RNA–Protein interactions for RNA: ENST00000601685.1

CAPN12-211, Transcript of calpain 12, human

Gene CAPN12, Length 2,552 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAPN12-211	ENST00000601685	OR10J3	Q5JRS4	329 aa		13.74	□□□□□ -0.21
CAPN12-211	ENST00000601685	ABHD17B	Q5VST6	288 aa		13.74	□□□□□ -0.21
CAPN12-211	ENST00000601685	FBXW9	Q5XUX1	488 aa		13.74	□□□□□ -0.21
CAPN12-211	ENST00000601685	ABHD12	Q8N2K0	398 aa		13.74	□□□□□ -0.21
CAPN12-211	ENST00000601685	RFESD	Q8TAC1	157 aa		13.74	□□□□□ -0.21
CAPN12-211	ENST00000601685	PRR7	Q8TB68	274 aa		13.74	□□□□□ -0.21
CAPN12-211	ENST00000601685	SLC35E1	Q96K37	410 aa		13.74	□□□□□ -0.21
CAPN12-211	ENST00000601685	OPN3	Q9H1Y3	402 aa	Predicted RBP	13.74	□□□□□ -0.21
CAPN12-211	ENST00000601685	LNP1	A1A4G5	178 aa		13.74	□□□□□ -0.21
CAPN12-211	ENST00000601685	FOXH1	O75593	365 aa		13.74	□□□□□ -0.21
CAPN12-211	ENST00000601685	MT-ND6	P03923	174 aa		13.74	□□□□□ -0.21
CAPN12-211	ENST00000601685	CHRNB4	P30926	498 aa		13.74	□□□□□ -0.21
CAPN12-211	ENST00000601685	SUMO1	P63165	101 aa	Known RBP	13.74	□□□□□ -0.21
CAPN12-211	ENST00000601685	LPAL2	Q16609	132 aa		13.74	□□□□□ -0.21
CAPN12-211	ENST00000601685	WDR73	Q6P4I2	378 aa		13.74	□□□□□ -0.21
CAPN12-211	ENST00000601685	C11orf53	Q8IXP5	236 aa		13.74	□□□□□ -0.21
CAPN12-211	ENST00000601685	C11orf42	Q8N5U0	333 aa		13.74	□□□□□ -0.21
CAPN12-211	ENST00000601685	TMEM251	Q8N6I4	163 aa		13.74	□□□□□ -0.21
CAPN12-211	ENST00000601685	TPRX1	Q8N7U7	411 aa		13.74	□□□□□ -0.21
CAPN12-211	ENST00000601685		Q8TCH9	128 aa		13.74	□□□□□ -0.21
CAPN12-211	ENST00000601685	NAT8B	Q9UHF3	227 aa		13.74	□□□□□ -0.21
CAPN12-211	ENST00000601685	SP1	P08047	785 aa		13.73	□□□□□ -0.21
CAPN12-211	ENST00000601685	OR10J4	P0C629	311 aa		13.73	□□□□□ -0.21
CAPN12-211	ENST00000601685	CX3CL1	P78423	397 aa		13.73	□□□□□ -0.21
CAPN12-211	ENST00000601685	MMD	Q15546	238 aa		13.73	□□□□□ -0.21
CAPN12-211	ENST00000601685	ACP7	Q6ZNF0	438 aa		13.73	□□□□□ -0.21
CAPN12-211	ENST00000601685	CXorf67	Q86X51	503 aa	Predicted RBP	13.73	□□□□□ -0.21
CAPN12-211	ENST00000601685	UBALD2	Q8IYN6	164 aa		13.73	□□□□□ -0.21
CAPN12-211	ENST00000601685	ZNF253	O75346	499 aa		13.73	□□□□□ -0.21
CAPN12-211	ENST00000601685	GPR12	P47775	334 aa		13.73	□□□□□ -0.21
CAPN12-211	ENST00000601685	AMT	P48728	403 aa		13.73	□□□□□ -0.21
CAPN12-211	ENST00000601685	RPL19	P84098	196 aa	Known RBP	13.73	□□□□□ -0.21
CAPN12-211	ENST00000601685	STPG3	Q8N7X2	389 aa		13.73	□□□□□ -0.21
CAPN12-211	ENST00000601685	KCNS1	Q96KK3	526 aa		13.73	□□□□□ -0.21
CAPN12-211	ENST00000601685	CDX2	Q99626	313 aa	Predicted RBP	13.73	□□□□□ -0.21
CAPN12-211	ENST00000601685	DNAJC4	Q9NNZ3	241 aa		13.73	□□□□□ -0.21
CAPN12-211	ENST00000601685	UQCR10	Q9UDW1	63 aa		13.73	□□□□□ -0.21
CAPN12-211	ENST00000601685		A0A1W2PS18	150 aa		13.72	□□□□□ -0.21
CAPN12-211	ENST00000601685	LAMTOR5	O43504	91 aa		13.72	□□□□□ -0.21
CAPN12-211	ENST00000601685	RELB	Q01201	579 aa		13.72	□□□□□ -0.21
CAPN12-211	ENST00000601685	TMEM136	Q6ZRR5	245 aa		13.72	□□□□□ -0.21
CAPN12-211	ENST00000601685	LINC00696	Q6ZRV3	163 aa		13.72	□□□□□ -0.21
CAPN12-211	ENST00000601685	METRN	Q9UJH8	293 aa		13.72	□□□□□ -0.21
CAPN12-211	ENST00000601685	PTPRB	P23467	1997 aa		13.72	□□□□□ -0.21
CAPN12-211	ENST00000601685	ZDBF2	Q9HCK1	2354 aa		13.72	□□□□□ -0.21
CAPN12-211	ENST00000601685	C15orf65	H3BRN8	121 aa		13.72	□□□□□ -0.21
CAPN12-211	ENST00000601685	TNFSF15	O95150	251 aa		13.72	□□□□□ -0.21
CAPN12-211	ENST00000601685	ADH4	P08319	380 aa		13.72	□□□□□ -0.21
CAPN12-211	ENST00000601685	COL8A2	P25067	703 aa		13.72	□□□□□ -0.21
CAPN12-211	ENST00000601685	VKORC1L1	Q8N0U8	176 aa		13.72	□□□□□ -0.21
CAPN12-211	ENST00000601685	OR4P4	Q8NGL7	312 aa		13.72	□□□□□ -0.21
CAPN12-211	ENST00000601685	STARD4	Q96DR4	205 aa		13.72	□□□□□ -0.21
CAPN12-211	ENST00000601685	OBP2B	Q9NPH6	170 aa		13.72	□□□□□ -0.21
CAPN12-211	ENST00000601685	URB1	O60287	2271 aa	Known RBP	13.71	□□□□□ -0.21
CAPN12-211	ENST00000601685	TRAV3	A0A0B4J244	114 aa		13.71	□□□□□ -0.21
CAPN12-211	ENST00000601685	SPINT2	O43291	252 aa		13.71	□□□□□ -0.21
CAPN12-211	ENST00000601685	CGA	P01215	116 aa		13.71	□□□□□ -0.21
CAPN12-211	ENST00000601685	IGLC2	P0DOY2	106 aa		13.71	□□□□□ -0.21
CAPN12-211	ENST00000601685	IGLC3	P0DOY3	106 aa		13.71	□□□□□ -0.21
CAPN12-211	ENST00000601685	GNG4	P50150	75 aa		13.71	□□□□□ -0.21
CAPN12-211	ENST00000601685	COX19	Q49B96	90 aa		13.71	□□□□□ -0.21
CAPN12-211	ENST00000601685	CENPW	Q5EE01	88 aa		13.71	□□□□□ -0.21
CAPN12-211	ENST00000601685	TEPP	Q6URK8	271 aa		13.71	□□□□□ -0.21
CAPN12-211	ENST00000601685	TMEM265	A0A087WTH1	108 aa		13.71	□□□□□ -0.22
CAPN12-211	ENST00000601685	TCF21	O43680	179 aa		13.71	□□□□□ -0.22
CAPN12-211	ENST00000601685	HYPM	O75409	117 aa		13.71	□□□□□ -0.22
CAPN12-211	ENST00000601685	ACP1	P24666	158 aa		13.71	□□□□□ -0.22
CAPN12-211	ENST00000601685	ZNF83	P51522	516 aa		13.71	□□□□□ -0.22
CAPN12-211	ENST00000601685	ERVK-16	P61578	105 aa		13.71	□□□□□ -0.22
CAPN12-211	ENST00000601685	C21orf62-AS1	Q17RA5	79 aa		13.71	□□□□□ -0.22
CAPN12-211	ENST00000601685	RCHY1	Q96PM5	261 aa		13.71	□□□□□ -0.22
CAPN12-211	ENST00000601685	DCTN5	Q9BTE1	182 aa		13.71	□□□□□ -0.22
CAPN12-211	ENST00000601685	TCF19	Q9Y242	345 aa		13.71	□□□□□ -0.22
CAPN12-211	ENST00000601685	ARL2-SNX15	V9GYD0	113 aa		13.71	□□□□□ -0.22
CAPN12-211	ENST00000601685	MED13	Q9UHV7	2174 aa		13.7	□□□□□ -0.22
CAPN12-211	ENST00000601685	HELT	A6NFD8	242 aa		13.7	□□□□□ -0.22
CAPN12-211	ENST00000601685	SPINK4	O60575	86 aa		13.7	□□□□□ -0.22
CAPN12-211	ENST00000601685	REG1A	P05451	166 aa		13.7	□□□□□ -0.22
CAPN12-211	ENST00000601685	OR5G3	P0C626	314 aa		13.7	□□□□□ -0.22
CAPN12-211	ENST00000601685	PMCH	P20382	165 aa		13.7	□□□□□ -0.22
CAPN12-211	ENST00000601685	MPV17	P39210	176 aa		13.7	□□□□□ -0.22
CAPN12-211	ENST00000601685	LTC4S	Q16873	150 aa		13.7	□□□□□ -0.22
CAPN12-211	ENST00000601685	KIAA1644	Q3SXP7	199 aa		13.7	□□□□□ -0.22
CAPN12-211	ENST00000601685	STPG4	Q8N801	248 aa		13.7	□□□□□ -0.22
CAPN12-211	ENST00000601685	OSTC	Q9NRP0	149 aa		13.7	□□□□□ -0.22
CAPN12-211	ENST00000601685	COL27A1	Q8IZC6	1860 aa	Predicted RBP	13.7	□□□□□ -0.22
CAPN12-211	ENST00000601685	TRGV8	A0A0C4DH27	118 aa		13.7	□□□□□ -0.22
CAPN12-211	ENST00000601685	NDUFB8	O95169	186 aa		13.7	□□□□□ -0.22
CAPN12-211	ENST00000601685	PCP4	P48539	62 aa		13.7	□□□□□ -0.22
CAPN12-211	ENST00000601685	PPIAL4A	Q9Y536	164 aa		13.7	□□□□□ -0.22
CAPN12-211	ENST00000601685	KIR2DP1	A0A0G2JNF4	349 aa	Predicted RBP	13.69	□□□□□ -0.22
CAPN12-211	ENST00000601685	C9orf172	C9J069	976 aa		13.69	□□□□□ -0.22
CAPN12-211	ENST00000601685	ZNF324	O75467	553 aa	Predicted RBP	13.69	□□□□□ -0.22
CAPN12-211	ENST00000601685	PRRX1	P54821	245 aa		13.69	□□□□□ -0.22
CAPN12-211	ENST00000601685	TRAT1	Q6PIZ9	186 aa		13.69	□□□□□ -0.22
CAPN12-211	ENST00000601685	PQLC2	Q6ZP29	291 aa		13.69	□□□□□ -0.22
CAPN12-211	ENST00000601685	GCNT2	Q8N0V5	402 aa		13.69	□□□□□ -0.22
CAPN12-211	ENST00000601685	FAM234A	Q9H0X4	552 aa		13.69	□□□□□ -0.22
CAPN12-211	ENST00000601685	TMEM140	Q9NV12	185 aa		13.69	□□□□□ -0.22
CAPN12-211	ENST00000601685	FOXJ2	Q9P0K8	574 aa		13.69	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 47 ms