RNA–Protein interactions for RNA: ENST00000609684.2

PCDHB16-201, Transcript of protocadherin beta 16, humanhuman

APPRIS P1 BASIC

Gene PCDHB16, Length 5,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16-201ENST00000609684 C16orf92Q96LL3 132 aa12.01□□□□□ -0.49
PCDHB16-201ENST00000609684 C19orf24Q9BVV8 132 aa12.01□□□□□ -0.49
PCDHB16-201ENST00000609684 CACNA1GO43497 2377 aa12.01□□□□□ -0.49
PCDHB16-201ENST00000609684 RPL7P18124 248 aaKnown RBP12.01□□□□□ -0.49
PCDHB16-201ENST00000609684 ID1P41134 155 aa12.01□□□□□ -0.49
PCDHB16-201ENST00000609684 FOXG1P55316 489 aaPredicted RBP12.01□□□□□ -0.49
PCDHB16-201ENST00000609684 GPR61Q9BZJ8 451 aa12.01□□□□□ -0.49
PCDHB16-201ENST00000609684 POLEQ07864 2286 aa12.01□□□□□ -0.49
PCDHB16-201ENST00000609684 PLXNA3P51805 1871 aa12.01□□□□□ -0.49
PCDHB16-201ENST00000609684 CBY3A6NI87 242 aa12.01□□□□□ -0.49
PCDHB16-201ENST00000609684 SS18L1O75177 396 aaPredicted RBP12.01□□□□□ -0.49
PCDHB16-201ENST00000609684 OSR1Q8TAX0 266 aaPredicted RBP12.01□□□□□ -0.49
PCDHB16-201ENST00000609684 ZCCHC14Q8WYQ9 949 aaKnown RBP12.01□□□□□ -0.49
PCDHB16-201ENST00000609684 FAM131CQ96AQ9 280 aa12.01□□□□□ -0.49
PCDHB16-201ENST00000609684 SLC25A33Q9BSK2 321 aa12.01□□□□□ -0.49
PCDHB16-201ENST00000609684 TFPI2P48307 235 aa12□□□□□ -0.49
PCDHB16-201ENST00000609684 DYNLRB2Q8TF09 96 aa12□□□□□ -0.49
PCDHB16-201ENST00000609684 CARHSP1Q9Y2V2 147 aaKnown RBP12□□□□□ -0.49
PCDHB16-201ENST00000609684 INTS1Q8N201 2190 aaKnown RBP12□□□□□ -0.49
PCDHB16-201ENST00000609684 CGB1A6NKQ9 187 aa12□□□□□ -0.49
PCDHB16-201ENST00000609684 ATP5IP56385 69 aaPredicted RBP12□□□□□ -0.49
PCDHB16-201ENST00000609684 BIVMQ86UB2 503 aa12□□□□□ -0.49
PCDHB16-201ENST00000609684 SPRR3Q9UBC9 169 aa12□□□□□ -0.49
PCDHB16-201ENST00000609684 H0YIZ8 118 aa12□□□□□ -0.49
PCDHB16-201ENST00000609684 CD59P13987 128 aa12□□□□□ -0.49
PCDHB16-201ENST00000609684 GGNQ86UU5 652 aa12□□□□□ -0.49
PCDHB16-201ENST00000609684 MRPL32Q9BYC8 188 aaKnown RBP12□□□□□ -0.49
PCDHB16-201ENST00000609684 TM4SF5O14894 197 aa12□□□□□ -0.49
PCDHB16-201ENST00000609684 RNF224P0DH78 156 aa12□□□□□ -0.49
PCDHB16-201ENST00000609684 KIR2DL2P43627 348 aaPredicted RBP12□□□□□ -0.49
PCDHB16-201ENST00000609684 NABP1Q96AH0 204 aa12□□□□□ -0.49
PCDHB16-201ENST00000609684 TRAV30A0A087WSZ9 112 aa11.99□□□□□ -0.49
PCDHB16-201ENST00000609684 TRAV24A0A0B4J272 114 aa11.99□□□□□ -0.49
PCDHB16-201ENST00000609684 PGLYRP4Q96LB8 373 aa11.99□□□□□ -0.49
PCDHB16-201ENST00000609684 THADAQ6YHU6 1953 aa11.99□□□□□ -0.49
PCDHB16-201ENST00000609684 IGHV3-35A0A0C4DH35 117 aa11.99□□□□□ -0.49
PCDHB16-201ENST00000609684 IGKV1-12A0A0C4DH73 117 aa11.99□□□□□ -0.49
PCDHB16-201ENST00000609684 NPIPB11E5RHQ5 1161 aa11.99□□□□□ -0.49
PCDHB16-201ENST00000609684 IGKV1D-12P01611 117 aa11.99□□□□□ -0.49
PCDHB16-201ENST00000609684 FNDC1Q4ZHG4 1894 aaPredicted RBP11.99□□□□□ -0.49
PCDHB16-201ENST00000609684 SCGB1D4Q6XE38 83 aa11.99□□□□□ -0.49
PCDHB16-201ENST00000609684 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.99□□□□□ -0.49
PCDHB16-201ENST00000609684 C18orf12Q96KH6 178 aa11.99□□□□□ -0.49
PCDHB16-201ENST00000609684 WDR81Q562E7 1941 aa11.99□□□□□ -0.49
PCDHB16-201ENST00000609684 TFF1P04155 84 aa11.99□□□□□ -0.49
PCDHB16-201ENST00000609684 TRGC1P0CF51 173 aa11.99□□□□□ -0.49
PCDHB16-201ENST00000609684 NAT1P18440 290 aa11.99□□□□□ -0.49
PCDHB16-201ENST00000609684 KIAA1644Q3SXP7 199 aa11.99□□□□□ -0.49
PCDHB16-201ENST00000609684 ZNF738Q8NE65 137 aa11.99□□□□□ -0.49
PCDHB16-201ENST00000609684 SFRP2Q96HF1 295 aa11.99□□□□□ -0.49
PCDHB16-201ENST00000609684 COL4A6Q14031 1691 aa11.98□□□□□ -0.49
PCDHB16-201ENST00000609684 COX6B1P14854 86 aa11.98□□□□□ -0.49
PCDHB16-201ENST00000609684 ATP5J2P56134 94 aa11.98□□□□□ -0.49
PCDHB16-201ENST00000609684 MYOZ3Q8TDC0 251 aa11.98□□□□□ -0.49
PCDHB16-201ENST00000609684 IFI27L2Q9H2X8 130 aa11.98□□□□□ -0.49
PCDHB16-201ENST00000609684 IGFBP2P18065 325 aa11.98□□□□□ -0.49
PCDHB16-201ENST00000609684 RELBQ01201 579 aa11.98□□□□□ -0.49
PCDHB16-201ENST00000609684 CENPWQ5EE01 88 aa11.98□□□□□ -0.49
PCDHB16-201ENST00000609684 WDR82Q6UXN9 313 aa11.98□□□□□ -0.49
PCDHB16-201ENST00000609684 FAM90A1Q86YD7 464 aa11.98□□□□□ -0.49
PCDHB16-201ENST00000609684 ZNF525Q8N782 197 aa11.98□□□□□ -0.49
PCDHB16-201ENST00000609684 C17orf100A8MU93 164 aa11.98□□□□□ -0.49
PCDHB16-201ENST00000609684 MPZP25189 248 aa11.98□□□□□ -0.49
PCDHB16-201ENST00000609684 LY6EQ16553 131 aa11.98□□□□□ -0.49
PCDHB16-201ENST00000609684 CYP2G1PQ6ZSU1 146 aa11.98□□□□□ -0.49
PCDHB16-201ENST00000609684 OR10J6PQ8NGY7 276 aa11.98□□□□□ -0.49
PCDHB16-201ENST00000609684 PIMREGQ9BSJ6 248 aa11.98□□□□□ -0.49
PCDHB16-201ENST00000609684 FBXL15Q9H469 300 aa11.98□□□□□ -0.49
PCDHB16-201ENST00000609684 IGKV3D-15A0A087WSY6 115 aa11.98□□□□□ -0.49
PCDHB16-201ENST00000609684 IFITM10A6NMD0 228 aa11.98□□□□□ -0.49
PCDHB16-201ENST00000609684 IL4P05112 153 aa11.98□□□□□ -0.49
PCDHB16-201ENST00000609684 SRP19P09132 144 aaKnown RBP11.98□□□□□ -0.49
PCDHB16-201ENST00000609684 CD99P14209 185 aa11.98□□□□□ -0.49
PCDHB16-201ENST00000609684 LINC00305Q7Z4B0 112 aa11.98□□□□□ -0.49
PCDHB16-201ENST00000609684 ATRAIDQ6UW56 229 aa11.97□□□□□ -0.49
PCDHB16-201ENST00000609684 SRSF12Q8WXF0 261 aaKnown RBP11.97□□□□□ -0.49
PCDHB16-201ENST00000609684 GGACTQ9BVM4 153 aa11.97□□□□□ -0.49
PCDHB16-201ENST00000609684 SSBP3Q9BWW4 388 aaPredicted RBP11.97□□□□□ -0.49
PCDHB16-201ENST00000609684 MRPL20Q9BYC9 149 aaKnown RBP11.97□□□□□ -0.49
PCDHB16-201ENST00000609684 CHODLQ9H9P2 273 aa11.97□□□□□ -0.49
PCDHB16-201ENST00000609684 TP53BP1Q12888 1972 aaPredicted RBP11.97□□□□□ -0.49
PCDHB16-201ENST00000609684 A0A1W2PS18 150 aa11.97□□□□□ -0.49
PCDHB16-201ENST00000609684 M0QZK8 103 aa11.97□□□□□ -0.49
PCDHB16-201ENST00000609684 GGCTO75223 188 aaKnown RBP11.97□□□□□ -0.49
PCDHB16-201ENST00000609684 AMY1AP04745 511 aa11.97□□□□□ -0.49
PCDHB16-201ENST00000609684 SRIP30626 198 aa11.97□□□□□ -0.49
PCDHB16-201ENST00000609684 TM4SF20Q53R12 229 aa11.97□□□□□ -0.49
PCDHB16-201ENST00000609684 SCN8AQ9UQD0 1980 aa11.97□□□□□ -0.49
PCDHB16-201ENST00000609684 IGHV3OR16-10A0A075B7F0 116 aa11.97□□□□□ -0.49
PCDHB16-201ENST00000609684 TCTAP57738 103 aa11.97□□□□□ -0.49
PCDHB16-201ENST00000609684 ZNF497Q6ZNH5 498 aa11.97□□□□□ -0.49
PCDHB16-201ENST00000609684 GOLT1AQ6ZVE7 132 aa11.97□□□□□ -0.49
PCDHB16-201ENST00000609684 NBASA2RRP1 2371 aa11.97□□□□□ -0.49
PCDHB16-201ENST00000609684 CDK2AP1O14519 115 aa11.97□□□□□ -0.49
PCDHB16-201ENST00000609684 CKS2P33552 79 aa11.97□□□□□ -0.49
PCDHB16-201ENST00000609684 CDX1P47902 265 aaPredicted RBP11.97□□□□□ -0.49
PCDHB16-201ENST00000609684 HERVK_113P61574 105 aa11.97□□□□□ -0.49
PCDHB16-201ENST00000609684 ZNF841Q6ZN19 808 aa11.97□□□□□ -0.49
PCDHB16-201ENST00000609684 GTF3AQ92664 365 aaKnown RBP11.97□□□□□ -0.49
PCDHB16-201ENST00000609684 CGAP01215 116 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms