RNA–Protein interactions for RNA: ENST00000607814.5

CTSA-218, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-218ENST00000607814 LPAR6P43657 344 aa10.42□□□□□ -0.74
CTSA-218ENST00000607814 RHOGP84095 191 aa10.42□□□□□ -0.74
CTSA-218ENST00000607814 CATR1Q13166 79 aa10.42□□□□□ -0.74
CTSA-218ENST00000607814 MSMO1Q15800 293 aa10.42□□□□□ -0.74
CTSA-218ENST00000607814 DMBX1Q8NFW5 382 aa10.42□□□□□ -0.74
CTSA-218ENST00000607814 OR4D10Q8NGI6 311 aa10.42□□□□□ -0.74
CTSA-218ENST00000607814 FCAMRQ8WWV6 532 aa10.42□□□□□ -0.74
CTSA-218ENST00000607814 TMEM68Q96MH6 324 aa10.42□□□□□ -0.74
CTSA-218ENST00000607814 EDA2RQ9HAV5 297 aa10.42□□□□□ -0.74
CTSA-218ENST00000607814 AKIP1Q9NQ31 210 aa10.42□□□□□ -0.74
CTSA-218ENST00000607814 TMEM140Q9NV12 185 aa10.42□□□□□ -0.74
CTSA-218ENST00000607814 A0A0G2JLM5 398 aa10.41□□□□□ -0.74
CTSA-218ENST00000607814 H3BUA1 57 aa10.41□□□□□ -0.74
CTSA-218ENST00000607814 GPR31O00270 319 aa10.41□□□□□ -0.74
CTSA-218ENST00000607814 UPK2O00526 184 aa10.41□□□□□ -0.74
CTSA-218ENST00000607814 KRASP01116 189 aa10.41□□□□□ -0.74
CTSA-218ENST00000607814 HLA-GP17693 338 aa10.41□□□□□ -0.74
CTSA-218ENST00000607814 G6PCP35575 357 aa10.41□□□□□ -0.74
CTSA-218ENST00000607814 RPL8P62917 257 aaKnown RBP10.41□□□□□ -0.74
CTSA-218ENST00000607814 ZNF585BQ52M93 769 aa10.41□□□□□ -0.74
CTSA-218ENST00000607814 TTC9CQ8N5M4 171 aa10.41□□□□□ -0.74
CTSA-218ENST00000607814 VSTM2AQ8TAG5 236 aa10.41□□□□□ -0.74
CTSA-218ENST00000607814 DYNC2LI1Q8TCX1 351 aa10.41□□□□□ -0.74
CTSA-218ENST00000607814 SPIN2AQ99865 258 aa10.41□□□□□ -0.74
CTSA-218ENST00000607814 SPIN2BQ9BPZ2 258 aa10.41□□□□□ -0.74
CTSA-218ENST00000607814 TM2D3Q9BRN9 247 aa10.41□□□□□ -0.74
CTSA-218ENST00000607814 RSRP1Q9BUV0 290 aa10.41□□□□□ -0.74
CTSA-218ENST00000607814 NDUFA13Q9P0J0 144 aa10.41□□□□□ -0.74
CTSA-218ENST00000607814 DPPA5A6NC42 116 aa10.4□□□□□ -0.74
CTSA-218ENST00000607814 CREBL2O60519 120 aaPredicted RBP10.4□□□□□ -0.74
CTSA-218ENST00000607814 JTBO76095 146 aa10.4□□□□□ -0.74
CTSA-218ENST00000607814 NDUFB8O95169 186 aa10.4□□□□□ -0.74
CTSA-218ENST00000607814 HLA-AP01891 365 aaKnown RBP10.4□□□□□ -0.74
CTSA-218ENST00000607814 NQO2P16083 231 aa10.4□□□□□ -0.74
CTSA-218ENST00000607814 TMBIM6P55061 237 aa10.4□□□□□ -0.74
CTSA-218ENST00000607814 SYNJ2BPP57105 145 aa10.4□□□□□ -0.74
CTSA-218ENST00000607814 TAS2R31P59538 309 aa10.4□□□□□ -0.74
CTSA-218ENST00000607814 ATP5G2Q06055 141 aa10.4□□□□□ -0.74
CTSA-218ENST00000607814 FAAP20Q6NZ36 180 aa10.4□□□□□ -0.74
CTSA-218ENST00000607814 ZNF343Q6P1L6 599 aa10.4□□□□□ -0.74
CTSA-218ENST00000607814 ADAMTSL5Q6ZMM2 481 aa10.4□□□□□ -0.74
CTSA-218ENST00000607814 TBC1D26Q86UD7 250 aa10.4□□□□□ -0.74
CTSA-218ENST00000607814 OR10W1Q8NGF6 305 aa10.4□□□□□ -0.74
CTSA-218ENST00000607814 RAB2BQ8WUD1 216 aa10.4□□□□□ -0.74
CTSA-218ENST00000607814 DGCR14Q96DF8 476 aaKnown RBP10.4□□□□□ -0.74
CTSA-218ENST00000607814 C6orf62Q9GZU0 229 aaPredicted RBP10.4□□□□□ -0.74
CTSA-218ENST00000607814 RANGRFQ9HD47 186 aaPredicted RBP10.4□□□□□ -0.74
CTSA-218ENST00000607814 SLC2A9Q9NRM0 540 aa10.4□□□□□ -0.74
CTSA-218ENST00000607814 BET1LQ9NYM9 111 aa10.4□□□□□ -0.74
CTSA-218ENST00000607814 PEF1Q9UBV8 284 aaKnown RBP10.4□□□□□ -0.74
CTSA-218ENST00000607814 PPP5D1E7EU14 171 aa10.39□□□□□ -0.75
CTSA-218ENST00000607814 H3BMQ9 156 aa10.39□□□□□ -0.75
CTSA-218ENST00000607814 RBFOX2O43251 390 aaKnown RBP eCLIP10.39□□□□□ -0.75
CTSA-218ENST00000607814 ZNF735P0CB33 412 aa10.39□□□□□ -0.75
CTSA-218ENST00000607814 SPNP16150 400 aa10.39□□□□□ -0.75
CTSA-218ENST00000607814 F2RP25116 425 aa10.39□□□□□ -0.75
CTSA-218ENST00000607814 OR2B8PP59922 312 aa10.39□□□□□ -0.75
CTSA-218ENST00000607814 EXOSC2Q13868 293 aaKnown RBP10.39□□□□□ -0.75
CTSA-218ENST00000607814 C15orf32Q32M92 178 aa10.39□□□□□ -0.75
CTSA-218ENST00000607814 ACSM6Q6P461 480 aa10.39□□□□□ -0.75
CTSA-218ENST00000607814 CMTM1Q8IZ96 169 aa10.39□□□□□ -0.75
CTSA-218ENST00000607814 USMG5Q96IX5 58 aa10.39□□□□□ -0.75
CTSA-218ENST00000607814 HINT2Q9BX68 163 aa10.39□□□□□ -0.75
CTSA-218ENST00000607814 PLEKHA2Q9HB19 425 aa10.39□□□□□ -0.75
CTSA-218ENST00000607814 ZC4H2Q9NQZ6 224 aa10.39□□□□□ -0.75
CTSA-218ENST00000607814 MTFP1Q9UDX5 166 aa10.39□□□□□ -0.75
CTSA-218ENST00000607814 FBXL7Q9UJT9 491 aa10.39□□□□□ -0.75
CTSA-218ENST00000607814 SELENOKQ9Y6D0 94 aa10.39□□□□□ -0.75
CTSA-218ENST00000607814 CEPT1Q9Y6K0 416 aa10.39□□□□□ -0.75
CTSA-218ENST00000607814 TRBV9A0A0B4J1U6 114 aa10.38□□□□□ -0.75
CTSA-218ENST00000607814 TEX50A0A1B0GTY4 177 aa10.38□□□□□ -0.75
CTSA-218ENST00000607814 CCDC160A6NGH7 325 aa10.38□□□□□ -0.75
CTSA-218ENST00000607814 DBX1A6NMT0 343 aa10.38□□□□□ -0.75
CTSA-218ENST00000607814 IFNA6P05013 189 aa10.38□□□□□ -0.75
CTSA-218ENST00000607814 PGAM2P15259 253 aa10.38□□□□□ -0.75
CTSA-218ENST00000607814 EDN2P20800 178 aa10.38□□□□□ -0.75
CTSA-218ENST00000607814 PSMB6P28072 239 aa10.38□□□□□ -0.75
CTSA-218ENST00000607814 PPP5CP53041 499 aa10.38□□□□□ -0.75
CTSA-218ENST00000607814 SCGB2B2Q4G0G5 96 aa10.38□□□□□ -0.75
CTSA-218ENST00000607814 RNASE10Q5GAN6 216 aaKnown RBP10.38□□□□□ -0.75
CTSA-218ENST00000607814 OR4A5Q8NH83 315 aa10.38□□□□□ -0.75
CTSA-218ENST00000607814 DIRAS2Q96HU8 199 aa10.38□□□□□ -0.75
CTSA-218ENST00000607814 FANCD2OSQ96PS1 177 aa10.38□□□□□ -0.75
CTSA-218ENST00000607814 SLIRPQ9GZT3 109 aaKnown RBP10.38□□□□□ -0.75
CTSA-218ENST00000607814 PLECQ15149 4684 aaKnown RBP10.37□□□□□ -0.75
CTSA-218ENST00000607814 FRAS1Q86XX4 4008 aa10.37□□□□□ -0.75
CTSA-218ENST00000607814 MARCH11A6NNE9 402 aa10.37□□□□□ -0.75
CTSA-218ENST00000607814 BMPR1BO00238 502 aa10.37□□□□□ -0.75
CTSA-218ENST00000607814 NOL3O60936 208 aaKnown RBP10.37□□□□□ -0.75
CTSA-218ENST00000607814 BRI3O95415 125 aa10.37□□□□□ -0.75
CTSA-218ENST00000607814 IGKV1-39P01597 117 aa10.37□□□□□ -0.75
CTSA-218ENST00000607814 IGKV1D-39P04432 117 aa10.37□□□□□ -0.75
CTSA-218ENST00000607814 MAS1LP35410 378 aa10.37□□□□□ -0.75
CTSA-218ENST00000607814 KLF5Q13887 457 aaPredicted RBP10.37□□□□□ -0.75
CTSA-218ENST00000607814 IL18Q14116 193 aa10.37□□□□□ -0.75
CTSA-218ENST00000607814 POU2AF1Q16633 256 aa10.37□□□□□ -0.75
CTSA-218ENST00000607814 IZUMO4Q1ZYL8 232 aa10.37□□□□□ -0.75
CTSA-218ENST00000607814 IL34Q6ZMJ4 242 aa10.37□□□□□ -0.75
CTSA-218ENST00000607814 CD300LFQ8TDQ1 290 aa10.37□□□□□ -0.75
CTSA-218ENST00000607814 OR4C12Q96R67 309 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms