RNA–Protein interactions for RNA: ENST00000601849.1

VRK3-224, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 653 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-224ENST00000601849 FANCD2OSQ96PS1 177 aa7.17□□□□□ -1.26
VRK3-224ENST00000601849 SPAG8Q99932 426 aaPredicted RBP7.17□□□□□ -1.26
VRK3-224ENST00000601849 SRSF8Q9BRL6 282 aaKnown RBP7.17□□□□□ -1.26
VRK3-224ENST00000601849 C5orf66Q9H5L9 145 aa7.17□□□□□ -1.26
VRK3-224ENST00000601849 BET1LQ9NYM9 111 aa7.17□□□□□ -1.26
VRK3-224ENST00000601849 TAS2R8Q9NYW2 309 aa7.17□□□□□ -1.26
VRK3-224ENST00000601849 ANXA10Q9UJ72 324 aa7.17□□□□□ -1.26
VRK3-224ENST00000601849 KIR2DL5BA0A0G2JN68 375 aa7.16□□□□□ -1.26
VRK3-224ENST00000601849 KIR2DL5BA0A0G2JPC4 375 aa7.16□□□□□ -1.26
VRK3-224ENST00000601849 A0A0J9YWU9 116 aa7.16□□□□□ -1.26
VRK3-224ENST00000601849 OR4C46A6NHA9 309 aa7.16□□□□□ -1.26
VRK3-224ENST00000601849 AREGP15514 252 aa7.16□□□□□ -1.26
VRK3-224ENST00000601849 ATF4P18848 351 aaPredicted RBP7.16□□□□□ -1.26
VRK3-224ENST00000601849 PTBP1P26599 531 aaKnown RBP eCLIP7.16□□□□□ -1.26
VRK3-224ENST00000601849 TAS2R31P59538 309 aa7.16□□□□□ -1.26
VRK3-224ENST00000601849 MSMO1Q15800 293 aa7.16□□□□□ -1.26
VRK3-224ENST00000601849 THOC7Q6I9Y2 204 aaKnown RBP7.16□□□□□ -1.26
VRK3-224ENST00000601849 ZNF367Q7RTV3 350 aa7.16□□□□□ -1.26
VRK3-224ENST00000601849 HSD17B13Q7Z5P4 300 aaPredicted RBP7.16□□□□□ -1.26
VRK3-224ENST00000601849 LYG2Q86SG7 212 aa7.16□□□□□ -1.26
VRK3-224ENST00000601849 SPAG16Q8N0X2 631 aa7.16□□□□□ -1.26
VRK3-224ENST00000601849 KIR2DL5AQ8N109 375 aa7.16□□□□□ -1.26
VRK3-224ENST00000601849 KIR2DL5BQ8NHK3 375 aa7.16□□□□□ -1.26
VRK3-224ENST00000601849 CD300LFQ8TDQ1 290 aa7.16□□□□□ -1.26
VRK3-224ENST00000601849 VCX3BQ9H321 246 aa7.16□□□□□ -1.26
VRK3-224ENST00000601849 S4R3C0 116 aa7.16□□□□□ -1.26
VRK3-224ENST00000601849 IGLV11-55A0A075B6I3 123 aa7.15□□□□□ -1.26
VRK3-224ENST00000601849 IGKV1D-8A0A087WSZ0 117 aa7.15□□□□□ -1.26
VRK3-224ENST00000601849 TRDV1A0A1B0GX56 115 aa7.15□□□□□ -1.26
VRK3-224ENST00000601849 E7EUB6 86 aa7.15□□□□□ -1.26
VRK3-224ENST00000601849 TSPAN4O14817 238 aa7.15□□□□□ -1.26
VRK3-224ENST00000601849 HPRT1P00492 218 aa7.15□□□□□ -1.26
VRK3-224ENST00000601849 REG1AP05451 166 aa7.15□□□□□ -1.26
VRK3-224ENST00000601849 FGF2P09038 288 aa7.15□□□□□ -1.26
VRK3-224ENST00000601849 C8orf88P0DMB2 117 aa7.15□□□□□ -1.26
VRK3-224ENST00000601849 NQO2P16083 231 aa7.15□□□□□ -1.26
VRK3-224ENST00000601849 EDN2P20800 178 aa7.15□□□□□ -1.26
VRK3-224ENST00000601849 GPR183P32249 361 aa7.15□□□□□ -1.26
VRK3-224ENST00000601849 AQP4P55087 323 aa7.15□□□□□ -1.26
VRK3-224ENST00000601849 OR10A3P58181 314 aa7.15□□□□□ -1.26
VRK3-224ENST00000601849 KLK9Q2XQG4 91 aa7.15□□□□□ -1.26
VRK3-224ENST00000601849 SPSB3Q6PJ21 355 aa7.15□□□□□ -1.26
VRK3-224ENST00000601849 TPRA1Q86W33 373 aa7.15□□□□□ -1.26
VRK3-224ENST00000601849 DMBX1Q8NFW5 382 aa7.15□□□□□ -1.26
VRK3-224ENST00000601849 VN1R17PQ8TDU5 208 aa7.15□□□□□ -1.26
VRK3-224ENST00000601849 SECTM1Q8WVN6 248 aa7.15□□□□□ -1.26
VRK3-224ENST00000601849 GALNT14Q96FL9 552 aa7.15□□□□□ -1.26
VRK3-224ENST00000601849 CCDC140Q96MF4 163 aa7.15□□□□□ -1.26
VRK3-224ENST00000601849 DAZ1Q9NQZ3 744 aaKnown RBP7.15□□□□□ -1.26
VRK3-224ENST00000601849 KLK9Q9UKQ9 250 aa7.15□□□□□ -1.26
VRK3-224ENST00000601849 SELENOKQ9Y6D0 94 aa7.15□□□□□ -1.26
VRK3-224ENST00000601849 NOTOA8MTQ0 251 aa7.14□□□□□ -1.27
VRK3-224ENST00000601849 RBFOX2O43251 390 aaKnown RBP eCLIP7.14□□□□□ -1.27
VRK3-224ENST00000601849 TGOLN2O43493 480 aa7.14□□□□□ -1.27
VRK3-224ENST00000601849 IGLV2-14P01704 120 aa7.14□□□□□ -1.27
VRK3-224ENST00000601849 IFNA4P05014 189 aa7.14□□□□□ -1.27
VRK3-224ENST00000601849 FCGR2CP31995 323 aa7.14□□□□□ -1.27
VRK3-224ENST00000601849 ERVK-16P61578 105 aa7.14□□□□□ -1.27
VRK3-224ENST00000601849 TBCEQ15813 527 aaPredicted RBP7.14□□□□□ -1.27
VRK3-224ENST00000601849 DEFB135Q30KP9 77 aa7.14□□□□□ -1.27
VRK3-224ENST00000601849 C22orf42Q6IC83 251 aa7.14□□□□□ -1.27
VRK3-224ENST00000601849 SLC25A24Q6NUK1 477 aa7.14□□□□□ -1.27
VRK3-224ENST00000601849 NUDCD2Q8WVJ2 157 aa7.14□□□□□ -1.27
VRK3-224ENST00000601849 RNF183Q96D59 192 aa7.14□□□□□ -1.27
VRK3-224ENST00000601849 BSCL2Q96G97 398 aaPredicted RBP7.14□□□□□ -1.27
VRK3-224ENST00000601849 CMTM3Q96MX0 182 aa7.14□□□□□ -1.27
VRK3-224ENST00000601849 ATP6V0BQ99437 205 aa7.14□□□□□ -1.27
VRK3-224ENST00000601849 MFFQ9GZY8 342 aa7.14□□□□□ -1.27
VRK3-224ENST00000601849 NDUFB11Q9NX14 153 aa7.14□□□□□ -1.27
VRK3-224ENST00000601849 ELF5Q9UKW6 265 aaPredicted RBP7.14□□□□□ -1.27
VRK3-224ENST00000601849 FRAS1Q86XX4 4008 aa7.14□□□□□ -1.27
VRK3-224ENST00000601849 IGKV1D-13A0A0B4J2D9 117 aa7.13□□□□□ -1.27
VRK3-224ENST00000601849 IGHV3-35A0A0C4DH35 117 aa7.13□□□□□ -1.27
VRK3-224ENST00000601849 TMEM235A6NFC5 223 aa7.13□□□□□ -1.27
VRK3-224ENST00000601849 MFSD2BA6NFX1 497 aa7.13□□□□□ -1.27
VRK3-224ENST00000601849 K7EMT4 169 aa7.13□□□□□ -1.27
VRK3-224ENST00000601849 NDUFA4O00483 81 aa7.13□□□□□ -1.27
VRK3-224ENST00000601849 TNFSF12O43508 249 aa7.13□□□□□ -1.27
VRK3-224ENST00000601849 TRAPPC2P0DI81 140 aa7.13□□□□□ -1.27
VRK3-224ENST00000601849 TRAPPC2BP0DI82 140 aa7.13□□□□□ -1.27
VRK3-224ENST00000601849 IGKV1-13P0DP09 117 aa7.13□□□□□ -1.27
VRK3-224ENST00000601849 HSPA13P48723 471 aa7.13□□□□□ -1.27
VRK3-224ENST00000601849 OR2B8PP59922 312 aa7.13□□□□□ -1.27
VRK3-224ENST00000601849 PAFAH1B2P68402 229 aa7.13□□□□□ -1.27
VRK3-224ENST00000601849 TIMM50Q3ZCQ8 353 aa7.13□□□□□ -1.27
VRK3-224ENST00000601849 UNQ9165/PRO28630Q6UXU0 137 aa7.13□□□□□ -1.27
VRK3-224ENST00000601849 IZUMO2Q6UXV1 221 aa7.13□□□□□ -1.27
VRK3-224ENST00000601849 C19orf35Q6ZS72 473 aa7.13□□□□□ -1.27
VRK3-224ENST00000601849 CENPSQ8N2Z9 138 aa7.13□□□□□ -1.27
VRK3-224ENST00000601849 BEST4Q8NFU0 473 aa7.13□□□□□ -1.27
VRK3-224ENST00000601849 TSPAN14Q8NG11 270 aa7.13□□□□□ -1.27
VRK3-224ENST00000601849 OR13F1Q8NGS4 319 aa7.13□□□□□ -1.27
VRK3-224ENST00000601849 ZNF502Q8TBZ5 544 aa7.13□□□□□ -1.27
VRK3-224ENST00000601849 C20orf24Q9BUV8 137 aa7.13□□□□□ -1.27
VRK3-224ENST00000601849 QTRT1Q9BXR0 403 aaKnown RBP7.13□□□□□ -1.27
VRK3-224ENST00000601849 ZNF436Q9C0F3 470 aaPredicted RBP7.13□□□□□ -1.27
VRK3-224ENST00000601849 SLC5A7Q9GZV3 580 aa7.13□□□□□ -1.27
VRK3-224ENST00000601849 CCL28Q9NRJ3 127 aa7.13□□□□□ -1.27
VRK3-224ENST00000601849 UBQLN2Q9UHD9 624 aa7.13□□□□□ -1.27
VRK3-224ENST00000601849 DAPK2Q9UIK4 370 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms