RNA–Protein interactions for RNA: ENST00000608295.5

HDDC2-204, Transcript of HD domain containing 2, humanhuman

TSL 5 BASIC

Gene HDDC2, Length 879 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-204ENST00000608295 PEF1Q9UBV8 284 aaKnown RBP11.12□□□□□ -0.63
HDDC2-204ENST00000608295 ZNF256Q9Y2P7 627 aaPredicted RBP11.12□□□□□ -0.63
HDDC2-204ENST00000608295 PPP5D1E7EU14 171 aa11.11□□□□□ -0.63
HDDC2-204ENST00000608295 UPK2O00526 184 aa11.11□□□□□ -0.63
HDDC2-204ENST00000608295 NDUFB8O95169 186 aa11.11□□□□□ -0.63
HDDC2-204ENST00000608295 HLA-AP01891 365 aaKnown RBP11.11□□□□□ -0.63
HDDC2-204ENST00000608295 ZNF735P0CB33 412 aa11.11□□□□□ -0.63
HDDC2-204ENST00000608295 SPNP16150 400 aa11.11□□□□□ -0.63
HDDC2-204ENST00000608295 ZP3P21754 424 aa11.11□□□□□ -0.63
HDDC2-204ENST00000608295 F2RP25116 425 aa11.11□□□□□ -0.63
HDDC2-204ENST00000608295 ATP5G2Q06055 141 aa11.11□□□□□ -0.63
HDDC2-204ENST00000608295 CD69Q07108 199 aa11.11□□□□□ -0.63
HDDC2-204ENST00000608295 IL18Q14116 193 aa11.11□□□□□ -0.63
HDDC2-204ENST00000608295 C15orf32Q32M92 178 aa11.11□□□□□ -0.63
HDDC2-204ENST00000608295 ACSM6Q6P461 480 aa11.11□□□□□ -0.63
HDDC2-204ENST00000608295 OR10W1Q8NGF6 305 aa11.11□□□□□ -0.63
HDDC2-204ENST00000608295 DGCR14Q96DF8 476 aaKnown RBP11.11□□□□□ -0.63
HDDC2-204ENST00000608295 DIRAS2Q96HU8 199 aa11.11□□□□□ -0.63
HDDC2-204ENST00000608295 OR4C12Q96R67 309 aa11.11□□□□□ -0.63
HDDC2-204ENST00000608295 ZC4H2Q9NQZ6 224 aa11.11□□□□□ -0.63
HDDC2-204ENST00000608295 CCDC59Q9P031 241 aaKnown RBP11.11□□□□□ -0.63
HDDC2-204ENST00000608295 FBXL7Q9UJT9 491 aa11.11□□□□□ -0.63
HDDC2-204ENST00000608295 SELENOKQ9Y6D0 94 aa11.11□□□□□ -0.63
HDDC2-204ENST00000608295 FAM223BA6NKX1 122 aa11.1□□□□□ -0.63
HDDC2-204ENST00000608295 DEFA4P12838 97 aa11.1□□□□□ -0.63
HDDC2-204ENST00000608295 MAS1LP35410 378 aa11.1□□□□□ -0.63
HDDC2-204ENST00000608295 TMBIM6P55061 237 aa11.1□□□□□ -0.63
HDDC2-204ENST00000608295 ZNF585BQ52M93 769 aa11.1□□□□□ -0.63
HDDC2-204ENST00000608295 ZNF343Q6P1L6 599 aa11.1□□□□□ -0.63
HDDC2-204ENST00000608295 SLC25A42Q86VD7 318 aa11.1□□□□□ -0.63
HDDC2-204ENST00000608295 FAM223AQ8IWN6 122 aa11.1□□□□□ -0.63
HDDC2-204ENST00000608295 TTC9CQ8N5M4 171 aa11.1□□□□□ -0.63
HDDC2-204ENST00000608295 OR4A5Q8NH83 315 aa11.1□□□□□ -0.63
HDDC2-204ENST00000608295 COMMD5Q9GZQ3 224 aa11.1□□□□□ -0.63
HDDC2-204ENST00000608295 PLEKHA2Q9HB19 425 aa11.1□□□□□ -0.63
HDDC2-204ENST00000608295 SLC2A9Q9NRM0 540 aa11.1□□□□□ -0.63
HDDC2-204ENST00000608295 MTFP1Q9UDX5 166 aa11.1□□□□□ -0.63
HDDC2-204ENST00000608295 ZNF257Q9Y2Q1 563 aa11.1□□□□□ -0.63
HDDC2-204ENST00000608295 IGHV3-21A0A0B4J1V1 117 aa11.09□□□□□ -0.63
HDDC2-204ENST00000608295 BMPR1BO00238 502 aa11.09□□□□□ -0.63
HDDC2-204ENST00000608295 RAB3DO95716 219 aa11.09□□□□□ -0.63
HDDC2-204ENST00000608295 EDN2P20800 178 aa11.09□□□□□ -0.63
HDDC2-204ENST00000608295 PSMB6P28072 239 aa11.09□□□□□ -0.63
HDDC2-204ENST00000608295 S100GP29377 79 aa11.09□□□□□ -0.63
HDDC2-204ENST00000608295 IZUMO4Q1ZYL8 232 aa11.09□□□□□ -0.63
HDDC2-204ENST00000608295 VAX1Q5SQQ9 334 aa11.09□□□□□ -0.63
HDDC2-204ENST00000608295 ZNF429Q86V71 674 aa11.09□□□□□ -0.63
HDDC2-204ENST00000608295 SLC38A6Q8IZM9 456 aa11.09□□□□□ -0.63
HDDC2-204ENST00000608295 CD300LFQ8TDQ1 290 aa11.09□□□□□ -0.63
HDDC2-204ENST00000608295 MRGPRFQ96AM1 343 aa11.09□□□□□ -0.63
HDDC2-204ENST00000608295 USMG5Q96IX5 58 aa11.09□□□□□ -0.63
HDDC2-204ENST00000608295 ASCL2Q99929 193 aa11.09□□□□□ -0.63
HDDC2-204ENST00000608295 SORL1Q92673 2214 aa11.08□□□□□ -0.64
HDDC2-204ENST00000608295 TRBV9A0A0B4J1U6 114 aa11.08□□□□□ -0.64
HDDC2-204ENST00000608295 IGLC7A0M8Q6 106 aa11.08□□□□□ -0.64
HDDC2-204ENST00000608295 MFSD2BA6NFX1 497 aa11.08□□□□□ -0.64
HDDC2-204ENST00000608295 NPIPB5A8MRT5 1133 aa11.08□□□□□ -0.64
HDDC2-204ENST00000608295 MECP2P51608 486 aaKnown RBP11.08□□□□□ -0.64
HDDC2-204ENST00000608295 TAS2R19P59542 299 aa11.08□□□□□ -0.64
HDDC2-204ENST00000608295 POU2AF1Q16633 256 aa11.08□□□□□ -0.64
HDDC2-204ENST00000608295 CLEC19AQ6UXS0 136 aa11.08□□□□□ -0.64
HDDC2-204ENST00000608295 NECAP1Q8NC96 275 aa11.08□□□□□ -0.64
HDDC2-204ENST00000608295 OR9G4Q8NGQ1 327 aa11.08□□□□□ -0.64
HDDC2-204ENST00000608295 MCFD2Q8NI22 146 aa11.08□□□□□ -0.64
HDDC2-204ENST00000608295 FANCD2OSQ96PS1 177 aa11.08□□□□□ -0.64
HDDC2-204ENST00000608295 AIFM2Q9BRQ8 373 aa11.08□□□□□ -0.64
HDDC2-204ENST00000608295 ELOVL1Q9BW60 279 aa11.08□□□□□ -0.64
HDDC2-204ENST00000608295 QTRT1Q9BXR0 403 aaKnown RBP11.08□□□□□ -0.64
HDDC2-204ENST00000608295 DBX1A6NMT0 343 aa11.07□□□□□ -0.64
HDDC2-204ENST00000608295 GABARAPH6UMI1 98 aa11.07□□□□□ -0.64
HDDC2-204ENST00000608295 SNAPC5O75971 98 aa11.07□□□□□ -0.64
HDDC2-204ENST00000608295 IGKV1-39P01597 117 aa11.07□□□□□ -0.64
HDDC2-204ENST00000608295 IGKV1D-39P04432 117 aa11.07□□□□□ -0.64
HDDC2-204ENST00000608295 CTRB1P17538 263 aa11.07□□□□□ -0.64
HDDC2-204ENST00000608295 INSL3P51460 131 aa11.07□□□□□ -0.64
HDDC2-204ENST00000608295 PIGPP57054 158 aa11.07□□□□□ -0.64
HDDC2-204ENST00000608295 SPINK9Q5DT21 86 aa11.07□□□□□ -0.64
HDDC2-204ENST00000608295 CTRB2Q6GPI1 263 aa11.07□□□□□ -0.64
HDDC2-204ENST00000608295 STEAP1BQ6NZ63 245 aa11.07□□□□□ -0.64
HDDC2-204ENST00000608295 LPCAT3Q6P1A2 487 aa11.07□□□□□ -0.64
HDDC2-204ENST00000608295 OR6Q1Q8NGQ2 317 aa11.07□□□□□ -0.64
HDDC2-204ENST00000608295 OR13C8Q8NGS7 320 aa11.07□□□□□ -0.64
HDDC2-204ENST00000608295 MARCH1Q8TCQ1 289 aa11.07□□□□□ -0.64
HDDC2-204ENST00000608295 CCDC140Q96MF4 163 aa11.07□□□□□ -0.64
HDDC2-204ENST00000608295 SLIRPQ9GZT3 109 aaKnown RBP11.07□□□□□ -0.64
HDDC2-204ENST00000608295 ZMAT5Q9UDW3 170 aaKnown RBP11.07□□□□□ -0.64
HDDC2-204ENST00000608295 OR51B2Q9Y5P1 312 aa11.07□□□□□ -0.64
HDDC2-204ENST00000608295 CEPT1Q9Y6K0 416 aa11.07□□□□□ -0.64
HDDC2-204ENST00000608295 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.06□□□□□ -0.64
HDDC2-204ENST00000608295 IGHV3-35A0A0C4DH35 117 aa11.06□□□□□ -0.64
HDDC2-204ENST00000608295 TEX50A0A1B0GTY4 177 aa11.06□□□□□ -0.64
HDDC2-204ENST00000608295 DHFRP00374 187 aa11.06□□□□□ -0.64
HDDC2-204ENST00000608295 TRAPPC2P0DI81 140 aa11.06□□□□□ -0.64
HDDC2-204ENST00000608295 TRAPPC2BP0DI82 140 aa11.06□□□□□ -0.64
HDDC2-204ENST00000608295 OR13C7P0DN81 318 aa11.06□□□□□ -0.64
HDDC2-204ENST00000608295 GP9P14770 177 aa11.06□□□□□ -0.64
HDDC2-204ENST00000608295 ARL3P36405 182 aa11.06□□□□□ -0.64
HDDC2-204ENST00000608295 KLF5Q13887 457 aaPredicted RBP11.06□□□□□ -0.64
HDDC2-204ENST00000608295 TMEM229BQ8NBD8 167 aa11.06□□□□□ -0.64
HDDC2-204ENST00000608295 OR4C16Q8NGL9 310 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 115 ms