RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 FCGR2CP31995 323 aa9.87□□□□□ -0.83
RPS28-204ENST00000602140 KLK9Q2XQG4 91 aa9.87□□□□□ -0.83
RPS28-204ENST00000602140 TIMM50Q3ZCQ8 353 aa9.87□□□□□ -0.83
RPS28-204ENST00000602140 OR4A47Q6IF82 309 aa9.87□□□□□ -0.83
RPS28-204ENST00000602140 SPAG16Q8N0X2 631 aa9.87□□□□□ -0.83
RPS28-204ENST00000602140 GVQW1Q8N7I0 195 aa9.87□□□□□ -0.83
RPS28-204ENST00000602140 UXS1Q8NBZ7 420 aa9.87□□□□□ -0.83
RPS28-204ENST00000602140 OR52B4Q8NGK2 314 aa9.87□□□□□ -0.83
RPS28-204ENST00000602140 OR13F1Q8NGS4 319 aa9.87□□□□□ -0.83
RPS28-204ENST00000602140 HRASLSQ9HDD0 168 aa9.87□□□□□ -0.83
RPS28-204ENST00000602140 BET1LQ9NYM9 111 aa9.87□□□□□ -0.83
RPS28-204ENST00000602140 KLK9Q9UKQ9 250 aa9.87□□□□□ -0.83
RPS28-204ENST00000602140 IGLV11-55A0A075B6I3 123 aa9.86□□□□□ -0.83
RPS28-204ENST00000602140 TRAV18A0A075B6X5 111 aa9.86□□□□□ -0.83
RPS28-204ENST00000602140 TRBV7-1A0A0A6YYK4 115 aa9.86□□□□□ -0.83
RPS28-204ENST00000602140 A8MWP6 167 aa9.86□□□□□ -0.83
RPS28-204ENST00000602140 SULT1C2O00338 296 aa9.86□□□□□ -0.83
RPS28-204ENST00000602140 SCAF4O95104 1147 aaKnown RBP9.86□□□□□ -0.83
RPS28-204ENST00000602140 PPYP01298 95 aa9.86□□□□□ -0.83
RPS28-204ENST00000602140 CLEC3BP05452 202 aa9.86□□□□□ -0.83
RPS28-204ENST00000602140 SDC2P34741 201 aa9.86□□□□□ -0.83
RPS28-204ENST00000602140 MXD1Q05195 221 aa9.86□□□□□ -0.83
RPS28-204ENST00000602140 TM4SF20Q53R12 229 aa9.86□□□□□ -0.83
RPS28-204ENST00000602140 BTNL8Q6UX41 500 aa9.86□□□□□ -0.83
RPS28-204ENST00000602140 OR5H6Q8NGV6 325 aa9.86□□□□□ -0.83
RPS28-204ENST00000602140 OR4A5Q8NH83 315 aa9.86□□□□□ -0.83
RPS28-204ENST00000602140 CXorf58Q96LI9 332 aa9.86□□□□□ -0.83
RPS28-204ENST00000602140 AIFM2Q9BRQ8 373 aa9.86□□□□□ -0.83
RPS28-204ENST00000602140 TRAV3A0A0B4J244 114 aa9.85□□□□□ -0.83
RPS28-204ENST00000602140 RBFOX2O43251 390 aaKnown RBP eCLIP9.85□□□□□ -0.83
RPS28-204ENST00000602140 FCER2P06734 321 aa9.85□□□□□ -0.83
RPS28-204ENST00000602140 CLEC2LP0C7M8 214 aa9.85□□□□□ -0.83
RPS28-204ENST00000602140 GPR183P32249 361 aa9.85□□□□□ -0.83
RPS28-204ENST00000602140 FXYD4P59646 89 aa9.85□□□□□ -0.83
RPS28-204ENST00000602140 OR2B8PP59922 312 aa9.85□□□□□ -0.83
RPS28-204ENST00000602140 MSMO1Q15800 293 aa9.85□□□□□ -0.83
RPS28-204ENST00000602140 ZNF773Q6PK81 442 aa9.85□□□□□ -0.83
RPS28-204ENST00000602140 UNQ9165/PRO28630Q6UXU0 137 aa9.85□□□□□ -0.83
RPS28-204ENST00000602140 HOGA1Q86XE5 327 aa9.85□□□□□ -0.83
RPS28-204ENST00000602140 ZBTB34Q8NCN2 500 aa9.85□□□□□ -0.83
RPS28-204ENST00000602140 FCGR1BQ92637 280 aa9.85□□□□□ -0.83
RPS28-204ENST00000602140 SLC25A38Q96DW6 304 aa9.85□□□□□ -0.83
RPS28-204ENST00000602140 GGTLC1Q9BX51 225 aa9.85□□□□□ -0.83
RPS28-204ENST00000602140 SLC5A7Q9GZV3 580 aa9.85□□□□□ -0.83
RPS28-204ENST00000602140 RNF167Q9H6Y7 350 aa9.85□□□□□ -0.83
RPS28-204ENST00000602140 LOC102724200A0A096LPH7 203 aaPredicted RBP9.84□□□□□ -0.83
RPS28-204ENST00000602140 IGHV3-35A0A0C4DH35 117 aa9.84□□□□□ -0.83
RPS28-204ENST00000602140 IGLC7A0M8Q6 106 aa9.84□□□□□ -0.83
RPS28-204ENST00000602140 UPK2O00526 184 aa9.84□□□□□ -0.83
RPS28-204ENST00000602140 HPRT1P00492 218 aa9.84□□□□□ -0.83
RPS28-204ENST00000602140 SCAND1P57086 179 aa9.84□□□□□ -0.83
RPS28-204ENST00000602140 TAS2R31P59538 309 aa9.84□□□□□ -0.83
RPS28-204ENST00000602140 CATR1Q13166 79 aa9.84□□□□□ -0.83
RPS28-204ENST00000602140 PLECQ15149 4684 aaKnown RBP9.84□□□□□ -0.83
RPS28-204ENST00000602140 ANKRD55Q3KP44 614 aa9.84□□□□□ -0.83
RPS28-204ENST00000602140 ZNF585BQ52M93 769 aa9.84□□□□□ -0.83
RPS28-204ENST00000602140 IDNKQ5T6J7 187 aa9.84□□□□□ -0.83
RPS28-204ENST00000602140 ZNF502Q8TBZ5 544 aa9.84□□□□□ -0.83
RPS28-204ENST00000602140 OVOL2Q9BRP0 275 aa9.84□□□□□ -0.83
RPS28-204ENST00000602140 COMMD5Q9GZQ3 224 aa9.84□□□□□ -0.83
RPS28-204ENST00000602140 ETV7Q9Y603 341 aa9.84□□□□□ -0.83
RPS28-204ENST00000602140 C8orf88P0DMB2 117 aa9.83□□□□□ -0.84
RPS28-204ENST00000602140 NQO2P16083 231 aa9.83□□□□□ -0.84
RPS28-204ENST00000602140 POU2AF1Q16633 256 aa9.83□□□□□ -0.84
RPS28-204ENST00000602140 PLET1Q6UQ28 207 aa9.83□□□□□ -0.84
RPS28-204ENST00000602140 ZNF818PQ6ZRF7 136 aa9.83□□□□□ -0.84
RPS28-204ENST00000602140 RBPMS2Q6ZRY4 209 aaKnown RBP9.83□□□□□ -0.84
RPS28-204ENST00000602140 TMEM17Q86X19 198 aa9.83□□□□□ -0.84
RPS28-204ENST00000602140 DMBX1Q8NFW5 382 aa9.83□□□□□ -0.84
RPS28-204ENST00000602140 OR10W1Q8NGF6 305 aa9.83□□□□□ -0.84
RPS28-204ENST00000602140 OR51H1Q8NH63 302 aa9.83□□□□□ -0.84
RPS28-204ENST00000602140 MARC2Q969Z3 335 aa9.83□□□□□ -0.84
RPS28-204ENST00000602140 AUNIPQ9H7T9 357 aa9.83□□□□□ -0.84
RPS28-204ENST00000602140 TMEM140Q9NV12 185 aa9.83□□□□□ -0.84
RPS28-204ENST00000602140 THYN1Q9P016 225 aa9.83□□□□□ -0.84
RPS28-204ENST00000602140 HYDINQ4G0P3 5121 aa9.82□□□□□ -0.84
RPS28-204ENST00000602140 BIRC6Q9NR09 4857 aa9.82□□□□□ -0.84
RPS28-204ENST00000602140 A0A0A6YYH2 397 aa9.82□□□□□ -0.84
RPS28-204ENST00000602140 TRAV25A0A0B4J276 109 aa9.82□□□□□ -0.84
RPS28-204ENST00000602140 LOC100506127A0A0U1RQW1 187 aa9.82□□□□□ -0.84
RPS28-204ENST00000602140 MEIS3P1A6NDR6 274 aa9.82□□□□□ -0.84
RPS28-204ENST00000602140 A6NJ64 397 aa9.82□□□□□ -0.84
RPS28-204ENST00000602140 S1PR2O95136 353 aa9.82□□□□□ -0.84
RPS28-204ENST00000602140 RPA2P15927 270 aa9.82□□□□□ -0.84
RPS28-204ENST00000602140 PTBP1P26599 531 aaKnown RBP eCLIP9.82□□□□□ -0.84
RPS28-204ENST00000602140 ELLP55199 621 aaPredicted RBP9.82□□□□□ -0.84
RPS28-204ENST00000602140 AADACL3Q5VUY0 350 aa9.82□□□□□ -0.84
RPS28-204ENST00000602140 OR5AP2Q8NGF4 316 aa9.82□□□□□ -0.84
RPS28-204ENST00000602140 OR1L6Q8NGR2 347 aa9.82□□□□□ -0.84
RPS28-204ENST00000602140 GIMAP1Q8WWP7 306 aa9.82□□□□□ -0.84
RPS28-204ENST00000602140 SRSF8Q9BRL6 282 aaKnown RBP9.82□□□□□ -0.84
RPS28-204ENST00000602140 QTRT1Q9BXR0 403 aaKnown RBP9.82□□□□□ -0.84
RPS28-204ENST00000602140 PLEKHA2Q9HB19 425 aa9.82□□□□□ -0.84
RPS28-204ENST00000602140 DIABLOQ9NR28 239 aa9.82□□□□□ -0.84
RPS28-204ENST00000602140 MRPL27Q9P0M9 148 aaKnown RBP9.82□□□□□ -0.84
RPS28-204ENST00000602140 UFC1Q9Y3C8 167 aa9.82□□□□□ -0.84
RPS28-204ENST00000602140 TGOLN2O43493 480 aa9.81□□□□□ -0.84
RPS28-204ENST00000602140 OR2C3Q8N628 320 aa9.81□□□□□ -0.84
RPS28-204ENST00000602140 CD300LFQ8TDQ1 290 aa9.81□□□□□ -0.84
RPS28-204ENST00000602140 VN1R17PQ8TDU5 208 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms