RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 HIST1H1BP16401 226 aaKnown RBP13.45□□□□□ -0.26
CHMP2A-208ENST00000601220 OR2B8PP59922 312 aa13.45□□□□□ -0.26
CHMP2A-208ENST00000601220 TIMM50Q3ZCQ8 353 aa13.45□□□□□ -0.26
CHMP2A-208ENST00000601220 FAM106AQ4KMX7 169 aa13.45□□□□□ -0.26
CHMP2A-208ENST00000601220 TM4SF20Q53R12 229 aa13.45□□□□□ -0.26
CHMP2A-208ENST00000601220 HOGA1Q86XE5 327 aa13.45□□□□□ -0.26
CHMP2A-208ENST00000601220 GVQW1Q8N7I0 195 aa13.45□□□□□ -0.26
CHMP2A-208ENST00000601220 OR4A5Q8NH83 315 aa13.45□□□□□ -0.26
CHMP2A-208ENST00000601220 SLC25A38Q96DW6 304 aa13.45□□□□□ -0.26
CHMP2A-208ENST00000601220 OVOL2Q9BRP0 275 aa13.45□□□□□ -0.26
CHMP2A-208ENST00000601220 RHBDL2Q9NX52 303 aa13.45□□□□□ -0.26
CHMP2A-208ENST00000601220 RAB26Q9ULW5 256 aa13.45□□□□□ -0.26
CHMP2A-208ENST00000601220 RRP15Q9Y3B9 282 aaKnown RBP13.45□□□□□ -0.26
CHMP2A-208ENST00000601220 IGLC7A0M8Q6 106 aa13.44□□□□□ -0.26
CHMP2A-208ENST00000601220 ZNF320A2RRD8 509 aa13.44□□□□□ -0.26
CHMP2A-208ENST00000601220 RBFOX2O43251 390 aaKnown RBP eCLIP13.44□□□□□ -0.26
CHMP2A-208ENST00000601220 TNFSF12O43508 249 aa13.44□□□□□ -0.26
CHMP2A-208ENST00000601220 CLEC2LP0C7M8 214 aa13.44□□□□□ -0.26
CHMP2A-208ENST00000601220 FCGR2CP31995 323 aa13.44□□□□□ -0.26
CHMP2A-208ENST00000601220 POU2AF1Q16633 256 aa13.44□□□□□ -0.26
CHMP2A-208ENST00000601220 SLC16A13Q7RTY0 426 aa13.44□□□□□ -0.26
CHMP2A-208ENST00000601220 BEST4Q8NFU0 473 aa13.44□□□□□ -0.26
CHMP2A-208ENST00000601220 OR5H6Q8NGV6 325 aa13.44□□□□□ -0.26
CHMP2A-208ENST00000601220 TRBV7-1A0A0A6YYK4 115 aa13.43□□□□□ -0.26
CHMP2A-208ENST00000601220 DHFRP00374 187 aa13.43□□□□□ -0.26
CHMP2A-208ENST00000601220 PSMB9P28065 219 aa13.43□□□□□ -0.26
CHMP2A-208ENST00000601220 SDC2P34741 201 aa13.43□□□□□ -0.26
CHMP2A-208ENST00000601220 SPAG16Q8N0X2 631 aa13.43□□□□□ -0.26
CHMP2A-208ENST00000601220 ZBTB34Q8NCN2 500 aa13.43□□□□□ -0.26
CHMP2A-208ENST00000601220 OR13F1Q8NGS4 319 aa13.43□□□□□ -0.26
CHMP2A-208ENST00000601220 ZNF502Q8TBZ5 544 aa13.43□□□□□ -0.26
CHMP2A-208ENST00000601220 SECTM1Q8WVN6 248 aa13.43□□□□□ -0.26
CHMP2A-208ENST00000601220 RNF167Q9H6Y7 350 aa13.43□□□□□ -0.26
CHMP2A-208ENST00000601220 TRAV18A0A075B6X5 111 aa13.42□□□□□ -0.26
CHMP2A-208ENST00000601220 UPK2O00526 184 aa13.42□□□□□ -0.26
CHMP2A-208ENST00000601220 SCAF4O95104 1147 aaKnown RBP13.42□□□□□ -0.26
CHMP2A-208ENST00000601220 PPYP01298 95 aa13.42□□□□□ -0.26
CHMP2A-208ENST00000601220 TAS2R31P59538 309 aa13.42□□□□□ -0.26
CHMP2A-208ENST00000601220 BTNL8Q6UX41 500 aa13.42□□□□□ -0.26
CHMP2A-208ENST00000601220 OR52B4Q8NGK2 314 aa13.42□□□□□ -0.26
CHMP2A-208ENST00000601220 CXorf58Q96LI9 332 aa13.42□□□□□ -0.26
CHMP2A-208ENST00000601220 GGTLC1Q9BX51 225 aa13.42□□□□□ -0.26
CHMP2A-208ENST00000601220 ZNF436Q9C0F3 470 aaPredicted RBP13.42□□□□□ -0.26
CHMP2A-208ENST00000601220 SSR3Q9UNL2 185 aa13.42□□□□□ -0.26
CHMP2A-208ENST00000601220 TRAV25A0A0B4J276 109 aa13.41□□□□□ -0.26
CHMP2A-208ENST00000601220 SULT1C2O00338 296 aa13.41□□□□□ -0.26
CHMP2A-208ENST00000601220 HPRT1P00492 218 aa13.41□□□□□ -0.26
CHMP2A-208ENST00000601220 DEFA4P12838 97 aa13.41□□□□□ -0.26
CHMP2A-208ENST00000601220 PTBP1P26599 531 aaKnown RBP eCLIP13.41□□□□□ -0.26
CHMP2A-208ENST00000601220 SCAND1P57086 179 aa13.41□□□□□ -0.26
CHMP2A-208ENST00000601220 ARPC4P59998 168 aa13.41□□□□□ -0.26
CHMP2A-208ENST00000601220 SRSF8Q9BRL6 282 aaKnown RBP13.41□□□□□ -0.26
CHMP2A-208ENST00000601220 AIFM2Q9BRQ8 373 aa13.41□□□□□ -0.26
CHMP2A-208ENST00000601220 HRASLSQ9HDD0 168 aa13.41□□□□□ -0.26
CHMP2A-208ENST00000601220 LOC102724200A0A096LPH7 203 aaPredicted RBP13.4□□□□□ -0.26
CHMP2A-208ENST00000601220 FGF2P09038 288 aa13.4□□□□□ -0.26
CHMP2A-208ENST00000601220 GPR183P32249 361 aa13.4□□□□□ -0.26
CHMP2A-208ENST00000601220 ELLP55199 621 aaPredicted RBP13.4□□□□□ -0.26
CHMP2A-208ENST00000601220 ZNF585BQ52M93 769 aa13.4□□□□□ -0.26
CHMP2A-208ENST00000601220 ZNF818PQ6ZRF7 136 aa13.4□□□□□ -0.26
CHMP2A-208ENST00000601220 GIMAP1Q8WWP7 306 aa13.4□□□□□ -0.26
CHMP2A-208ENST00000601220 FCGR1BQ92637 280 aa13.4□□□□□ -0.26
CHMP2A-208ENST00000601220 MARC2Q969Z3 335 aa13.4□□□□□ -0.26
CHMP2A-208ENST00000601220 SLC5A7Q9GZV3 580 aa13.4□□□□□ -0.26
CHMP2A-208ENST00000601220 AUNIPQ9H7T9 357 aa13.4□□□□□ -0.26
CHMP2A-208ENST00000601220 MRPL27Q9P0M9 148 aaKnown RBP13.4□□□□□ -0.26
CHMP2A-208ENST00000601220 ETV7Q9Y603 341 aa13.4□□□□□ -0.26
CHMP2A-208ENST00000601220 A0A0A6YYH2 397 aa13.39□□□□□ -0.27
CHMP2A-208ENST00000601220 A6NJ64 397 aa13.39□□□□□ -0.27
CHMP2A-208ENST00000601220 NQO2P16083 231 aa13.39□□□□□ -0.27
CHMP2A-208ENST00000601220 MXD1Q05195 221 aa13.39□□□□□ -0.27
CHMP2A-208ENST00000601220 ANKRD55Q3KP44 614 aa13.39□□□□□ -0.27
CHMP2A-208ENST00000601220 OR10W1Q8NGF6 305 aa13.39□□□□□ -0.27
CHMP2A-208ENST00000601220 TMEM140Q9NV12 185 aa13.39□□□□□ -0.27
CHMP2A-208ENST00000601220 IGHV3-35A0A0C4DH35 117 aa13.38□□□□□ -0.27
CHMP2A-208ENST00000601220 FCER2P06734 321 aa13.38□□□□□ -0.27
CHMP2A-208ENST00000601220 GNRHRP30968 328 aa13.38□□□□□ -0.27
CHMP2A-208ENST00000601220 EWSR1Q01844 656 aaKnown RBP eCLIP13.38□□□□□ -0.27
CHMP2A-208ENST00000601220 WT1-ASQ06250 92 aa13.38□□□□□ -0.27
CHMP2A-208ENST00000601220 WFDC3Q8IUB2 231 aa13.38□□□□□ -0.27
CHMP2A-208ENST00000601220 VN1R17PQ8TDU5 208 aa13.38□□□□□ -0.27
CHMP2A-208ENST00000601220 C5orf66Q9H5L9 145 aa13.38□□□□□ -0.27
CHMP2A-208ENST00000601220 PLEKHA2Q9HB19 425 aa13.38□□□□□ -0.27
CHMP2A-208ENST00000601220 UFC1Q9Y3C8 167 aa13.38□□□□□ -0.27
CHMP2A-208ENST00000601220 TEX50A0A1B0GTY4 177 aa13.37□□□□□ -0.27
CHMP2A-208ENST00000601220 S1PR2O95136 353 aa13.37□□□□□ -0.27
CHMP2A-208ENST00000601220 MFAP2P55001 183 aa13.37□□□□□ -0.27
CHMP2A-208ENST00000601220 FXYD4P59646 89 aa13.37□□□□□ -0.27
CHMP2A-208ENST00000601220 CATR1Q13166 79 aa13.37□□□□□ -0.27
CHMP2A-208ENST00000601220 IDNKQ5T6J7 187 aa13.37□□□□□ -0.27
CHMP2A-208ENST00000601220 PLET1Q6UQ28 207 aa13.37□□□□□ -0.27
CHMP2A-208ENST00000601220 OR2C3Q8N628 320 aa13.37□□□□□ -0.27
CHMP2A-208ENST00000601220 OR5AP2Q8NGF4 316 aa13.37□□□□□ -0.27
CHMP2A-208ENST00000601220 OR1L6Q8NGR2 347 aa13.37□□□□□ -0.27
CHMP2A-208ENST00000601220 TMEM190Q8WZ59 177 aa13.37□□□□□ -0.27
CHMP2A-208ENST00000601220 ZNF414Q96IQ9 312 aa13.37□□□□□ -0.27
CHMP2A-208ENST00000601220 QTRT1Q9BXR0 403 aaKnown RBP13.37□□□□□ -0.27
CHMP2A-208ENST00000601220 YTHDF1Q9BYJ9 559 aaKnown RBP13.37□□□□□ -0.27
CHMP2A-208ENST00000601220 COMMD5Q9GZQ3 224 aa13.37□□□□□ -0.27
CHMP2A-208ENST00000601220 KMT2AQ03164 3969 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms