RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 MFAP4P55083 255 aa8.24□□□□□ -1.09
CSMD1-217ENST00000602723 PLSCR2Q9NRY7 297 aa8.24□□□□□ -1.09
CSMD1-217ENST00000602723 MBD1Q9UIS9 605 aaPredicted RBP8.24□□□□□ -1.09
CSMD1-217ENST00000602723 RECKO95980 971 aa8.24□□□□□ -1.09
CSMD1-217ENST00000602723 UCP2P55851 309 aa8.24□□□□□ -1.09
CSMD1-217ENST00000602723 CALYQ9NYX4 217 aa8.24□□□□□ -1.09
CSMD1-217ENST00000602723 TRBV20OR9-2A0A075B6H5 130 aa8.24□□□□□ -1.09
CSMD1-217ENST00000602723 TRAV30A0A087WSZ9 112 aa8.24□□□□□ -1.09
CSMD1-217ENST00000602723 TCF23Q7RTU1 214 aa8.24□□□□□ -1.09
CSMD1-217ENST00000602723 NIT1Q86X76 327 aa8.24□□□□□ -1.09
CSMD1-217ENST00000602723 MBD3L1Q8WWY6 194 aa8.24□□□□□ -1.09
CSMD1-217ENST00000602723 LINC00470Q9BZP3 86 aa8.24□□□□□ -1.09
CSMD1-217ENST00000602723 LHFPL6Q9Y693 200 aa8.24□□□□□ -1.09
CSMD1-217ENST00000602723 H3BTX0 84 aa8.24□□□□□ -1.09
CSMD1-217ENST00000602723 UNQ5815/PRO19632Q6UWF5 114 aa8.24□□□□□ -1.09
CSMD1-217ENST00000602723 GPR146Q96CH1 333 aa8.24□□□□□ -1.09
CSMD1-217ENST00000602723 RCC1LQ96I51 464 aaKnown RBP8.24□□□□□ -1.09
CSMD1-217ENST00000602723 TRBV5-7A0A0A0MS05 114 aa8.24□□□□□ -1.09
CSMD1-217ENST00000602723 GCHFRP30047 84 aa8.24□□□□□ -1.09
CSMD1-217ENST00000602723 OR11H4Q8NGC9 324 aa8.24□□□□□ -1.09
CSMD1-217ENST00000602723 ZSWIM8A7E2V4 1837 aa8.24□□□□□ -1.09
CSMD1-217ENST00000602723 ZNF658BQ4V348 819 aaPredicted RBP8.24□□□□□ -1.09
CSMD1-217ENST00000602723 CYB5R2Q6BCY4 276 aa8.24□□□□□ -1.09
CSMD1-217ENST00000602723 C14orf144Q96I85 54 aa8.24□□□□□ -1.09
CSMD1-217ENST00000602723 FOXC2Q99958 501 aa8.24□□□□□ -1.09
CSMD1-217ENST00000602723 GSN-AS1Q9NRJ2 163 aa8.24□□□□□ -1.09
CSMD1-217ENST00000602723 MYO9AB2RTY4 2548 aa8.23□□□□□ -1.09
CSMD1-217ENST00000602723 VENTXO95231 258 aa8.23□□□□□ -1.09
CSMD1-217ENST00000602723 IL11P20809 199 aa8.23□□□□□ -1.09
CSMD1-217ENST00000602723 ATP5G2Q06055 141 aa8.23□□□□□ -1.09
CSMD1-217ENST00000602723 POC1AQ8NBT0 407 aa8.23□□□□□ -1.09
CSMD1-217ENST00000602723 A0A1B0GWB2 263 aa8.23□□□□□ -1.09
CSMD1-217ENST00000602723 MEF2CQ06413 473 aaPredicted RBP8.23□□□□□ -1.09
CSMD1-217ENST00000602723 FNDC1Q4ZHG4 1894 aaPredicted RBP8.23□□□□□ -1.09
CSMD1-217ENST00000602723 TMEM229AB2RXF0 380 aa8.23□□□□□ -1.09
CSMD1-217ENST00000602723 ITGBL1O95965 494 aaPredicted RBP8.23□□□□□ -1.09
CSMD1-217ENST00000602723 C2orf68Q2NKX9 166 aa8.23□□□□□ -1.09
CSMD1-217ENST00000602723 TMEM170BQ5T4T1 132 aa8.23□□□□□ -1.09
CSMD1-217ENST00000602723 Q96M66 194 aa8.23□□□□□ -1.09
CSMD1-217ENST00000602723 SFXN3Q9BWM7 321 aa8.23□□□□□ -1.09
CSMD1-217ENST00000602723 LCN2P80188 198 aa8.23□□□□□ -1.09
CSMD1-217ENST00000602723 FAM106AQ4KMX7 169 aa8.23□□□□□ -1.09
CSMD1-217ENST00000602723 C1orf100Q5SVJ3 147 aa8.23□□□□□ -1.09
CSMD1-217ENST00000602723 CLEC2AQ6UVW9 174 aa8.23□□□□□ -1.09
CSMD1-217ENST00000602723 SHISA5Q8N114 240 aa8.23□□□□□ -1.09
CSMD1-217ENST00000602723 EML5Q05BV3 1969 aa8.23□□□□□ -1.09
CSMD1-217ENST00000602723 SNAI3Q3KNW1 292 aa8.23□□□□□ -1.09
CSMD1-217ENST00000602723 SSBP3Q9BWW4 388 aaPredicted RBP8.23□□□□□ -1.09
CSMD1-217ENST00000602723 SAXO1Q8IYX7 474 aa8.23□□□□□ -1.09
CSMD1-217ENST00000602723 MARVELD3Q96A59 401 aa8.23□□□□□ -1.09
CSMD1-217ENST00000602723 NPCDR1Q9BY65 106 aa8.23□□□□□ -1.09
CSMD1-217ENST00000602723 FOXI3A8MTJ6 420 aaPredicted RBP8.23□□□□□ -1.09
CSMD1-217ENST00000602723 ZNF146Q15072 292 aa8.23□□□□□ -1.09
CSMD1-217ENST00000602723 ZNF826PQ6ZT77 177 aa8.23□□□□□ -1.09
CSMD1-217ENST00000602723 TMEM52Q8NDY8 209 aa8.23□□□□□ -1.09
CSMD1-217ENST00000602723 ITLN1Q8WWA0 313 aa8.23□□□□□ -1.09
CSMD1-217ENST00000602723 C18orf15Q96N68 181 aa8.23□□□□□ -1.09
CSMD1-217ENST00000602723 RRHO14718 337 aa8.23□□□□□ -1.09
CSMD1-217ENST00000602723 OR13C6PQ8NH95 151 aa8.23□□□□□ -1.09
CSMD1-217ENST00000602723 TMEM171Q8WVE6 324 aa8.23□□□□□ -1.09
CSMD1-217ENST00000602723 A0A0G2JMZ2 1700 aa8.23□□□□□ -1.09
CSMD1-217ENST00000602723 LRRC37A2A6NM11 1700 aa8.23□□□□□ -1.09
CSMD1-217ENST00000602723 LRRC37AA6NMS7 1700 aa8.23□□□□□ -1.09
CSMD1-217ENST00000602723 NPFFO15130 113 aa8.23□□□□□ -1.09
CSMD1-217ENST00000602723 FUT5Q11128 374 aa8.23□□□□□ -1.09
CSMD1-217ENST00000602723 ZNF818PQ6ZRF7 136 aa8.23□□□□□ -1.09
CSMD1-217ENST00000602723 PCDH15Q96QU1 1955 aa8.22□□□□□ -1.09
CSMD1-217ENST00000602723 C1orf185Q5T7R7 199 aa8.22□□□□□ -1.09
CSMD1-217ENST00000602723 LAMTOR1Q6IAA8 161 aa8.22□□□□□ -1.09
CSMD1-217ENST00000602723 NOTCH2Q04721 2471 aa8.22□□□□□ -1.09
CSMD1-217ENST00000602723 TCF19Q9Y242 345 aa8.22□□□□□ -1.09
CSMD1-217ENST00000602723 IGKV1-8A0A0C4DH67 115 aa8.22□□□□□ -1.09
CSMD1-217ENST00000602723 GPR6P46095 362 aaPredicted RBP8.22□□□□□ -1.09
CSMD1-217ENST00000602723 HSPE1P61604 102 aaKnown RBP8.22□□□□□ -1.09
CSMD1-217ENST00000602723 OR5A1Q8NGJ0 315 aa8.22□□□□□ -1.09
CSMD1-217ENST00000602723 NEUROG1Q92886 237 aa8.22□□□□□ -1.09
CSMD1-217ENST00000602723 PGPEP1Q9NXJ5 209 aa8.22□□□□□ -1.09
CSMD1-217ENST00000602723 PKIBQ9C010 78 aa8.22□□□□□ -1.09
CSMD1-217ENST00000602723 ZG16O60844 167 aa8.22□□□□□ -1.09
CSMD1-217ENST00000602723 TGIF1Q15583 401 aa8.22□□□□□ -1.09
CSMD1-217ENST00000602723 LDLRAD4O15165 306 aa8.22□□□□□ -1.09
CSMD1-217ENST00000602723 PTGDSP41222 190 aa8.22□□□□□ -1.09
CSMD1-217ENST00000602723 LEAP2Q969E1 77 aa8.22□□□□□ -1.09
CSMD1-217ENST00000602723 CA1P00915 261 aaPredicted RBP8.22□□□□□ -1.09
CSMD1-217ENST00000602723 CD8AP01732 235 aa8.22□□□□□ -1.09
CSMD1-217ENST00000602723 ST6GALNAC6Q969X2 333 aa8.22□□□□□ -1.09
CSMD1-217ENST00000602723 PLXNA2O75051 1894 aa8.22□□□□□ -1.09
CSMD1-217ENST00000602723 WDR87Q6ZQQ6 2873 aa8.22□□□□□ -1.09
CSMD1-217ENST00000602723 IFNL4K9M1U5 179 aa8.22□□□□□ -1.09
CSMD1-217ENST00000602723 ZNF708P17019 499 aa8.22□□□□□ -1.09
CSMD1-217ENST00000602723 CACNG7P62955 275 aa8.22□□□□□ -1.09
CSMD1-217ENST00000602723 VCX2Q9H322 139 aa8.22□□□□□ -1.09
CSMD1-217ENST00000602723 CEACAM4O75871 244 aa8.21□□□□□ -1.09
CSMD1-217ENST00000602723 IGHV3-48P01763 117 aa8.21□□□□□ -1.09
CSMD1-217ENST00000602723 EFNB1P98172 346 aa8.21□□□□□ -1.09
CSMD1-217ENST00000602723 TMEM187Q14656 261 aa8.21□□□□□ -1.09
CSMD1-217ENST00000602723 LINC00305Q7Z4B0 112 aa8.21□□□□□ -1.09
CSMD1-217ENST00000602723 SIPA1L1O43166 1804 aa8.21□□□□□ -1.09
CSMD1-217ENST00000602723 FOXS1O43638 330 aa8.21□□□□□ -1.09
CSMD1-217ENST00000602723 NUDT10Q8NFP7 164 aa8.21□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms