL4 314 aa13.69□□□□□ -0.22
CNOT3-208ENST00000613073 SGMS2Q8NHU3 365 aa13.69□□□□□ -0.22
CNOT3-208ENST00000613073 COQ2Q96H96 371 aa13.69□□□□□ -0.22
CNOT3-208ENST00000613073 BTF3L4Q96K17 158 aa13.69□□□□□ -0.22
CNOT3-208ENST00000613073 KCNIP1Q9NZI2 227 aa13.69□□□□□ -0.22
CNOT3-208ENST00000613073 C12orf77C9JDV5 145 aa13.69□□□□□ -0.22
CNOT3-208ENST00000613073 ZZEF1O43149 2961 aa13.69□□□□□ -0.22
CNOT3-208ENST00000613073 LRRC75BQ2VPJ9 315 aa13.69□□□□□ -0.22
CNOT3-208ENST00000613073 LEMD1Q68G75 181 aa13.69□□□□□ -0.22
CNOT3-208ENST00000613073 OR52L2PQ8NGH6 319 aa13.69□□□□□ -0.22
CNOT3-208ENST00000613073 ABHD14BQ96IU4 210 aa13.69□□□□□ -0.22
CNOT3-208ENST00000613073 WDR61Q9GZS3 305 aaKnown RBP13.69□□□□□ -0.22
CNOT3-208ENST00000613073 IGF2RP11717 2491 aa13.69□□□□□ -0.22
CNOT3-208ENST00000613073 PTPRQQ9UMZ3 2332 aa13.68□□□□□ -0.22
CNOT3-208ENST00000613073 PRSS47A8MTI9 375 aa13.68□□□□□ -0.22
CNOT3-208ENST00000613073 SPRY3O43610 288 aa13.68□□□□□ -0.22
CNOT3-208ENST00000613073 NPPCP23582 126 aa13.68□□□□□ -0.22
CNOT3-208ENST00000613073 S100A7P31151 101 aa13.68□□□□□ -0.22
CNOT3-208ENST00000613073 LINC00310P59036 64 aa13.68□□□□□ -0.22
CNOT3-208ENST00000613073 TPPP2P59282 170 aa13.68□□□□□ -0.22
CNOT3-208ENST00000613073 NPIPB11E5RHQ5 1161 aa13.68□□□□□ -0.22
CNOT3-208ENST00000613073 EDDM3AQ14507 147 aa13.68□□□□□ -0.22
CNOT3-208ENST00000613073 SMIM21Q3B7S5 101 aa13.68□□□□□ -0.22
CNOT3-208ENST00000613073 DOLPP1Q86YN1 238 aa13.68□□□□□ -0.22
CNOT3-208ENST00000613073 CD177Q8N6Q3 437 aa13.68□□□□□ -0.22
CNOT3-208ENST00000613073 FAM169BQ8N8A8 192 aa13.68□□□□□ -0.22
CNOT3-208ENST00000613073 RFESDQ8TAC1 157 aa13.68□□□□□ -0.22
CNOT3-208ENST00000613073 GALMQ96C23 342 aa13.68□□□□□ -0.22
CNOT3-208ENST00000613073 DCTN5Q9BTE1 182 aa13.68□□□□□ -0.22
CNOT3-208ENST00000613073 SFXN3Q9BWM7 321 aa13.68□□□□□ -0.22
CNOT3-208ENST00000613073 USF3Q68DE3 2245 aa13.68□□□□□ -0.22
CNOT3-208ENST00000613073 IGHV3OR15-7A0A075B7D8 119 aa13.67□□□□□ -0.22
CNOT3-208ENST00000613073 CLEC18AA5D8T8 446 aa13.67□□□□□ -0.22
CNOT3-208ENST00000613073 SYNGR2O43760 224 aa13.67□□□□□ -0.22
CNOT3-208ENST00000613073 SSTR5P35346 364 aa13.67□□□□□ -0.22
CNOT3-208ENST00000613073 ZNF114Q8NC26 417 aa13.67□□□□□ -0.22
CNOT3-208ENST00000613073 CLEC18CQ8NCF0 446 aa13.67□□□□□ -0.22
CNOT3-208ENST00000613073 TAF15Q92804 592 aaKnown RBP eCLIP13.67□□□□□ -0.22
CNOT3-208ENST00000613073 OR2V2Q96R30 315 aa13.67□□□□□ -0.22
CNOT3-208ENST00000613073 TXN2Q99757 166 aa13.67□□□□□ -0.22
CNOT3-208ENST00000613073 PSMG3Q9BT73 122 aaPredicted RBP13.67□□□□□ -0.22
CNOT3-208ENST00000613073 A8MXE2 369 aa13.67□□□□□ -0.22
CNOT3-208ENST00000613073 TMEM250H0YL14 139 aa13.67□□□□□ -0.22
CNOT3-208ENST00000613073 HBZP02008 142 aa13.67□□□□□ -0.22
CNOT3-208ENST00000613073 SERF2P84101 59 aa13.67□□□□□ -0.22
CNOT3-208ENST00000613073 FFAR4Q5NUL3 377 aa13.67□□□□□ -0.22
CNOT3-208ENST00000613073 ERASQ7Z444 233 aa13.67□□□□□ -0.22
CNOT3-208ENST00000613073 BAGE3Q86Y29 109 aa13.67□□□□□ -0.22
CNOT3-208ENST00000613073 BAGE2Q86Y30 109 aa13.67□□□□□ -0.22
CNOT3-208ENST00000613073 DRAM1Q8N682 238 aa13.67□□□□□ -0.22
CNOT3-208ENST00000613073 Q8NA96 180 aa13.67□□□□□ -0.22
CNOT3-208ENST00000613073 RAB40CQ96S21 281 aa13.67□□□□□ -0.22
CNOT3-208ENST00000613073 SPTA1P02549 2419 aa13.67□□□□□ -0.22
CNOT3-208ENST00000613073 IGHV3-43A0A0B4J1X8 118 aa13.66□□□□□ -0.22
CNOT3-208ENST00000613073 IGHV3-43DP0DP04 118 aa13.66□□□□□ -0.22
CNOT3-208ENST00000613073 KLF3P57682 345 aaPredicted RBP13.66□□□□□ -0.22
CNOT3-208ENST00000613073 LTC4SQ16873 150 aa13.66□□□□□ -0.22
CNOT3-208ENST00000613073 UNQ5815/PRO19632Q6UWF5 114 aa13.66□□□□□ -0.22
CNOT3-208ENST00000613073 ZNF808Q8N4W9 903 aaPredicted RBP13.66□□□□□ -0.22
CNOT3-208ENST00000613073 TMEM204Q9BSN7 226 aa13.66□□□□□ -0.22
CNOT3-208ENST00000613073 KIAA1324LA8MWY0 1029 aaPredicted RBP13.66□□□□□ -0.22
CNOT3-208ENST00000613073 PRRG2O14669 202 aa13.66□□□□□ -0.22
CNOT3-208ENST00000613073 IGKV1-39P01597 117 aa13.66□□□□□ -0.22
CNOT3-208ENST00000613073 IGKV1D-39P04432 117 aa13.66□□□□□ -0.22
CNOT3-208ENST00000613073 THBS3P49746 956 aa13.66□□□□□ -0.22
CNOT3-208ENST00000613073 PRR30Q53SZ7 412 aaPredicted RBP13.66□□□□□ -0.22
CNOT3-208ENST00000613073 SLC35E4Q6ICL7 350 aa13.66□□□□□ -0.22
CNOT3-208ENST00000613073 MOGAT3Q86VF5 341 aa13.66□□□□□ -0.22
CNOT3-208ENST00000613073 OR5AU1Q8NGC0 362 aa13.66□□□□□ -0.22
CNOT3-208ENST00000613073 OR13A1Q8NGR1 328 aa13.66□□□□□ -0.22
CNOT3-208ENST00000613073 NEIL1Q96FI4 390 aaPredicted RBP13.66□□□□□ -0.22
CNOT3-208ENST00000613073 RNF24Q9Y225 148 aa13.66□□□□□ -0.22
CNOT3-208ENST00000613073 SPTBN4Q9H254 2564 aa13.66□□□□□ -0.22
CNOT3-208ENST00000613073 A0A0G2JNJ9 132 aa13.66□□□□□ -0.22
CNOT3-208ENST00000613073 DEFB108AA8MXU0 73 aa13.66□□□□□ -0.22
CNOT3-208ENST00000613073 C11orf94C9JXX5 98 aa13.66□□□□□ -0.22
CNOT3-208ENST00000613073 PRDX2P32119 198 aa13.66□□□□□ -0.22
CNOT3-208ENST00000613073 GLRXP35754 106 aa13.66□□□□□ -0.22
CNOT3-208ENST00000613073 HBG1P69891 147 aa13.66□□□□□ -0.22
CNOT3-208ENST00000613073 HBG2P69892 147 aa13.66□□□□□ -0.22
CNOT3-208ENST00000613073 LCN2P80188 198 aa13.66□□□□□ -0.22
CNOT3-208ENST00000613073 MSMO1Q15800 293 aa13.66□□□□□ -0.22
CNOT3-208ENST00000613073 Q6ZN92 141 aa13.66□□□□□ -0.22
CNOT3-208ENST00000613073 PINX1Q96BK5 328 aaKnown RBP13.66□□□□□ -0.22
CNOT3-208ENST00000613073 PLPPR2Q96GM1 343 aa13.66□□□□□ -0.22
CNOT3-208ENST00000613073 OR2D2Q9H210 308 aa13.66□□□□□ -0.22
CNOT3-208ENST00000613073 Q9UFV3 132 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms