RNA–Protein interactions for RNA: ENST00000602655.5

PPFIA3-206, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 3,493 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-206ENST00000602655 SMAGPQ0VAQ4 97 aa12.91□□□□□ -0.34
PPFIA3-206ENST00000602655 FOXF2Q12947 444 aa12.91□□□□□ -0.34
PPFIA3-206ENST00000602655 ZNF818PQ6ZRF7 136 aa12.91□□□□□ -0.34
PPFIA3-206ENST00000602655 HAPLN4Q86UW8 402 aa12.91□□□□□ -0.34
PPFIA3-206ENST00000602655 BORCS8Q96FH0 119 aa12.91□□□□□ -0.34
PPFIA3-206ENST00000602655 RAB40CQ96S21 281 aa12.91□□□□□ -0.34
PPFIA3-206ENST00000602655 CHRDL1Q9BU40 450 aa12.91□□□□□ -0.34
PPFIA3-206ENST00000602655 SERTAD4Q9NUC0 356 aa12.91□□□□□ -0.34
PPFIA3-206ENST00000602655 TMEM38BQ9NVV0 291 aa12.91□□□□□ -0.34
PPFIA3-206ENST00000602655 CLCF1Q9UBD9 225 aa12.91□□□□□ -0.34
PPFIA3-206ENST00000602655 HS3ST1O14792 307 aa12.9□□□□□ -0.34
PPFIA3-206ENST00000602655 CELA3BP08861 270 aa12.9□□□□□ -0.34
PPFIA3-206ENST00000602655 LINC00310P59036 64 aa12.9□□□□□ -0.34
PPFIA3-206ENST00000602655 PRDX4Q13162 271 aa12.9□□□□□ -0.34
PPFIA3-206ENST00000602655 HIST3H3Q16695 136 aa12.9□□□□□ -0.34
PPFIA3-206ENST00000602655 VWA1Q6PCB0 445 aa12.9□□□□□ -0.34
PPFIA3-206ENST00000602655 OR8I2Q8N0Y5 310 aa12.9□□□□□ -0.34
PPFIA3-206ENST00000602655 ZADH2Q8N4Q0 377 aa12.9□□□□□ -0.34
PPFIA3-206ENST00000602655 ZNF525Q8N782 197 aa12.9□□□□□ -0.34
PPFIA3-206ENST00000602655 OR10P1Q8NGE3 313 aa12.9□□□□□ -0.34
PPFIA3-206ENST00000602655 SARAFQ96BY9 339 aa12.9□□□□□ -0.34
PPFIA3-206ENST00000602655 CLEC5AQ9NY25 188 aa12.9□□□□□ -0.34
PPFIA3-206ENST00000602655 MRPS16Q9Y3D3 137 aaKnown RBP12.9□□□□□ -0.34
PPFIA3-206ENST00000602655 A0A1W2PPV4 95 aa12.9□□□□□ -0.34
PPFIA3-206ENST00000602655 VENTXO95231 258 aa12.9□□□□□ -0.34
PPFIA3-206ENST00000602655 SRIP30626 198 aa12.9□□□□□ -0.34
PPFIA3-206ENST00000602655 OR1F12Q8NHA8 337 aa12.9□□□□□ -0.34
PPFIA3-206ENST00000602655 IL1F10Q8WWZ1 152 aa12.9□□□□□ -0.34
PPFIA3-206ENST00000602655 TAAR6Q96RI8 345 aa12.9□□□□□ -0.34
PPFIA3-206ENST00000602655 NAA38Q9BRA0 125 aaKnown RBP12.9□□□□□ -0.34
PPFIA3-206ENST00000602655 MUC21A0A0G2JKD1 596 aa12.9□□□□□ -0.34
PPFIA3-206ENST00000602655 MUC21A0A140T8X8 626 aa12.9□□□□□ -0.34
PPFIA3-206ENST00000602655 CTXND1A0A1B0GTU2 59 aa12.9□□□□□ -0.34
PPFIA3-206ENST00000602655 RBFOX2O43251 390 aaKnown RBP eCLIP12.9□□□□□ -0.346e-8■■■□□ 15.7
PPFIA3-206ENST00000602655 MT-CO2P00403 227 aa12.9□□□□□ -0.34
PPFIA3-206ENST00000602655 IGHMP01871 453 aa12.9□□□□□ -0.34
PPFIA3-206ENST00000602655 CTRLP40313 264 aa12.9□□□□□ -0.34
PPFIA3-206ENST00000602655 MUC21Q5SSG8 566 aa12.9□□□□□ -0.34
PPFIA3-206ENST00000602655 MRPL54Q6P161 138 aaKnown RBP12.9□□□□□ -0.34
PPFIA3-206ENST00000602655 TAAR3PQ9P1P4 343 aa12.9□□□□□ -0.34
PPFIA3-206ENST00000602655 CTSSP25774 331 aa12.89□□□□□ -0.35
PPFIA3-206ENST00000602655 ZNF841Q6ZN19 808 aa12.89□□□□□ -0.35
PPFIA3-206ENST00000602655 RNF138Q8WVD3 245 aa12.89□□□□□ -0.35
PPFIA3-206ENST00000602655 ABHD17AQ96GS6 310 aa12.89□□□□□ -0.35
PPFIA3-206ENST00000602655 Q96M66 194 aa12.89□□□□□ -0.35
PPFIA3-206ENST00000602655 CDC42EP3Q9UKI2 254 aa12.89□□□□□ -0.35
PPFIA3-206ENST00000602655 IGLC7A0M8Q6 106 aa12.89□□□□□ -0.35
PPFIA3-206ENST00000602655 WNT2P09544 360 aa12.89□□□□□ -0.35
PPFIA3-206ENST00000602655 CTXN2P0C2S0 81 aa12.89□□□□□ -0.35
PPFIA3-206ENST00000602655 LYZL4Q96KX0 146 aa12.89□□□□□ -0.35
PPFIA3-206ENST00000602655 GTSF1LQ9H1H1 148 aa12.89□□□□□ -0.35
PPFIA3-206ENST00000602655 FNDC4Q9H6D8 234 aaPredicted RBP12.89□□□□□ -0.35
PPFIA3-206ENST00000602655 COX5AP20674 150 aa12.89□□□□□ -0.35
PPFIA3-206ENST00000602655 PSG9Q00887 426 aa12.89□□□□□ -0.35
PPFIA3-206ENST00000602655 FOXL1Q12952 345 aa12.89□□□□□ -0.35
PPFIA3-206ENST00000602655 RSPO1Q2MKA7 263 aaPredicted RBP12.89□□□□□ -0.35
PPFIA3-206ENST00000602655 LRRC75BQ2VPJ9 315 aa12.89□□□□□ -0.35
PPFIA3-206ENST00000602655 OR5P3Q8WZ94 311 aa12.89□□□□□ -0.35
PPFIA3-206ENST00000602655 NABP1Q96AH0 204 aa12.89□□□□□ -0.35
PPFIA3-206ENST00000602655 RCHY1Q96PM5 261 aa12.89□□□□□ -0.35
PPFIA3-206ENST00000602655 MOB1AQ9H8S9 216 aa12.89□□□□□ -0.35
PPFIA3-206ENST00000602655 LRBAP50851 2863 aa12.88□□□□□ -0.35
PPFIA3-206ENST00000602655 A0A0G2JRQ6 117 aa12.88□□□□□ -0.35
PPFIA3-206ENST00000602655 S1PR2O95136 353 aa12.88□□□□□ -0.35
PPFIA3-206ENST00000602655 NBEAP1P0C6P0 100 aa12.88□□□□□ -0.35
PPFIA3-206ENST00000602655 PPOXP50336 477 aa12.88□□□□□ -0.35
PPFIA3-206ENST00000602655 PLP2Q04941 152 aa12.88□□□□□ -0.35
PPFIA3-206ENST00000602655 ACSM6Q6P461 480 aa12.88□□□□□ -0.35
PPFIA3-206ENST00000602655 ZNF488Q96MN9 340 aa12.88□□□□□ -0.35
PPFIA3-206ENST00000602655 CLEC7AQ9BXN2 247 aa12.88□□□□□ -0.35
PPFIA3-206ENST00000602655 NPBWR2P48146 333 aa12.88□□□□□ -0.35
PPFIA3-206ENST00000602655 APOBEC3DQ96AK3 386 aaPredicted RBP12.88□□□□□ -0.35
PPFIA3-206ENST00000602655 ANKHD1Q8IWZ3 2542 aaKnown RBP12.88□□□□□ -0.35
PPFIA3-206ENST00000602655 IGHV2-26A0A0B4J1V2 119 aa12.87□□□□□ -0.35
PPFIA3-206ENST00000602655 TRAV17A0A0B4J275 112 aa12.87□□□□□ -0.35
PPFIA3-206ENST00000602655 FBLL1A6NHQ2 334 aaKnown RBP12.87□□□□□ -0.35
PPFIA3-206ENST00000602655 NPPCP23582 126 aa12.87□□□□□ -0.35
PPFIA3-206ENST00000602655 UQCRFS1P47985 274 aa12.87□□□□□ -0.35
PPFIA3-206ENST00000602655 SP5Q6BEB4 398 aaPredicted RBP12.87□□□□□ -0.35
PPFIA3-206ENST00000602655 MDS2Q8NDY4 140 aa12.87□□□□□ -0.35
PPFIA3-206ENST00000602655 PSMG3Q9BT73 122 aaPredicted RBP12.87□□□□□ -0.35
PPFIA3-206ENST00000602655 PNRC2Q9NPJ4 139 aaKnown RBP12.87□□□□□ -0.35
PPFIA3-206ENST00000602655 DECR2Q9NUI1 292 aa12.87□□□□□ -0.35
PPFIA3-206ENST00000602655 KIAA1549Q9HCM3 1950 aa12.87□□□□□ -0.35
PPFIA3-206ENST00000602655 SNAI2O43623 268 aa12.87□□□□□ -0.35
PPFIA3-206ENST00000602655 IGLL1P15814 213 aa12.87□□□□□ -0.35
PPFIA3-206ENST00000602655 GNB1P62873 340 aa12.87□□□□□ -0.35
PPFIA3-206ENST00000602655 MORN2Q502X0 79 aa12.87□□□□□ -0.35
PPFIA3-206ENST00000602655 PRR30Q53SZ7 412 aaPredicted RBP12.87□□□□□ -0.35
PPFIA3-206ENST00000602655 CENPVQ7Z7K6 275 aaPredicted RBP12.87□□□□□ -0.35
PPFIA3-206ENST00000602655 OR2H1Q9GZK4 316 aa12.87□□□□□ -0.35
PPFIA3-206ENST00000602655 A0A1W2PS18 150 aa12.87□□□□□ -0.35
PPFIA3-206ENST00000602655 ZNF324O75467 553 aaPredicted RBP12.87□□□□□ -0.35
PPFIA3-206ENST00000602655 PSG2P11465 335 aa12.87□□□□□ -0.35
PPFIA3-206ENST00000602655 TMEM56Q96MV1 263 aa12.87□□□□□ -0.35
PPFIA3-206ENST00000602655 C11orf1Q9H5F2 150 aa12.87□□□□□ -0.35
PPFIA3-206ENST00000602655 KCNS2Q9ULS6 477 aa12.87□□□□□ -0.35
PPFIA3-206ENST00000602655 TMEM56-RWDD3S4R434 201 aa12.87□□□□□ -0.35
PPFIA3-206ENST00000602655 TACC2O95359 2948 aa12.87□□□□□ -0.35
PPFIA3-206ENST00000602655 WNK2Q9Y3S1 2297 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms