RNA–Protein interactions for RNA: ENST00000612286.4

HOXA3-207, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HOXA3, Length 3,396 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-207ENST00000612286 CD46P15529 392 aa11.73□□□□□ -0.53
HOXA3-207ENST00000612286 SRIP30626 198 aa11.73□□□□□ -0.53
HOXA3-207ENST00000612286 SUMO1P63165 101 aaKnown RBP11.73□□□□□ -0.53
HOXA3-207ENST00000612286 SSBP4Q9BWG4 385 aaPredicted RBP11.73□□□□□ -0.53
HOXA3-207ENST00000612286 DNAJC4Q9NNZ3 241 aa11.73□□□□□ -0.53
HOXA3-207ENST00000612286 TP53TG3Q9ULZ0 132 aa11.73□□□□□ -0.53
HOXA3-207ENST00000612286 WNT2P09544 360 aa11.73□□□□□ -0.53
HOXA3-207ENST00000612286 IGFBP2P18065 325 aa11.73□□□□□ -0.53
HOXA3-207ENST00000612286 ARR3P36575 388 aa11.73□□□□□ -0.53
HOXA3-207ENST00000612286 SPATA45Q537H7 98 aa11.73□□□□□ -0.53
HOXA3-207ENST00000612286 Q56UQ5 140 aa11.73□□□□□ -0.53
HOXA3-207ENST00000612286 MMD2Q8IY49 270 aa11.73□□□□□ -0.53
HOXA3-207ENST00000612286 STARD4Q96DR4 205 aa11.73□□□□□ -0.53
HOXA3-207ENST00000612286 GNB4Q9HAV0 340 aa11.73□□□□□ -0.53
HOXA3-207ENST00000612286 LPAR2Q9HBW0 351 aa11.73□□□□□ -0.53
HOXA3-207ENST00000612286 MPC1Q9Y5U8 109 aa11.73□□□□□ -0.53
HOXA3-207ENST00000612286 IGHV3-21A0A0B4J1V1 117 aa11.73□□□□□ -0.53
HOXA3-207ENST00000612286 SRP14P37108 136 aaKnown RBP11.73□□□□□ -0.53
HOXA3-207ENST00000612286 RPL15P61313 204 aaKnown RBP11.73□□□□□ -0.53
HOXA3-207ENST00000612286 FOXF2Q12947 444 aa11.73□□□□□ -0.53
HOXA3-207ENST00000612286 TREML4Q6UXN2 200 aa11.73□□□□□ -0.53
HOXA3-207ENST00000612286 OR2Z1Q8NG97 314 aa11.73□□□□□ -0.53
HOXA3-207ENST00000612286 COQ2Q96H96 371 aa11.73□□□□□ -0.53
HOXA3-207ENST00000612286 FAM90A10PA6NDY2 464 aa11.72□□□□□ -0.53
HOXA3-207ENST00000612286 FAM90A18PA6NE21 464 aa11.72□□□□□ -0.53
HOXA3-207ENST00000612286 FAM90A16PA6NEW6 464 aa11.72□□□□□ -0.53
HOXA3-207ENST00000612286 FAM90A20PA6NIJ5 464 aa11.72□□□□□ -0.53
HOXA3-207ENST00000612286 FAM90A8PA6NJQ4 464 aa11.72□□□□□ -0.53
HOXA3-207ENST00000612286 FAM90A7PA6NKC0 464 aa11.72□□□□□ -0.53
HOXA3-207ENST00000612286 FAM90A22PA8MWA6 464 aa11.72□□□□□ -0.53
HOXA3-207ENST00000612286 FAM90A12PA8MX19 464 aa11.72□□□□□ -0.53
HOXA3-207ENST00000612286 FAM90A5PA8MXJ8 464 aa11.72□□□□□ -0.53
HOXA3-207ENST00000612286 FAM90A23PA8MXZ1 464 aa11.72□□□□□ -0.53
HOXA3-207ENST00000612286 DLEU1O43261 78 aa11.72□□□□□ -0.53
HOXA3-207ENST00000612286 FAM90A15PP0C7V4 464 aa11.72□□□□□ -0.53
HOXA3-207ENST00000612286 FAM90A13PP0C7W8 464 aa11.72□□□□□ -0.53
HOXA3-207ENST00000612286 FAM90A14PP0C7W9 464 aa11.72□□□□□ -0.53
HOXA3-207ENST00000612286 FAM90A24PP0C7X0 464 aa11.72□□□□□ -0.53
HOXA3-207ENST00000612286 MEOX1P50221 254 aa11.72□□□□□ -0.53
HOXA3-207ENST00000612286 MGST2Q99735 147 aa11.72□□□□□ -0.53
HOXA3-207ENST00000612286 PYGO2Q9BRQ0 406 aa11.72□□□□□ -0.53
HOXA3-207ENST00000612286 HIPK2Q9H2X6 1198 aa11.72□□□□□ -0.53
HOXA3-207ENST00000612286 POLDIP2Q9Y2S7 368 aa11.72□□□□□ -0.53
HOXA3-207ENST00000612286 TMEM183BQ1AE95 376 aa11.72□□□□□ -0.53
HOXA3-207ENST00000612286 UNQ5815/PRO19632Q6UWF5 114 aa11.72□□□□□ -0.53
HOXA3-207ENST00000612286 C6orf15Q6UXA7 325 aaPredicted RBP11.72□□□□□ -0.53
HOXA3-207ENST00000612286 SH2D2AQ9NP31 389 aa11.72□□□□□ -0.53
HOXA3-207ENST00000612286 TECRQ9NZ01 308 aaKnown RBP11.72□□□□□ -0.53
HOXA3-207ENST00000612286 ERVK-16P61578 105 aa11.71□□□□□ -0.53
HOXA3-207ENST00000612286 ZC2HC1AQ96GY0 325 aa11.71□□□□□ -0.53
HOXA3-207ENST00000612286 OPN3Q9H1Y3 402 aaPredicted RBP11.71□□□□□ -0.53
HOXA3-207ENST00000612286 CHRNB4P30926 498 aa11.71□□□□□ -0.53
HOXA3-207ENST00000612286 REG1BP48304 166 aa11.71□□□□□ -0.53
HOXA3-207ENST00000612286 RAB7AP51149 207 aa11.71□□□□□ -0.53
HOXA3-207ENST00000612286 CENPWQ5EE01 88 aa11.71□□□□□ -0.53
HOXA3-207ENST00000612286 LRRC29Q8WV35 223 aa11.71□□□□□ -0.53
HOXA3-207ENST00000612286 A0A1W2PN81 502 aa11.71□□□□□ -0.54
HOXA3-207ENST00000612286 STPG3Q8N7X2 389 aa11.71□□□□□ -0.54
HOXA3-207ENST00000612286 KLF14Q8TD94 323 aaPredicted RBP11.71□□□□□ -0.54
HOXA3-207ENST00000612286 TRIB1Q96RU8 372 aa11.71□□□□□ -0.54
HOXA3-207ENST00000612286 ASCL2Q99929 193 aa11.71□□□□□ -0.54
HOXA3-207ENST00000612286 ZFHX2Q9C0A1 2572 aaPredicted RBP11.71□□□□□ -0.54
HOXA3-207ENST00000612286 SH2D7A6NKC9 451 aaPredicted RBP11.7□□□□□ -0.54
HOXA3-207ENST00000612286 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.7□□□□□ -0.54
HOXA3-207ENST00000612286 GNG4P50150 75 aa11.7□□□□□ -0.54
HOXA3-207ENST00000612286 COA6Q5JTJ3 125 aaKnown RBP11.7□□□□□ -0.54
HOXA3-207ENST00000612286 DUX4L9Q6RFH8 374 aaPredicted RBP11.7□□□□□ -0.54
HOXA3-207ENST00000612286 TRAV5A0A0B4J249 113 aa11.7□□□□□ -0.54
HOXA3-207ENST00000612286 PMS2P5A8MQ11 134 aa11.7□□□□□ -0.54
HOXA3-207ENST00000612286 RAB4AP20338 218 aa11.7□□□□□ -0.54
HOXA3-207ENST00000612286 LINC00310P59036 64 aa11.7□□□□□ -0.54
HOXA3-207ENST00000612286 RELBQ01201 579 aa11.7□□□□□ -0.54
HOXA3-207ENST00000612286 LYG1Q8N1E2 194 aa11.7□□□□□ -0.54
HOXA3-207ENST00000612286 PMCHL2Q9BQD1 86 aa11.7□□□□□ -0.54
HOXA3-207ENST00000612286 FAM173AQ9BQD7 235 aa11.7□□□□□ -0.54
HOXA3-207ENST00000612286 ENY2Q9NPA8 101 aa11.7□□□□□ -0.54
HOXA3-207ENST00000612286 HNRNPA3P51991 378 aaKnown RBP11.7□□□□□ -0.54
HOXA3-207ENST00000612286 TRAT1Q6PIZ9 186 aa11.7□□□□□ -0.54
HOXA3-207ENST00000612286 STPG4Q8N801 248 aa11.7□□□□□ -0.54
HOXA3-207ENST00000612286 AGMATQ9BSE5 352 aa11.7□□□□□ -0.54
HOXA3-207ENST00000612286 ZNF586Q9NXT0 402 aa11.7□□□□□ -0.54
HOXA3-207ENST00000612286 RELNP78509 3460 aa11.69□□□□□ -0.54
HOXA3-207ENST00000612286 A8MXE2 369 aa11.69□□□□□ -0.54
HOXA3-207ENST00000612286 MLNRO43193 412 aa11.69□□□□□ -0.54
HOXA3-207ENST00000612286 PDE6DO43924 150 aa11.69□□□□□ -0.54
HOXA3-207ENST00000612286 IL6RP08887 468 aaPredicted RBP11.69□□□□□ -0.54
HOXA3-207ENST00000612286 GCHFRP30047 84 aa11.69□□□□□ -0.54
HOXA3-207ENST00000612286 HOXC12P31275 282 aa11.69□□□□□ -0.54
HOXA3-207ENST00000612286 BRS3P32247 399 aa11.69□□□□□ -0.54
HOXA3-207ENST00000612286 FOXA3P55318 350 aaPredicted RBP11.69□□□□□ -0.54
HOXA3-207ENST00000612286 KRTAP27-1Q3LI81 207 aa11.69□□□□□ -0.54
HOXA3-207ENST00000612286 RNFT1Q5M7Z0 435 aa11.69□□□□□ -0.54
HOXA3-207ENST00000612286 TPTE2P1Q5T6R2 138 aa11.69□□□□□ -0.54
HOXA3-207ENST00000612286 RNASEKQ6P5S7 137 aaKnown RBP11.69□□□□□ -0.54
HOXA3-207ENST00000612286 Q6ZS49 121 aa11.69□□□□□ -0.54
HOXA3-207ENST00000612286 SAXO1Q8IYX7 474 aa11.69□□□□□ -0.54
HOXA3-207ENST00000612286 GGTLC1Q9BX51 225 aa11.69□□□□□ -0.54
HOXA3-207ENST00000612286 SPRY3O43610 288 aa11.69□□□□□ -0.54
HOXA3-207ENST00000612286 SMPD2O60906 423 aa11.69□□□□□ -0.54
HOXA3-207ENST00000612286 PTTG1IPP53801 180 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms