RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 PRTFDC1Q9NRG1 225 aa3.37□□□□□ -1.87
HMGB1P50-201ENST00000605814 FGF21Q9NSA1 209 aa3.37□□□□□ -1.87
HMGB1P50-201ENST00000605814 JKAMPQ9P055 326 aa3.37□□□□□ -1.87
HMGB1P50-201ENST00000605814 ABI3Q9P2A4 366 aa3.37□□□□□ -1.87
HMGB1P50-201ENST00000605814 NPIPA1Q9UND3 350 aa3.37□□□□□ -1.87
HMGB1P50-201ENST00000605814 WASHC3Q9Y3C0 194 aa3.37□□□□□ -1.87
HMGB1P50-201ENST00000605814 PCDH15Q96QU1 1955 aa3.37□□□□□ -1.87
HMGB1P50-201ENST00000605814 MUC22E2RYF6 1773 aaPredicted RBP3.37□□□□□ -1.87
HMGB1P50-201ENST00000605814 NOTCH4Q99466 2003 aa3.36□□□□□ -1.87
HMGB1P50-201ENST00000605814 TRAV38-1A0A0B4J264 116 aa3.36□□□□□ -1.87
HMGB1P50-201ENST00000605814 TRAV34A0A0B4J273 112 aa3.36□□□□□ -1.87
HMGB1P50-201ENST00000605814 CCL15-CCL14A0A0B4J2E2 113 aa3.36□□□□□ -1.87
HMGB1P50-201ENST00000605814 MUC21A0A0G2JKD1 596 aa3.36□□□□□ -1.87
HMGB1P50-201ENST00000605814 MUC21A0A140T8X8 626 aa3.36□□□□□ -1.87
HMGB1P50-201ENST00000605814 C7orf71A4D174 169 aa3.36□□□□□ -1.87
HMGB1P50-201ENST00000605814 OR4C46A6NHA9 309 aa3.36□□□□□ -1.87
HMGB1P50-201ENST00000605814 LRRC30A6NM36 301 aa3.36□□□□□ -1.87
HMGB1P50-201ENST00000605814 ANKRD30BLA7E2S9 258 aa3.36□□□□□ -1.87
HMGB1P50-201ENST00000605814 F8W1H4 67 aa3.36□□□□□ -1.87
HMGB1P50-201ENST00000605814 NPIPA3F8WFD2 350 aa3.36□□□□□ -1.87
HMGB1P50-201ENST00000605814 SYS1-DBNDD2H3BUS1 97 aa3.36□□□□□ -1.87
HMGB1P50-201ENST00000605814 F2RL2O00254 374 aa3.36□□□□□ -1.87
HMGB1P50-201ENST00000605814 ZNF207O43670 478 aaKnown RBP3.36□□□□□ -1.87
HMGB1P50-201ENST00000605814 EML2O95834 649 aa3.36□□□□□ -1.87
HMGB1P50-201ENST00000605814 CXorf1O96002 111 aa3.36□□□□□ -1.87
HMGB1P50-201ENST00000605814 HAND1O96004 215 aa3.36□□□□□ -1.87
HMGB1P50-201ENST00000605814 HBZP02008 142 aa3.36□□□□□ -1.87
HMGB1P50-201ENST00000605814 APCSP02743 223 aa3.36□□□□□ -1.87
HMGB1P50-201ENST00000605814 IGKV3-11P04433 115 aa3.36□□□□□ -1.87
HMGB1P50-201ENST00000605814 SERPINE2P07093 398 aa3.36□□□□□ -1.87
HMGB1P50-201ENST00000605814 LINC00271P0C7V0 271 aa3.36□□□□□ -1.87
HMGB1P50-201ENST00000605814 FTH1P19P0C7X4 201 aa3.36□□□□□ -1.87
HMGB1P50-201ENST00000605814 CYBAP13498 195 aa3.36□□□□□ -1.87
HMGB1P50-201ENST00000605814 OPRK1P41145 380 aa3.36□□□□□ -1.87
HMGB1P50-201ENST00000605814 P2RY2P41231 377 aa3.36□□□□□ -1.87
HMGB1P50-201ENST00000605814 RAB9AP51151 201 aa3.36□□□□□ -1.87
HMGB1P50-201ENST00000605814 PLP1P60201 277 aa3.36□□□□□ -1.87
HMGB1P50-201ENST00000605814 RPS18P62269 152 aaKnown RBP3.36□□□□□ -1.87
HMGB1P50-201ENST00000605814 SSBP2P81877 361 aaPredicted RBP3.36□□□□□ -1.87
HMGB1P50-201ENST00000605814 FOXF2Q12947 444 aa3.36□□□□□ -1.87
HMGB1P50-201ENST00000605814 PSG7Q13046 419 aa3.36□□□□□ -1.87
HMGB1P50-201ENST00000605814 ZNF77Q15935 545 aa3.36□□□□□ -1.87
HMGB1P50-201ENST00000605814 TNXAQ16473 311 aa3.36□□□□□ -1.87
HMGB1P50-201ENST00000605814 CCL14Q16627 93 aa3.36□□□□□ -1.87
HMGB1P50-201ENST00000605814 CCL15Q16663 113 aa3.36□□□□□ -1.87
HMGB1P50-201ENST00000605814 KRTAP27-1Q3LI81 207 aa3.36□□□□□ -1.87
HMGB1P50-201ENST00000605814 ZNF585BQ52M93 769 aa3.36□□□□□ -1.87
HMGB1P50-201ENST00000605814 C19orf54Q5BKX5 351 aa3.36□□□□□ -1.87
HMGB1P50-201ENST00000605814 MUC21Q5SSG8 566 aa3.36□□□□□ -1.87
HMGB1P50-201ENST00000605814 C10orf128Q5T292 105 aa3.36□□□□□ -1.87
HMGB1P50-201ENST00000605814 PLCXD3Q63HM9 321 aa3.36□□□□□ -1.87
HMGB1P50-201ENST00000605814 FAM180AQ6UWF9 173 aa3.36□□□□□ -1.87
HMGB1P50-201ENST00000605814 ZNF818PQ6ZRF7 136 aa3.36□□□□□ -1.87
HMGB1P50-201ENST00000605814 FAM231DQ6ZW35 169 aa3.36□□□□□ -1.87
HMGB1P50-201ENST00000605814 SYT13Q7L8C5 426 aa3.36□□□□□ -1.87
HMGB1P50-201ENST00000605814 ERASQ7Z444 233 aa3.36□□□□□ -1.87
HMGB1P50-201ENST00000605814 ZNF645Q8N7E2 425 aa3.36□□□□□ -1.87
HMGB1P50-201ENST00000605814 NHLRC2Q8NBF2 726 aa3.36□□□□□ -1.87
HMGB1P50-201ENST00000605814 GJC3Q8NFK1 279 aa3.36□□□□□ -1.87
HMGB1P50-201ENST00000605814 PIFOQ8TCI5 191 aa3.36□□□□□ -1.87
HMGB1P50-201ENST00000605814 GATAD1Q8WUU5 269 aa3.36□□□□□ -1.87
HMGB1P50-201ENST00000605814 RNF138Q8WVD3 245 aa3.36□□□□□ -1.87
HMGB1P50-201ENST00000605814 FAM131CQ96AQ9 280 aa3.36□□□□□ -1.87
HMGB1P50-201ENST00000605814 DNAJA3Q96EY1 480 aa3.36□□□□□ -1.87
HMGB1P50-201ENST00000605814 CYYR1Q96J86 154 aa3.36□□□□□ -1.87
HMGB1P50-201ENST00000605814 FAM103A1Q9BTL3 118 aaKnown RBP3.36□□□□□ -1.87
HMGB1P50-201ENST00000605814 LINC00470Q9BZP3 86 aa3.36□□□□□ -1.87
HMGB1P50-201ENST00000605814 CHRNA10Q9GZZ6 450 aa3.36□□□□□ -1.87
HMGB1P50-201ENST00000605814 OR2D2Q9H210 308 aa3.36□□□□□ -1.87
HMGB1P50-201ENST00000605814 SAP30LQ9HAJ7 183 aa3.36□□□□□ -1.87
HMGB1P50-201ENST00000605814 CCL28Q9NRJ3 127 aa3.36□□□□□ -1.87
HMGB1P50-201ENST00000605814 ALKBH4Q9NXW9 302 aa3.36□□□□□ -1.87
HMGB1P50-201ENST00000605814 MTCH1Q9NZJ7 389 aa3.36□□□□□ -1.87
HMGB1P50-201ENST00000605814 COPS7AQ9UBW8 275 aa3.36□□□□□ -1.87
HMGB1P50-201ENST00000605814 NAT8BQ9UHF3 227 aa3.36□□□□□ -1.87
HMGB1P50-201ENST00000605814 RARRES3Q9UL19 164 aa3.36□□□□□ -1.87
HMGB1P50-201ENST00000605814 WDR83OSQ9Y284 106 aa3.36□□□□□ -1.87
HMGB1P50-201ENST00000605814 OR2W1Q9Y3N9 320 aa3.36□□□□□ -1.87
HMGB1P50-201ENST00000605814 RP1P56715 2156 aa3.36□□□□□ -1.87
HMGB1P50-201ENST00000605814 ARHGEF17Q96PE2 2063 aaPredicted RBP3.35□□□□□ -1.87
HMGB1P50-201ENST00000605814 SPAG17Q6Q759 2223 aa3.35□□□□□ -1.87
HMGB1P50-201ENST00000605814 TRAV26-1A0A087WT03 109 aa3.35□□□□□ -1.87
HMGB1P50-201ENST00000605814 IGLV3-32A0A0A0MS00 114 aa3.35□□□□□ -1.87
HMGB1P50-201ENST00000605814 IGKV1D-13A0A0B4J2D9 117 aa3.35□□□□□ -1.87
HMGB1P50-201ENST00000605814 A0A0G2JRQ6 117 aa3.35□□□□□ -1.87
HMGB1P50-201ENST00000605814 A0A0J9YY10 115 aa3.35□□□□□ -1.87
HMGB1P50-201ENST00000605814 A0A1B0GX78 115 aa3.35□□□□□ -1.87
HMGB1P50-201ENST00000605814 C17orf51A8MQB3 221 aa3.35□□□□□ -1.87
HMGB1P50-201ENST00000605814 C21orf140B9A014 251 aa3.35□□□□□ -1.87
HMGB1P50-201ENST00000605814 E9PLN8 166 aa3.35□□□□□ -1.87
HMGB1P50-201ENST00000605814 FNDC10F2Z333 226 aa3.35□□□□□ -1.87
HMGB1P50-201ENST00000605814 H0YIG0 161 aa3.35□□□□□ -1.87
HMGB1P50-201ENST00000605814 K7EN84 100 aa3.35□□□□□ -1.87
HMGB1P50-201ENST00000605814 M0R296 226 aa3.35□□□□□ -1.87
HMGB1P50-201ENST00000605814 TNFSF11O14788 317 aa3.35□□□□□ -1.87
HMGB1P50-201ENST00000605814 RAB29O14966 203 aa3.35□□□□□ -1.87
HMGB1P50-201ENST00000605814 RER1O15258 196 aa3.35□□□□□ -1.87
HMGB1P50-201ENST00000605814 HMGB3O15347 200 aaKnown RBP3.35□□□□□ -1.87
HMGB1P50-201ENST00000605814 TLX3O43711 291 aaPredicted RBP3.35□□□□□ -1.87
HMGB1P50-201ENST00000605814 GNG7O60262 68 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms