RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 ZBTB34Q8NCN2 500 aa11.62□□□□□ -0.55
COL6A1-207ENST00000612273 GGTLC1Q9BX51 225 aa11.62□□□□□ -0.55
COL6A1-207ENST00000612273 FKBP11Q9NYL4 201 aa11.62□□□□□ -0.55
COL6A1-207ENST00000612273 IGFBP2P18065 325 aa11.62□□□□□ -0.55
COL6A1-207ENST00000612273 IER3P46695 156 aa11.62□□□□□ -0.55
COL6A1-207ENST00000612273 LHFPL4Q7Z7J7 247 aa11.62□□□□□ -0.55
COL6A1-207ENST00000612273 LURAP1Q96LR2 239 aa11.62□□□□□ -0.55
COL6A1-207ENST00000612273 PYGO2Q9BRQ0 406 aa11.62□□□□□ -0.55
COL6A1-207ENST00000612273 DCAF16Q9NXF7 216 aa11.62□□□□□ -0.55
COL6A1-207ENST00000612273 TP53TG5Q9Y2B4 290 aa11.62□□□□□ -0.55
COL6A1-207ENST00000612273 CACNA1BQ00975 2339 aa11.62□□□□□ -0.55
COL6A1-207ENST00000612273 ANKRD11Q6UB99 2663 aaPredicted RBP11.62□□□□□ -0.55
COL6A1-207ENST00000612273 TMEM210A6NLX4 147 aa11.62□□□□□ -0.55
COL6A1-207ENST00000612273 PRB4P10163 310 aaPredicted RBP11.62□□□□□ -0.55
COL6A1-207ENST00000612273 TIMP3P35625 211 aa11.62□□□□□ -0.55
COL6A1-207ENST00000612273 DOLPP1Q86YN1 238 aa11.62□□□□□ -0.55
COL6A1-207ENST00000612273 IGHV2OR16-5A0A0B4J2B6 119 aa11.61□□□□□ -0.55
COL6A1-207ENST00000612273 TOMM20LQ6UXN7 152 aa11.61□□□□□ -0.55
COL6A1-207ENST00000612273 HES4Q9HCC6 221 aa11.61□□□□□ -0.55
COL6A1-207ENST00000612273 SERTAD4Q9NUC0 356 aa11.61□□□□□ -0.55
COL6A1-207ENST00000612273 RELNP78509 3460 aa11.61□□□□□ -0.55
COL6A1-207ENST00000612273 C15orf65H3BRN8 121 aa11.61□□□□□ -0.55
COL6A1-207ENST00000612273 OR7C2O60412 319 aa11.61□□□□□ -0.55
COL6A1-207ENST00000612273 GFRA3O60609 400 aa11.61□□□□□ -0.55
COL6A1-207ENST00000612273 GGCTO75223 188 aaKnown RBP11.61□□□□□ -0.55
COL6A1-207ENST00000612273 WT1P19544 449 aaPredicted RBP11.61□□□□□ -0.55
COL6A1-207ENST00000612273 REG1BP48304 166 aa11.61□□□□□ -0.55
COL6A1-207ENST00000612273 ERVFC1-1P60608 527 aa11.61□□□□□ -0.55
COL6A1-207ENST00000612273 EIF4EBP1Q13541 118 aaPredicted RBP11.61□□□□□ -0.55
COL6A1-207ENST00000612273 CENPVQ7Z7K6 275 aaPredicted RBP11.61□□□□□ -0.55
COL6A1-207ENST00000612273 STPG3Q8N7X2 389 aa11.61□□□□□ -0.55
COL6A1-207ENST00000612273 CEP295Q9C0D2 2601 aa11.61□□□□□ -0.55
COL6A1-207ENST00000612273 IGHV1-18A0A0C4DH31 117 aa11.61□□□□□ -0.55
COL6A1-207ENST00000612273 HPRT1P00492 218 aa11.61□□□□□ -0.55
COL6A1-207ENST00000612273 SPCS3P61009 180 aa11.61□□□□□ -0.55
COL6A1-207ENST00000612273 PSG5Q15238 335 aa11.61□□□□□ -0.55
COL6A1-207ENST00000612273 ARSJQ5FYB0 599 aaPredicted RBP11.61□□□□□ -0.55
COL6A1-207ENST00000612273 MIR17HGQ75NE6 70 aa11.61□□□□□ -0.55
COL6A1-207ENST00000612273 OR10G8Q8NGN5 311 aa11.61□□□□□ -0.55
COL6A1-207ENST00000612273 TBX15Q96SF7 602 aa11.61□□□□□ -0.55
COL6A1-207ENST00000612273 ENY2Q9NPA8 101 aa11.61□□□□□ -0.55
COL6A1-207ENST00000612273 RYDENQ9NUL5 291 aaKnown RBP11.61□□□□□ -0.55
COL6A1-207ENST00000612273 PAM16Q9Y3D7 125 aa11.61□□□□□ -0.55
COL6A1-207ENST00000612273 APC2O95996 2303 aa11.6□□□□□ -0.55
COL6A1-207ENST00000612273 TET2Q6N021 2002 aaPredicted RBP11.6□□□□□ -0.55
COL6A1-207ENST00000612273 SPAARA0A1B0GVQ0 90 aa11.6□□□□□ -0.55
COL6A1-207ENST00000612273 IL6RP08887 468 aaPredicted RBP11.6□□□□□ -0.55
COL6A1-207ENST00000612273 BAGE3Q86Y29 109 aa11.6□□□□□ -0.55
COL6A1-207ENST00000612273 BAGE2Q86Y30 109 aa11.6□□□□□ -0.55
COL6A1-207ENST00000612273 CISD2Q8N5K1 135 aaKnown RBP11.6□□□□□ -0.55
COL6A1-207ENST00000612273 GCSAMQ8N6F7 178 aa11.6□□□□□ -0.55
COL6A1-207ENST00000612273 ITLN1Q8WWA0 313 aa11.6□□□□□ -0.55
COL6A1-207ENST00000612273 CSMD1Q96PZ7 3565 aa11.6□□□□□ -0.55
COL6A1-207ENST00000612273 PDE6DO43924 150 aa11.6□□□□□ -0.55
COL6A1-207ENST00000612273 CA2P00918 260 aa11.6□□□□□ -0.55
COL6A1-207ENST00000612273 MGST1P10620 155 aaKnown RBP11.6□□□□□ -0.55
COL6A1-207ENST00000612273 CRYBB3P26998 211 aa11.6□□□□□ -0.55
COL6A1-207ENST00000612273 PRO3102Q9H379 93 aa11.6□□□□□ -0.55
COL6A1-207ENST00000612273 FCN1O00602 326 aa11.59□□□□□ -0.55
COL6A1-207ENST00000612273 CA1P00915 261 aaPredicted RBP11.59□□□□□ -0.55
COL6A1-207ENST00000612273 APELAP0DMC3 54 aa11.59□□□□□ -0.55
COL6A1-207ENST00000612273 DEFB109BQ30KR1 87 aa11.59□□□□□ -0.55
COL6A1-207ENST00000612273 OR8I2Q8N0Y5 310 aa11.59□□□□□ -0.55
COL6A1-207ENST00000612273 OR5R1Q8NH85 324 aa11.59□□□□□ -0.55
COL6A1-207ENST00000612273 SGK494Q96LW2 274 aa11.59□□□□□ -0.55
COL6A1-207ENST00000612273 SAMD10Q9BYL1 202 aa11.59□□□□□ -0.55
COL6A1-207ENST00000612273 RNASE7Q9H1E1 156 aaKnown RBP11.59□□□□□ -0.55
COL6A1-207ENST00000612273 CLCF1Q9UBD9 225 aa11.59□□□□□ -0.55
COL6A1-207ENST00000612273 MMP23AO75900 390 aa11.59□□□□□ -0.55
COL6A1-207ENST00000612273 IGKV3-15P01624 115 aa11.59□□□□□ -0.55
COL6A1-207ENST00000612273 SP9P0CG40 484 aa11.59□□□□□ -0.55
COL6A1-207ENST00000612273 RELBQ01201 579 aa11.59□□□□□ -0.55
COL6A1-207ENST00000612273 PRB3Q04118 309 aaPredicted RBP11.59□□□□□ -0.55
COL6A1-207ENST00000612273 EFNB3Q15768 340 aa11.59□□□□□ -0.55
COL6A1-207ENST00000612273 GBGT1Q8N5D6 347 aa11.59□□□□□ -0.55
COL6A1-207ENST00000612273 CCL13Q99616 98 aa11.59□□□□□ -0.55
COL6A1-207ENST00000612273 MRPL37Q9BZE1 423 aaKnown RBP11.59□□□□□ -0.55
COL6A1-207ENST00000612273 SH3BGRL2Q9UJC5 107 aa11.59□□□□□ -0.55
COL6A1-207ENST00000612273 NPY1RP25929 384 aa11.59□□□□□ -0.55
COL6A1-207ENST00000612273 GCHFRP30047 84 aa11.59□□□□□ -0.55
COL6A1-207ENST00000612273 SRP14P37108 136 aaKnown RBP11.59□□□□□ -0.55
COL6A1-207ENST00000612273 CASP6P55212 293 aa11.59□□□□□ -0.55
COL6A1-207ENST00000612273 ACSF3Q4G176 576 aaPredicted RBP11.59□□□□□ -0.55
COL6A1-207ENST00000612273 VN1R17PQ8TDU5 208 aa11.59□□□□□ -0.55
COL6A1-207ENST00000612273 ACY3Q96HD9 319 aa11.59□□□□□ -0.55
COL6A1-207ENST00000612273 PARD6GQ9BYG4 376 aaPredicted RBP11.59□□□□□ -0.55
COL6A1-207ENST00000612273 ELOVL5Q9NYP7 299 aa11.59□□□□□ -0.55
COL6A1-207ENST00000612273 CALYQ9NYX4 217 aa11.59□□□□□ -0.55
COL6A1-207ENST00000612273 AKAP13Q12802 2813 aa11.58□□□□□ -0.56
COL6A1-207ENST00000612273 SAA2-SAA4A0A096LPE2 208 aa11.58□□□□□ -0.56
COL6A1-207ENST00000612273 K7EN84 100 aa11.58□□□□□ -0.56
COL6A1-207ENST00000612273 SAA2P0DJI9 122 aaPredicted RBP11.58□□□□□ -0.56
COL6A1-207ENST00000612273 KRTCAP3Q53RY4 240 aa11.58□□□□□ -0.56
COL6A1-207ENST00000612273 CT45A1Q5HYN5 189 aa11.58□□□□□ -0.56
COL6A1-207ENST00000612273 OR4A47Q6IF82 309 aa11.58□□□□□ -0.56
COL6A1-207ENST00000612273 CT45A3Q8NHU0 189 aa11.58□□□□□ -0.56
COL6A1-207ENST00000612273 CMTM2Q8TAZ6 248 aa11.58□□□□□ -0.56
COL6A1-207ENST00000612273 IFI27L2Q9H2X8 130 aa11.58□□□□□ -0.56
COL6A1-207ENST00000612273 SNURFLB1AK76 121 aa11.58□□□□□ -0.56
COL6A1-207ENST00000612273 IGKV1-16P04430 117 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms