RNA–Protein interactions for RNA: ENST00000612778.4

MUC1-225, Transcript of mucin 1, cell surface associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MUC1, Length 1,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-225ENST00000612778 PRNDQ9UKY0 176 aa11.05□□□□□ -0.64
MUC1-225ENST00000612778 FOXA2Q9Y261 457 aaPredicted RBP11.05□□□□□ -0.64
MUC1-225ENST00000612778 A0A0D9SG52 128 aa11.04□□□□□ -0.64
MUC1-225ENST00000612778 MED6O75586 246 aa11.04□□□□□ -0.64
MUC1-225ENST00000612778 OR2F2O95006 317 aa11.04□□□□□ -0.64
MUC1-225ENST00000612778 RPL12P30050 165 aaKnown RBP11.04□□□□□ -0.64
MUC1-225ENST00000612778 NUP62P37198 522 aaPredicted RBP11.04□□□□□ -0.64
MUC1-225ENST00000612778 F2RL1P55085 397 aa11.04□□□□□ -0.64
MUC1-225ENST00000612778 SPCS3P61009 180 aa11.04□□□□□ -0.64
MUC1-225ENST00000612778 OR2F1Q13607 317 aa11.04□□□□□ -0.64
MUC1-225ENST00000612778 FAM120AOSQ5T036 256 aa11.04□□□□□ -0.64
MUC1-225ENST00000612778 KCNRGQ8N5I3 272 aa11.04□□□□□ -0.64
MUC1-225ENST00000612778 TEX45Q8NA69 505 aa11.04□□□□□ -0.64
MUC1-225ENST00000612778 OR2T10Q8NGZ9 312 aa11.04□□□□□ -0.64
MUC1-225ENST00000612778 OR52E5Q8NH55 327 aa11.04□□□□□ -0.64
MUC1-225ENST00000612778 OR4A5Q8NH83 315 aa11.04□□□□□ -0.64
MUC1-225ENST00000612778 RAB40CQ96S21 281 aa11.04□□□□□ -0.64
MUC1-225ENST00000612778 OR51B2Q9Y5P1 312 aa11.04□□□□□ -0.64
MUC1-225ENST00000612778 FAM24AA6NFZ4 105 aa11.03□□□□□ -0.64
MUC1-225ENST00000612778 CEBPZOSA8MTT3 80 aa11.03□□□□□ -0.64
MUC1-225ENST00000612778 CRYGBP07316 175 aa11.03□□□□□ -0.64
MUC1-225ENST00000612778 BRS3P32247 399 aa11.03□□□□□ -0.64
MUC1-225ENST00000612778 CAV2P51636 162 aa11.03□□□□□ -0.64
MUC1-225ENST00000612778 HSPE1P61604 102 aaKnown RBP11.03□□□□□ -0.64
MUC1-225ENST00000612778 RPL8P62917 257 aaKnown RBP11.03□□□□□ -0.64
MUC1-225ENST00000612778 PJVKQ0ZLH3 352 aa11.03□□□□□ -0.64
MUC1-225ENST00000612778 EBI3Q14213 229 aa11.03□□□□□ -0.64
MUC1-225ENST00000612778 ZNF345Q14585 488 aa11.03□□□□□ -0.64
MUC1-225ENST00000612778 MRGPRG-AS1Q2M3A8 158 aa11.03□□□□□ -0.64
MUC1-225ENST00000612778 OR2C3Q8N628 320 aa11.03□□□□□ -0.64
MUC1-225ENST00000612778 DTD1Q8TEA8 209 aa11.03□□□□□ -0.64
MUC1-225ENST00000612778 ZNF430Q9H8G1 570 aaPredicted RBP11.03□□□□□ -0.64
MUC1-225ENST00000612778 NUP50Q9UKX7 468 aa11.03□□□□□ -0.64
MUC1-225ENST00000612778 TCF19Q9Y242 345 aa11.03□□□□□ -0.64
MUC1-225ENST00000612778 TEX15Q9BXT5 2789 aa11.03□□□□□ -0.64
MUC1-225ENST00000612778 ABCA1O95477 2261 aa11.03□□□□□ -0.64
MUC1-225ENST00000612778 FLNAP21333 2647 aaKnown RBP11.03□□□□□ -0.64
MUC1-225ENST00000612778 TEX50A0A1B0GTY4 177 aa11.02□□□□□ -0.64
MUC1-225ENST00000612778 RPS10-NUDT3A0A1W2PQS6 291 aa11.02□□□□□ -0.64
MUC1-225ENST00000612778 H3BP45 60 aa11.02□□□□□ -0.64
MUC1-225ENST00000612778 OPN1MWP04001 364 aa11.02□□□□□ -0.64
MUC1-225ENST00000612778 OPN1MW2P0DN77 364 aa11.02□□□□□ -0.64
MUC1-225ENST00000612778 OPN1MW3P0DN78 364 aa11.02□□□□□ -0.64
MUC1-225ENST00000612778 MMDQ15546 238 aa11.02□□□□□ -0.64
MUC1-225ENST00000612778 PDLIM3Q53GG5 364 aaPredicted RBP11.02□□□□□ -0.64
MUC1-225ENST00000612778 Q8N6K4 173 aa11.02□□□□□ -0.64
MUC1-225ENST00000612778 SMIM8Q96KF7 97 aa11.02□□□□□ -0.64
MUC1-225ENST00000612778 FBXL15Q9H469 300 aa11.02□□□□□ -0.64
MUC1-225ENST00000612778 LYRM2Q9NU23 88 aaPredicted RBP11.02□□□□□ -0.64
MUC1-225ENST00000612778 PSENENQ9NZ42 101 aa11.02□□□□□ -0.64
MUC1-225ENST00000612778 METTL1Q9UBP6 276 aaKnown RBP11.02□□□□□ -0.64
MUC1-225ENST00000612778 ZNF257Q9Y2Q1 563 aa11.02□□□□□ -0.64
MUC1-225ENST00000612778 SIGLEC9Q9Y336 463 aa11.02□□□□□ -0.64
MUC1-225ENST00000612778 FAM96BQ9Y3D0 163 aa11.02□□□□□ -0.64
MUC1-225ENST00000612778 WSB1Q9Y6I7 421 aa11.02□□□□□ -0.64
MUC1-225ENST00000612778 RRHO14718 337 aa11.02□□□□□ -0.65
MUC1-225ENST00000612778 GPR137BO60478 399 aa11.02□□□□□ -0.65
MUC1-225ENST00000612778 FAM106CPP0CH98 169 aa11.02□□□□□ -0.65
MUC1-225ENST00000612778 TAS2R30P59541 319 aa11.02□□□□□ -0.65
MUC1-225ENST00000612778 RPL23AP62750 156 aaKnown RBP11.02□□□□□ -0.65
MUC1-225ENST00000612778 PRSS8Q16651 343 aa11.02□□□□□ -0.65
MUC1-225ENST00000612778 CLEC9AQ6UXN8 241 aa11.02□□□□□ -0.65
MUC1-225ENST00000612778 SLC51BQ86UW2 128 aa11.02□□□□□ -0.65
MUC1-225ENST00000612778 THNSL2Q86YJ6 484 aa11.02□□□□□ -0.65
MUC1-225ENST00000612778 NPBQ8NG41 125 aa11.02□□□□□ -0.65
MUC1-225ENST00000612778 SCARB1Q8WTV0 552 aa11.02□□□□□ -0.65
MUC1-225ENST00000612778 MEGF9Q9H1U4 602 aa11.02□□□□□ -0.65
MUC1-225ENST00000612778 ZC4H2Q9NQZ6 224 aa11.02□□□□□ -0.65
MUC1-225ENST00000612778 FKBP11Q9NYL4 201 aa11.02□□□□□ -0.65
MUC1-225ENST00000612778 CACFD1Q9UGQ2 172 aa11.02□□□□□ -0.65
MUC1-225ENST00000612778 CSPG4Q6UVK1 2322 aa11.01□□□□□ -0.65
MUC1-225ENST00000612778 IGSF23A1L1A6 192 aa11.01□□□□□ -0.65
MUC1-225ENST00000612778 NBR2O15453 112 aa11.01□□□□□ -0.65
MUC1-225ENST00000612778 SPDEFO95238 335 aa11.01□□□□□ -0.65
MUC1-225ENST00000612778 TMEM11P17152 192 aa11.01□□□□□ -0.65
MUC1-225ENST00000612778 NHLH2Q02577 135 aa11.01□□□□□ -0.65
MUC1-225ENST00000612778 PPP1R27Q86WC6 154 aa11.01□□□□□ -0.65
MUC1-225ENST00000612778 TMEM252Q8N6L7 170 aa11.01□□□□□ -0.65
MUC1-225ENST00000612778 PCNPQ8WW12 178 aaKnown RBP11.01□□□□□ -0.65
MUC1-225ENST00000612778 BSCL2Q96G97 398 aaPredicted RBP11.01□□□□□ -0.65
MUC1-225ENST00000612778 CLCC1Q96S66 551 aa11.01□□□□□ -0.65
MUC1-225ENST00000612778 HINT2Q9BX68 163 aa11.01□□□□□ -0.65
MUC1-225ENST00000612778 COMMD5Q9GZQ3 224 aa11.01□□□□□ -0.65
MUC1-225ENST00000612778 E7EUB6 86 aa11□□□□□ -0.65
MUC1-225ENST00000612778 FCN1O00602 326 aa11□□□□□ -0.65
MUC1-225ENST00000612778 NDUFA3O95167 84 aa11□□□□□ -0.65
MUC1-225ENST00000612778 FSHBP01225 129 aa11□□□□□ -0.65
MUC1-225ENST00000612778 FGF2P09038 288 aa11□□□□□ -0.65
MUC1-225ENST00000612778 VDAC2P45880 294 aaPredicted RBP11□□□□□ -0.65
MUC1-225ENST00000612778 EWSR1Q01844 656 aaKnown RBP eCLIP11□□□□□ -0.65
MUC1-225ENST00000612778 SPANXN5Q5MJ07 72 aa11□□□□□ -0.65
MUC1-225ENST00000612778 C10orf55Q5SWW7 151 aa11□□□□□ -0.65
MUC1-225ENST00000612778 COMMD7Q86VX2 200 aa11□□□□□ -0.65
MUC1-225ENST00000612778 MMD2Q8IY49 270 aa11□□□□□ -0.65
MUC1-225ENST00000612778 OR5B3Q8NH48 314 aa11□□□□□ -0.65
MUC1-225ENST00000612778 NANPQ8TBE9 248 aa11□□□□□ -0.65
MUC1-225ENST00000612778 CIB3Q96Q77 187 aaPredicted RBP11□□□□□ -0.65
MUC1-225ENST00000612778 TNCP24821 2201 aa11□□□□□ -0.65
MUC1-225ENST00000612778 FBP1P09467 338 aa11□□□□□ -0.65
MUC1-225ENST00000612778 HOXA1P49639 335 aaPredicted RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms