RNA–Protein interactions for RNA: ENST00000601341.5

VRK3-223, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene VRK3, Length 1,777 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-223ENST00000601341 ZNF251Q9BRH9 671 aa9.56□□□□□ -0.88
VRK3-223ENST00000601341 C20orf24Q9BUV8 137 aa9.56□□□□□ -0.88
VRK3-223ENST00000601341 SSBP3Q9BWW4 388 aaPredicted RBP9.56□□□□□ -0.88
VRK3-223ENST00000601341 IDI2-AS1Q9NZ38 188 aa9.56□□□□□ -0.88
VRK3-223ENST00000601341 RPUSD1Q9UJJ7 312 aaKnown RBP9.56□□□□□ -0.88
VRK3-223ENST00000601341 CENPEQ02224 2701 aa9.56□□□□□ -0.88
VRK3-223ENST00000601341 PMS2P5A8MQ11 134 aa9.55□□□□□ -0.88
VRK3-223ENST00000601341 RAMP3O60896 148 aa9.55□□□□□ -0.88
VRK3-223ENST00000601341 CCL3L1P16619 93 aa9.55□□□□□ -0.88
VRK3-223ENST00000601341 KIR2DS2P43631 304 aa9.55□□□□□ -0.88
VRK3-223ENST00000601341 RPL30P62888 115 aaKnown RBP9.55□□□□□ -0.88
VRK3-223ENST00000601341 RPP30P78346 268 aaKnown RBP9.55□□□□□ -0.88
VRK3-223ENST00000601341 FAM90A2PQ658T7 463 aa9.55□□□□□ -0.88
VRK3-223ENST00000601341 H2BFWTQ7Z2G1 175 aa9.55□□□□□ -0.88
VRK3-223ENST00000601341 OR52E5Q8NH55 327 aa9.55□□□□□ -0.88
VRK3-223ENST00000601341 C10orf105Q8TEF2 133 aa9.55□□□□□ -0.88
VRK3-223ENST00000601341 C2CD4CQ8TF44 421 aa9.55□□□□□ -0.88
VRK3-223ENST00000601341 TCTEX1D2Q8WW35 142 aa9.55□□□□□ -0.88
VRK3-223ENST00000601341 C5orf30Q96GV9 206 aa9.55□□□□□ -0.88
VRK3-223ENST00000601341 CTDSP1Q9GZU7 261 aa9.55□□□□□ -0.88
VRK3-223ENST00000601341 GFOD1Q9NXC2 390 aa9.55□□□□□ -0.88
VRK3-223ENST00000601341 GNG13Q9P2W3 67 aa9.55□□□□□ -0.88
VRK3-223ENST00000601341 PPIAL4CA0A0B4J2A2 164 aa9.55□□□□□ -0.88
VRK3-223ENST00000601341 A0A1B0GV50 99 aa9.55□□□□□ -0.88
VRK3-223ENST00000601341 A0A1W2PPE2 198 aa9.55□□□□□ -0.88
VRK3-223ENST00000601341 TMEM250H0YL14 139 aa9.55□□□□□ -0.88
VRK3-223ENST00000601341 S1PR2O95136 353 aa9.55□□□□□ -0.88
VRK3-223ENST00000601341 HPRT1P00492 218 aa9.55□□□□□ -0.88
VRK3-223ENST00000601341 KRASP01116 189 aa9.55□□□□□ -0.88
VRK3-223ENST00000601341 ARG1P05089 322 aa9.55□□□□□ -0.88
VRK3-223ENST00000601341 PPIAL4GP0DN37 164 aa9.55□□□□□ -0.88
VRK3-223ENST00000601341 MDKP21741 143 aaPredicted RBP9.55□□□□□ -0.88
VRK3-223ENST00000601341 G6PCP35575 357 aa9.55□□□□□ -0.88
VRK3-223ENST00000601341 RPL35P42766 123 aaKnown RBP9.55□□□□□ -0.88
VRK3-223ENST00000601341 RND2P52198 227 aa9.55□□□□□ -0.88
VRK3-223ENST00000601341 BRWD1-AS2P59051 145 aa9.55□□□□□ -0.88
VRK3-223ENST00000601341 SNRPEP62304 92 aaKnown RBP9.55□□□□□ -0.88
VRK3-223ENST00000601341 ZNF726P1Q15940 193 aa9.55□□□□□ -0.88
VRK3-223ENST00000601341 PRAMEF5Q5TYX0 476 aa9.55□□□□□ -0.88
VRK3-223ENST00000601341 FAM53AQ6NSI3 398 aaPredicted RBP9.55□□□□□ -0.88
VRK3-223ENST00000601341 ZFP82Q8N141 532 aa9.55□□□□□ -0.88
VRK3-223ENST00000601341 DTD1Q8TEA8 209 aa9.55□□□□□ -0.88
VRK3-223ENST00000601341 GGACTQ9BVM4 153 aa9.55□□□□□ -0.88
VRK3-223ENST00000601341 BEX4Q9NWD9 120 aaPredicted RBP9.55□□□□□ -0.88
VRK3-223ENST00000601341 MALRD1Q5VYJ5 2156 aa9.55□□□□□ -0.88
VRK3-223ENST00000601341 CELSR2Q9HCU4 2923 aa9.54□□□□□ -0.88
VRK3-223ENST00000601341 LOC105371242A0A075B767 164 aa9.54□□□□□ -0.88
VRK3-223ENST00000601341 CTXND1A0A1B0GTU2 59 aa9.54□□□□□ -0.88
VRK3-223ENST00000601341 MAP1LC3B2A6NCE7 125 aa9.54□□□□□ -0.88
VRK3-223ENST00000601341 C17orf98A8MV24 154 aa9.54□□□□□ -0.88
VRK3-223ENST00000601341 AP4M1O00189 453 aa9.54□□□□□ -0.88
VRK3-223ENST00000601341 MPDU1O75352 247 aa9.54□□□□□ -0.88
VRK3-223ENST00000601341 LIPFP07098 398 aa9.54□□□□□ -0.88
VRK3-223ENST00000601341 RAB7AP51149 207 aa9.54□□□□□ -0.88
VRK3-223ENST00000601341 DLX6P56179 175 aa9.54□□□□□ -0.88
VRK3-223ENST00000601341 LMO4P61968 165 aa9.54□□□□□ -0.88
VRK3-223ENST00000601341 ELOBQ15370 118 aa9.54□□□□□ -0.88
VRK3-223ENST00000601341 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.54□□□□□ -0.88
VRK3-223ENST00000601341 LY6G5BQ8NDX9 201 aa9.54□□□□□ -0.88
VRK3-223ENST00000601341 MAP1LC3BQ9GZQ8 125 aa9.54□□□□□ -0.88
VRK3-223ENST00000601341 MANBALQ9NQG1 85 aa9.54□□□□□ -0.88
VRK3-223ENST00000601341 SLC39A9Q9NUM3 307 aa9.54□□□□□ -0.88
VRK3-223ENST00000601341 FBN2P35556 2912 aa9.54□□□□□ -0.88
VRK3-223ENST00000601341 UBE2L5PA0A1B0GUS4 154 aa9.53□□□□□ -0.88
VRK3-223ENST00000601341 hCG_1809904A0A1W2PP81 198 aa9.53□□□□□ -0.88
VRK3-223ENST00000601341 A0A1W2PR64 198 aa9.53□□□□□ -0.88
VRK3-223ENST00000601341 A0A1W2PRV1 198 aa9.53□□□□□ -0.88
VRK3-223ENST00000601341 MARCH11A6NNE9 402 aa9.53□□□□□ -0.88
VRK3-223ENST00000601341 VWC2LB2RUY7 222 aa9.53□□□□□ -0.88
VRK3-223ENST00000601341 C22orf46C9J442 243 aa9.53□□□□□ -0.88
VRK3-223ENST00000601341 C17orf112F2Z3M2 114 aa9.53□□□□□ -0.88
VRK3-223ENST00000601341 MMP23AO75900 390 aa9.53□□□□□ -0.88
VRK3-223ENST00000601341 RBP4P02753 201 aa9.53□□□□□ -0.88
VRK3-223ENST00000601341 S100A9P06702 114 aaKnown RBP9.53□□□□□ -0.88
VRK3-223ENST00000601341 Q3ZCU0 254 aa9.53□□□□□ -0.88
VRK3-223ENST00000601341 HIST2H2BCQ6DN03 193 aa9.53□□□□□ -0.88
VRK3-223ENST00000601341 RPP25LQ8N5L8 163 aaKnown RBP9.53□□□□□ -0.88
VRK3-223ENST00000601341 PSG11Q9UQ72 335 aa9.53□□□□□ -0.88
VRK3-223ENST00000601341 GCN1Q92616 2671 aaKnown RBP9.53□□□□□ -0.88
VRK3-223ENST00000601341 ST8SIA5O15466 376 aa9.52□□□□□ -0.88
VRK3-223ENST00000601341 EIF3GO75821 320 aaKnown RBP eCLIP9.52□□□□□ -0.88
VRK3-223ENST00000601341 DUTP33316 252 aaKnown RBP9.52□□□□□ -0.88
VRK3-223ENST00000601341 SPCS3P61009 180 aa9.52□□□□□ -0.88
VRK3-223ENST00000601341 RAB11AP62491 216 aa9.52□□□□□ -0.88
VRK3-223ENST00000601341 ZNF816Q0VGE8 651 aaPredicted RBP9.52□□□□□ -0.88
VRK3-223ENST00000601341 DEFB113Q30KQ7 82 aa9.52□□□□□ -0.88
VRK3-223ENST00000601341 LRRC75A-AS1Q8N1F1 130 aa9.52□□□□□ -0.88
VRK3-223ENST00000601341 ZNF709Q8N972 641 aa9.52□□□□□ -0.88
VRK3-223ENST00000601341 SDF2L1Q9HCN8 221 aa9.52□□□□□ -0.88
VRK3-223ENST00000601341 ZFP92A6NM28 416 aa9.52□□□□□ -0.89
VRK3-223ENST00000601341 LINC00473A8K010 186 aa9.52□□□□□ -0.89
VRK3-223ENST00000601341 CLDN34H7C241 214 aa9.52□□□□□ -0.89
VRK3-223ENST00000601341 IGHV3-7P01780 117 aa9.52□□□□□ -0.89
VRK3-223ENST00000601341 IGHV1-8P0DP01 117 aa9.52□□□□□ -0.89
VRK3-223ENST00000601341 GPR12P47775 334 aa9.52□□□□□ -0.89
VRK3-223ENST00000601341 ZNF134P52741 427 aa9.52□□□□□ -0.89
VRK3-223ENST00000601341 ERVFRD-1P60508 538 aa9.52□□□□□ -0.89
VRK3-223ENST00000601341 MEF2BQ02080 365 aaPredicted RBP9.52□□□□□ -0.89
VRK3-223ENST00000601341 CT45A1Q5HYN5 189 aa9.52□□□□□ -0.89
VRK3-223ENST00000601341 OR8G2PQ6IF36 304 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms