RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 RPL15P61313 204 aaKnown RBP16.92■□□□□ 0.3
SSBP3-216ENST00000610401 C1orf229Q6ZS94 237 aaPredicted RBP16.92■□□□□ 0.3
SSBP3-216ENST00000610401 Q8N7P7 452 aa16.92■□□□□ 0.3
SSBP3-216ENST00000610401 OR1L6Q8NGR2 347 aa16.92■□□□□ 0.3
SSBP3-216ENST00000610401 RAB29O14966 203 aa16.91■□□□□ 0.3
SSBP3-216ENST00000610401 FOSL1P15407 271 aa16.91■□□□□ 0.3
SSBP3-216ENST00000610401 CRYBB3P26998 211 aa16.91■□□□□ 0.3
SSBP3-216ENST00000610401 WDR83OSQ9Y284 106 aa16.91■□□□□ 0.3
SSBP3-216ENST00000610401 TP53TG5Q9Y2B4 290 aa16.91■□□□□ 0.3
SSBP3-216ENST00000610401 RNF114Q9Y508 228 aa16.91■□□□□ 0.3
SSBP3-216ENST00000610401 TET2Q6N021 2002 aaPredicted RBP16.91■□□□□ 0.3
SSBP3-216ENST00000610401 TECTAO75443 2155 aa16.91■□□□□ 0.3
SSBP3-216ENST00000610401 PTPRZ1P23471 2315 aaPredicted RBP16.91■□□□□ 0.3
SSBP3-216ENST00000610401 M0R143 59 aa16.91■□□□□ 0.3
SSBP3-216ENST00000610401 WNT2P09544 360 aa16.91■□□□□ 0.3
SSBP3-216ENST00000610401 IGFBP2P18065 325 aa16.91■□□□□ 0.3
SSBP3-216ENST00000610401 ERVK-16P61578 105 aa16.91■□□□□ 0.3
SSBP3-216ENST00000610401 TAAR6Q96RI8 345 aa16.91■□□□□ 0.3
SSBP3-216ENST00000610401 GGTLC1Q9BX51 225 aa16.91■□□□□ 0.3
SSBP3-216ENST00000610401 NAV3Q8IVL0 2385 aa16.91■□□□□ 0.3
SSBP3-216ENST00000610401 OR7C2O60412 319 aa16.9■□□□□ 0.3
SSBP3-216ENST00000610401 IRF2P14316 349 aa16.9■□□□□ 0.3
SSBP3-216ENST00000610401 NTF3P20783 257 aa16.9■□□□□ 0.3
SSBP3-216ENST00000610401 MIR17HGQ75NE6 70 aa16.9■□□□□ 0.3
SSBP3-216ENST00000610401 SPRY3O43610 288 aa16.9■□□□□ 0.3
SSBP3-216ENST00000610401 PDE6DO43924 150 aa16.9■□□□□ 0.3
SSBP3-216ENST00000610401 PSG5Q15238 335 aa16.9■□□□□ 0.3
SSBP3-216ENST00000610401 ZNF766Q5HY98 468 aa16.9■□□□□ 0.3
SSBP3-216ENST00000610401 FAM19A2Q8N3H0 131 aa16.9■□□□□ 0.3
SSBP3-216ENST00000610401 BTF3L4Q96K17 158 aa16.9■□□□□ 0.3
SSBP3-216ENST00000610401 TMEM140Q9NV12 185 aa16.9■□□□□ 0.3
SSBP3-216ENST00000610401 TANC2Q9HCD6 1990 aa16.9■□□□□ 0.3
SSBP3-216ENST00000610401 PIGBOS1A0A0B4J2F0 54 aa16.89■□□□□ 0.3
SSBP3-216ENST00000610401 PRDX2P32119 198 aa16.89■□□□□ 0.3
SSBP3-216ENST00000610401 DUTP33316 252 aaKnown RBP16.89■□□□□ 0.3
SSBP3-216ENST00000610401 HTD2P86397 168 aa16.89■□□□□ 0.3
SSBP3-216ENST00000610401 RND1Q92730 232 aa16.89■□□□□ 0.3
SSBP3-216ENST00000610401 SSBP3Q9BWW4 388 aaPredicted RBP16.89■□□□□ 0.3
SSBP3-216ENST00000610401 MRPS18CQ9Y3D5 142 aaKnown RBP16.89■□□□□ 0.3
SSBP3-216ENST00000610401 CD46P15529 392 aa16.89■□□□□ 0.29
SSBP3-216ENST00000610401 PQLC2Q6ZP29 291 aa16.89■□□□□ 0.29
SSBP3-216ENST00000610401 STPG3Q8N7X2 389 aa16.89■□□□□ 0.29
SSBP3-216ENST00000610401 NAT8BQ9UHF3 227 aa16.89■□□□□ 0.29
SSBP3-216ENST00000610401 TP53TG3Q9ULZ0 132 aa16.89■□□□□ 0.29
SSBP3-216ENST00000610401 P0C879 139 aa16.89■□□□□ 0.29
SSBP3-216ENST00000610401 SNRNP40Q96DI7 357 aaKnown RBP16.89■□□□□ 0.29
SSBP3-216ENST00000610401 S1PR3Q99500 378 aa16.89■□□□□ 0.29
SSBP3-216ENST00000610401 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.88■□□□□ 0.29
SSBP3-216ENST00000610401 LYG1Q8N1E2 194 aa16.88■□□□□ 0.29
SSBP3-216ENST00000610401 LINC00479Q96M42 142 aa16.88■□□□□ 0.29
SSBP3-216ENST00000610401 IL6RP08887 468 aaPredicted RBP16.88■□□□□ 0.29
SSBP3-216ENST00000610401 COA6Q5JTJ3 125 aaKnown RBP16.88■□□□□ 0.29
SSBP3-216ENST00000610401 WNT10AQ9GZT5 417 aa16.88■□□□□ 0.29
SSBP3-216ENST00000610401 KLF13Q9Y2Y9 288 aaPredicted RBP16.88■□□□□ 0.29
SSBP3-216ENST00000610401 VENTXO95231 258 aa16.87■□□□□ 0.29
SSBP3-216ENST00000610401 CCKARP32238 428 aa16.87■□□□□ 0.29
SSBP3-216ENST00000610401 ARSJQ5FYB0 599 aaPredicted RBP16.87■□□□□ 0.29
SSBP3-216ENST00000610401 CENPVQ7Z7K6 275 aaPredicted RBP16.87■□□□□ 0.29
SSBP3-216ENST00000610401 LNP1A1A4G5 178 aa16.87■□□□□ 0.29
SSBP3-216ENST00000610401 NPSP0C0P6 89 aa16.87■□□□□ 0.29
SSBP3-216ENST00000610401 CECR9P0C854 216 aa16.87■□□□□ 0.29
SSBP3-216ENST00000610401 EFNB3Q15768 340 aa16.87■□□□□ 0.29
SSBP3-216ENST00000610401 DBX2Q6ZNG2 339 aa16.87■□□□□ 0.29
SSBP3-216ENST00000610401 C1orf210Q8IVY1 113 aa16.87■□□□□ 0.29
SSBP3-216ENST00000610401 ZCCHC14Q8WYQ9 949 aaKnown RBP16.87■□□□□ 0.29
SSBP3-216ENST00000610401 UHRF2Q96PU4 802 aa16.87■□□□□ 0.29
SSBP3-216ENST00000610401 TCF19Q9Y242 345 aa16.87■□□□□ 0.29
SSBP3-216ENST00000610401 KMT2EQ8IZD2 1858 aa16.87■□□□□ 0.29
SSBP3-216ENST00000610401 SLC35E4Q6ICL7 350 aa16.87■□□□□ 0.29
SSBP3-216ENST00000610401 KCNIP2Q9NS61 270 aa16.87■□□□□ 0.29
SSBP3-216ENST00000610401 GCHFRP30047 84 aa16.86■□□□□ 0.29
SSBP3-216ENST00000610401 OR10J1P30954 320 aa16.86■□□□□ 0.29
SSBP3-216ENST00000610401 PDLIM4P50479 330 aa16.86■□□□□ 0.29
SSBP3-216ENST00000610401 ZNF83P51522 516 aa16.86■□□□□ 0.29
SSBP3-216ENST00000610401 MOGAT3Q86VF5 341 aa16.86■□□□□ 0.29
SSBP3-216ENST00000610401 ST6GALNAC3Q8NDV1 305 aa16.86■□□□□ 0.29
SSBP3-216ENST00000610401 CDX2Q99626 313 aaPredicted RBP16.86■□□□□ 0.29
SSBP3-216ENST00000610401 OPN3Q9H1Y3 402 aaPredicted RBP16.86■□□□□ 0.29
SSBP3-216ENST00000610401 TUBG2Q9NRH3 451 aa16.86■□□□□ 0.29
SSBP3-216ENST00000610401 MED13LQ71F56 2210 aa16.86■□□□□ 0.29
SSBP3-216ENST00000610401 GFRA3O60609 400 aa16.86■□□□□ 0.29
SSBP3-216ENST00000610401 APELAP0DMC3 54 aa16.86■□□□□ 0.29
SSBP3-216ENST00000610401 SMIM21Q3B7S5 101 aa16.86■□□□□ 0.29
SSBP3-216ENST00000610401 PRR27Q6MZM9 219 aa16.86■□□□□ 0.29
SSBP3-216ENST00000610401 NEU1Q99519 415 aa16.86■□□□□ 0.29
SSBP3-216ENST00000610401 TMEM106BQ9NUM4 274 aa16.86■□□□□ 0.29
SSBP3-216ENST00000610401 ACACAQ13085 2346 aa16.86■□□□□ 0.29
SSBP3-216ENST00000610401 SPTA1P02549 2419 aa16.86■□□□□ 0.29
SSBP3-216ENST00000610401 PLAUP00749 431 aa16.85■□□□□ 0.29
SSBP3-216ENST00000610401 CA2P00918 260 aa16.85■□□□□ 0.29
SSBP3-216ENST00000610401 SUMO1P63165 101 aaKnown RBP16.85■□□□□ 0.29
SSBP3-216ENST00000610401 Q6ZVH6 145 aa16.85■□□□□ 0.29
SSBP3-216ENST00000610401 TNFSF10P50591 281 aa16.85■□□□□ 0.29
SSBP3-216ENST00000610401 LINC00310P59036 64 aa16.85■□□□□ 0.29
SSBP3-216ENST00000610401 MMD2Q8IY49 270 aa16.85■□□□□ 0.29
SSBP3-216ENST00000610401 RPH3ALQ9UNE2 315 aa16.85■□□□□ 0.29
SSBP3-216ENST00000610401 IQCF6A8MYZ5 107 aa16.85■□□□□ 0.29
SSBP3-216ENST00000610401 CXorf1O96002 111 aa16.85■□□□□ 0.29
SSBP3-216ENST00000610401 GABRA6Q16445 453 aa16.85■□□□□ 0.29
SSBP3-216ENST00000610401 MORN2Q502X0 79 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 166.1 ms