RNA–Protein interactions for RNA: ENST00000609024.5

CHMP4A-211, Transcript of charged multivesicular body protein 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4A, Length 735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-211ENST00000609024 PRR20EP86478 221 aa12.8□□□□□ -0.36
CHMP4A-211ENST00000609024 PRR20CP86479 221 aa12.8□□□□□ -0.36
CHMP4A-211ENST00000609024 PRR20DP86480 221 aa12.8□□□□□ -0.36
CHMP4A-211ENST00000609024 PRR20BP86481 221 aa12.8□□□□□ -0.36
CHMP4A-211ENST00000609024 PRR20AP86496 221 aa12.8□□□□□ -0.36
CHMP4A-211ENST00000609024 HES5Q5TA89 166 aa12.8□□□□□ -0.36
CHMP4A-211ENST00000609024 OR11H2Q8NH07 326 aa12.8□□□□□ -0.36
CHMP4A-211ENST00000609024 CD300LFQ8TDQ1 290 aa12.8□□□□□ -0.36
CHMP4A-211ENST00000609024 GFI1Q99684 422 aa12.8□□□□□ -0.36
CHMP4A-211ENST00000609024 OR2W1Q9Y3N9 320 aa12.8□□□□□ -0.36
CHMP4A-211ENST00000609024 PTGES3LE9PB15 166 aa12.79□□□□□ -0.36
CHMP4A-211ENST00000609024 TGOLN2O43493 480 aa12.79□□□□□ -0.36
CHMP4A-211ENST00000609024 HSMCR30P0CW71 290 aa12.79□□□□□ -0.36
CHMP4A-211ENST00000609024 HIST1H1DP16402 221 aaKnown RBP12.79□□□□□ -0.36
CHMP4A-211ENST00000609024 RPL30P62888 115 aaKnown RBP12.79□□□□□ -0.36
CHMP4A-211ENST00000609024 ARL6IP1Q15041 203 aa12.79□□□□□ -0.36
CHMP4A-211ENST00000609024 PUSL1Q8N0Z8 303 aaKnown RBP12.79□□□□□ -0.36
CHMP4A-211ENST00000609024 PACRGLQ8N7B6 248 aa12.79□□□□□ -0.36
CHMP4A-211ENST00000609024 OR4A5Q8NH83 315 aa12.79□□□□□ -0.36
CHMP4A-211ENST00000609024 ZNF502Q8TBZ5 544 aa12.79□□□□□ -0.36
CHMP4A-211ENST00000609024 TMEM190Q8WZ59 177 aa12.79□□□□□ -0.36
CHMP4A-211ENST00000609024 ZNF436Q9C0F3 470 aaPredicted RBP12.79□□□□□ -0.36
CHMP4A-211ENST00000609024 C11orf68Q9H3H3 251 aaKnown RBP12.79□□□□□ -0.36
CHMP4A-211ENST00000609024 KIAA1109Q2LD37 5005 aa12.78□□□□□ -0.36
CHMP4A-211ENST00000609024 MFNGO00587 321 aa12.78□□□□□ -0.36
CHMP4A-211ENST00000609024 NFYAP23511 347 aaPredicted RBP12.78□□□□□ -0.36
CHMP4A-211ENST00000609024 PSMA1P25786 263 aaKnown RBP12.78□□□□□ -0.36
CHMP4A-211ENST00000609024 PTBP1P26599 531 aaKnown RBP eCLIP12.78□□□□□ -0.36
CHMP4A-211ENST00000609024 APRG1Q8IVJ8 170 aa12.78□□□□□ -0.36
CHMP4A-211ENST00000609024 COMMD5Q9GZQ3 224 aa12.78□□□□□ -0.36
CHMP4A-211ENST00000609024 TAS2R8Q9NYW2 309 aa12.78□□□□□ -0.36
CHMP4A-211ENST00000609024 RYR1P21817 5038 aa12.78□□□□□ -0.36
CHMP4A-211ENST00000609024 OR2T8A6NH00 312 aa12.77□□□□□ -0.37
CHMP4A-211ENST00000609024 C11orf94C9JXX5 98 aa12.77□□□□□ -0.37
CHMP4A-211ENST00000609024 CTSDP07339 412 aaPredicted RBP12.77□□□□□ -0.37
CHMP4A-211ENST00000609024 MED14OSP0DP75 135 aa12.77□□□□□ -0.37
CHMP4A-211ENST00000609024 KLK9Q2XQG4 91 aa12.77□□□□□ -0.37
CHMP4A-211ENST00000609024 Q6ZS49 121 aa12.77□□□□□ -0.37
CHMP4A-211ENST00000609024 MFSD4AQ8N468 514 aa12.77□□□□□ -0.37
CHMP4A-211ENST00000609024 CMTM3Q96MX0 182 aa12.77□□□□□ -0.37
CHMP4A-211ENST00000609024 FKBP14Q9NWM8 211 aa12.77□□□□□ -0.37
CHMP4A-211ENST00000609024 SCN3BQ9NY72 215 aa12.77□□□□□ -0.37
CHMP4A-211ENST00000609024 KLK9Q9UKQ9 250 aa12.77□□□□□ -0.37
CHMP4A-211ENST00000609024 A0A1B0GW64 132 aa12.76□□□□□ -0.37
CHMP4A-211ENST00000609024 PDCD5O14737 125 aa12.76□□□□□ -0.37
CHMP4A-211ENST00000609024 MRPS14O60783 128 aaKnown RBP12.76□□□□□ -0.37
CHMP4A-211ENST00000609024 HLA-DQB1P01920 261 aa12.76□□□□□ -0.37
CHMP4A-211ENST00000609024 GNAO1P09471 354 aa12.76□□□□□ -0.37
CHMP4A-211ENST00000609024 DTYMKP23919 212 aa12.76□□□□□ -0.37
CHMP4A-211ENST00000609024 ADMP35318 185 aa12.76□□□□□ -0.37
CHMP4A-211ENST00000609024 TFPI2P48307 235 aa12.76□□□□□ -0.37
CHMP4A-211ENST00000609024 MFAP2P55001 183 aa12.76□□□□□ -0.37
CHMP4A-211ENST00000609024 PLA2G7Q13093 441 aa12.76□□□□□ -0.37
CHMP4A-211ENST00000609024 LAIR2Q6ISS4 152 aa12.76□□□□□ -0.37
CHMP4A-211ENST00000609024 SPSB3Q6PJ21 355 aa12.76□□□□□ -0.37
CHMP4A-211ENST00000609024 ZNF66Q6ZN08 573 aa12.76□□□□□ -0.37
CHMP4A-211ENST00000609024 TMEM91Q6ZNR0 172 aa12.76□□□□□ -0.37
CHMP4A-211ENST00000609024 NR2C2APQ86WQ0 139 aa12.76□□□□□ -0.37
CHMP4A-211ENST00000609024 VN1R17PQ8TDU5 208 aa12.76□□□□□ -0.37
CHMP4A-211ENST00000609024 BSCL2Q96G97 398 aaPredicted RBP12.76□□□□□ -0.37
CHMP4A-211ENST00000609024 BET1LQ9NYM9 111 aa12.76□□□□□ -0.37
CHMP4A-211ENST00000609024 IGKV1D-8A0A087WSZ0 117 aa12.75□□□□□ -0.37
CHMP4A-211ENST00000609024 NDUFA4O00483 81 aa12.75□□□□□ -0.37
CHMP4A-211ENST00000609024 ZNF207O43670 478 aaKnown RBP12.75□□□□□ -0.37
CHMP4A-211ENST00000609024 S1PR2O95136 353 aa12.75□□□□□ -0.37
CHMP4A-211ENST00000609024 RAB6AP20340 208 aa12.75□□□□□ -0.37
CHMP4A-211ENST00000609024 RPS25P62851 125 aaKnown RBP12.75□□□□□ -0.37
CHMP4A-211ENST00000609024 SLC25A24Q6NUK1 477 aa12.75□□□□□ -0.37
CHMP4A-211ENST00000609024 ATG5Q9H1Y0 275 aa12.75□□□□□ -0.37
CHMP4A-211ENST00000609024 DEFB4AO15263 64 aa12.74□□□□□ -0.37
CHMP4A-211ENST00000609024 CA1P00915 261 aaPredicted RBP12.74□□□□□ -0.37
CHMP4A-211ENST00000609024 OR2B8PP59922 312 aa12.74□□□□□ -0.37
CHMP4A-211ENST00000609024 TMEM187Q14656 261 aa12.74□□□□□ -0.37
CHMP4A-211ENST00000609024 TIMM50Q3ZCQ8 353 aa12.74□□□□□ -0.37
CHMP4A-211ENST00000609024 GVQW1Q8N7I0 195 aa12.74□□□□□ -0.37
CHMP4A-211ENST00000609024 UBAC2Q8NBM4 344 aa12.74□□□□□ -0.37
CHMP4A-211ENST00000609024 SRSF8Q9BRL6 282 aaKnown RBP12.74□□□□□ -0.37
CHMP4A-211ENST00000609024 CCDC90BQ9GZT6 254 aa12.74□□□□□ -0.37
CHMP4A-211ENST00000609024 APLNQ9ULZ1 77 aa12.74□□□□□ -0.37
CHMP4A-211ENST00000609024 LSM2Q9Y333 95 aaKnown RBP12.74□□□□□ -0.37
CHMP4A-211ENST00000609024 IGHV3OR16-8A0A075B7F1 116 aa12.73□□□□□ -0.37
CHMP4A-211ENST00000609024 K7EMT4 169 aa12.73□□□□□ -0.37
CHMP4A-211ENST00000609024 PAFAH1B2P68402 229 aa12.73□□□□□ -0.37
CHMP4A-211ENST00000609024 Q56UQ5 140 aa12.73□□□□□ -0.37
CHMP4A-211ENST00000609024 CNIH2Q6PI25 160 aa12.73□□□□□ -0.37
CHMP4A-211ENST00000609024 SPAG16Q8N0X2 631 aa12.73□□□□□ -0.37
CHMP4A-211ENST00000609024 ACOT13Q9NPJ3 140 aa12.73□□□□□ -0.37
CHMP4A-211ENST00000609024 IGKV3-7A0A075B6H7 116 aa12.72□□□□□ -0.37
CHMP4A-211ENST00000609024 IGKV1D-13A0A0B4J2D9 117 aa12.72□□□□□ -0.37
CHMP4A-211ENST00000609024 C15orf62A8K5M9 175 aa12.72□□□□□ -0.37
CHMP4A-211ENST00000609024 TNFSF12O43508 249 aa12.72□□□□□ -0.37
CHMP4A-211ENST00000609024 IGLV2-14P01704 120 aa12.72□□□□□ -0.37
CHMP4A-211ENST00000609024 IGKV1-13P0DP09 117 aa12.72□□□□□ -0.37
CHMP4A-211ENST00000609024 IRF3Q14653 427 aa12.72□□□□□ -0.37
CHMP4A-211ENST00000609024 ZNF124Q15973 351 aa12.72□□□□□ -0.37
CHMP4A-211ENST00000609024 CDNFQ49AH0 187 aa12.72□□□□□ -0.37
CHMP4A-211ENST00000609024 THOC7Q6I9Y2 204 aaKnown RBP12.72□□□□□ -0.37
CHMP4A-211ENST00000609024 HSD17B13Q7Z5P4 300 aaPredicted RBP12.72□□□□□ -0.37
CHMP4A-211ENST00000609024 DMBX1Q8NFW5 382 aa12.72□□□□□ -0.37
CHMP4A-211ENST00000609024 QTRT1Q9BXR0 403 aaKnown RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms