RNA–Protein interactions for RNA: ENST00000600310.5

UPF1-209, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-209ENST00000600310 ASPHD1Q5U4P2 390 aa15.14■□□□□ 0.01
UPF1-209ENST00000600310 HIST2H2BDQ6DRA6 164 aa15.14■□□□□ 0.01
UPF1-209ENST00000600310 SLC25A42Q86VD7 318 aa15.14■□□□□ 0.01
UPF1-209ENST00000600310 TMEM56Q96MV1 263 aa15.14■□□□□ 0.01
UPF1-209ENST00000600310 TSC22D3Q99576 134 aa15.14■□□□□ 0.01
UPF1-209ENST00000600310 SPIN2AQ99865 258 aa15.14■□□□□ 0.01
UPF1-209ENST00000600310 SPIN2BQ9BPZ2 258 aa15.14■□□□□ 0.01
UPF1-209ENST00000600310 FLVCR2Q9UPI3 526 aa15.14■□□□□ 0.01
UPF1-209ENST00000600310 TMEM56-RWDD3S4R434 201 aa15.14■□□□□ 0.01
UPF1-209ENST00000600310 TNCP24821 2201 aa15.13■□□□□ 0.01
UPF1-209ENST00000600310 TCRBV4S1A1TA0A5B7 111 aa15.13■□□□□ 0.01
UPF1-209ENST00000600310 E7EUB6 86 aa15.13■□□□□ 0.01
UPF1-209ENST00000600310 SOX15O60248 233 aa15.13■□□□□ 0.01
UPF1-209ENST00000600310 IGLV1-40P01703 118 aa15.13■□□□□ 0.01
UPF1-209ENST00000600310 OPN1MWP04001 364 aa15.13■□□□□ 0.01
UPF1-209ENST00000600310 P0C879 139 aa15.13■□□□□ 0.01
UPF1-209ENST00000600310 OPN1MW2P0DN77 364 aa15.13■□□□□ 0.01
UPF1-209ENST00000600310 OPN1MW3P0DN78 364 aa15.13■□□□□ 0.01
UPF1-209ENST00000600310 ANXA3P12429 323 aa15.13■□□□□ 0.01
UPF1-209ENST00000600310 MYOD1P15172 320 aa15.13■□□□□ 0.01
UPF1-209ENST00000600310 PSMB8P28062 276 aa15.13■□□□□ 0.01
UPF1-209ENST00000600310 UBE2MP61081 183 aaKnown RBP15.13■□□□□ 0.01
UPF1-209ENST00000600310 MZT2BQ6NZ67 158 aa15.13■□□□□ 0.01
UPF1-209ENST00000600310 NDUFA11Q86Y39 141 aa15.13■□□□□ 0.01
UPF1-209ENST00000600310 ZNF695Q8IW36 515 aa15.13■□□□□ 0.01
UPF1-209ENST00000600310 SELENOHQ8IZQ5 122 aaKnown RBP15.13■□□□□ 0.01
UPF1-209ENST00000600310 OR5M8Q8NGP6 311 aa15.13■□□□□ 0.01
UPF1-209ENST00000600310 LHFPL5Q8TAF8 219 aa15.13■□□□□ 0.01
UPF1-209ENST00000600310 RBPMSQ93062 196 aaKnown RBP15.13■□□□□ 0.01
UPF1-209ENST00000600310 IL22RA2Q969J5 263 aa15.13■□□□□ 0.01
UPF1-209ENST00000600310 PHB2Q99623 299 aa15.13■□□□□ 0.01
UPF1-209ENST00000600310 AKR1C2P52895 323 aa15.12■□□□□ 0.01
UPF1-209ENST00000600310 OR2B8PP59922 312 aa15.12■□□□□ 0.01
UPF1-209ENST00000600310 CXorf66Q5JRM2 361 aaPredicted RBP15.12■□□□□ 0.01
UPF1-209ENST00000600310 COMMD5Q9GZQ3 224 aa15.12■□□□□ 0.01
UPF1-209ENST00000600310 ZFP57Q9NU63 452 aa15.12■□□□□ 0.01
UPF1-209ENST00000600310 FKBP11Q9NYL4 201 aa15.12■□□□□ 0.01
UPF1-209ENST00000600310 PRNDQ9UKY0 176 aa15.12■□□□□ 0.01
UPF1-209ENST00000600310 NSG2Q9Y328 171 aa15.12■□□□□ 0.01
UPF1-209ENST00000600310 TSSC4Q9Y5U2 329 aaPredicted RBP15.12■□□□□ 0.01
UPF1-209ENST00000600310 A0A1B0GW64 132 aa15.11■□□□□ 0.01
UPF1-209ENST00000600310 CGB1A6NKQ9 187 aa15.11■□□□□ 0.01
UPF1-209ENST00000600310 ADARB2-AS1A8MUL3 147 aa15.11■□□□□ 0.01
UPF1-209ENST00000600310 TEX22C9J3V5 150 aa15.11■□□□□ 0.01
UPF1-209ENST00000600310 SFT2D2O95562 160 aa15.11■□□□□ 0.01
UPF1-209ENST00000600310 TCRBP04435 133 aa15.11■□□□□ 0.01
UPF1-209ENST00000600310 VAMP1P23763 118 aa15.11■□□□□ 0.01
UPF1-209ENST00000600310 SRPXP78539 464 aa15.11■□□□□ 0.01
UPF1-209ENST00000600310 PPP1R1AQ13522 171 aa15.11■□□□□ 0.01
UPF1-209ENST00000600310 TMEM268Q5VZI3 342 aa15.11■□□□□ 0.01
UPF1-209ENST00000600310 RRNAD1Q96FB5 475 aaKnown RBP15.11■□□□□ 0.01
UPF1-209ENST00000600310 FYTTD1Q96QD9 318 aaKnown RBP15.11■□□□□ 0.01
UPF1-209ENST00000600310 TMEM14BQ9NUH8 114 aa15.11■□□□□ 0.01
UPF1-209ENST00000600310 PRR13Q9NZ81 148 aa15.11■□□□□ 0.01
UPF1-209ENST00000600310 TEX50A0A1B0GTY4 177 aa15.1■□□□□ 0.01
UPF1-209ENST00000600310 FAM240BA0A1B0GVZ2 78 aa15.1■□□□□ 0.01
UPF1-209ENST00000600310 HMX3A6NHT5 357 aa15.1■□□□□ 0.01
UPF1-209ENST00000600310 C15orf61A6NNL5 157 aa15.1■□□□□ 0.01
UPF1-209ENST00000600310 RPLP1P05386 114 aaKnown RBP15.1■□□□□ 0.01
UPF1-209ENST00000600310 APELAP0DMC3 54 aa15.1■□□□□ 0.01
UPF1-209ENST00000600310 PF4V1P10720 104 aa15.1■□□□□ 0.01
UPF1-209ENST00000600310 IZUMO4Q1ZYL8 232 aa15.1■□□□□ 0.01
UPF1-209ENST00000600310 FAM219AQ8IW50 185 aa15.1■□□□□ 0.01
UPF1-209ENST00000600310 LGI3Q8N145 548 aa15.1■□□□□ 0.01
UPF1-209ENST00000600310 OR5T1Q8NG75 326 aa15.1■□□□□ 0.01
UPF1-209ENST00000600310 OR1L8Q8NGR8 309 aa15.1■□□□□ 0.01
UPF1-209ENST00000600310 OR4A16Q8NH70 328 aa15.1■□□□□ 0.01
UPF1-209ENST00000600310 FAM110DQ8TAY7 271 aaPredicted RBP15.1■□□□□ 0.01
UPF1-209ENST00000600310 MYOZ3Q8TDC0 251 aa15.1■□□□□ 0.01
UPF1-209ENST00000600310 SRSF8Q9BRL6 282 aaKnown RBP15.1■□□□□ 0.01
UPF1-209ENST00000600310 C20orf85Q9H1P6 137 aa15.1■□□□□ 0.01
UPF1-209ENST00000600310 KLK15Q9H2R5 256 aa15.1■□□□□ 0.01
UPF1-209ENST00000600310 OR51B2Q9Y5P1 312 aa15.1■□□□□ 0.01
UPF1-209ENST00000600310 PIGBOS1A0A0B4J2F0 54 aa15.09■□□□□ 0.01
UPF1-209ENST00000600310 A0A0G2JRQ6 117 aa15.09■□□□□ 0.01
UPF1-209ENST00000600310 DBX1A6NMT0 343 aa15.09■□□□□ 0.01
UPF1-209ENST00000600310 H3BUA1 57 aa15.09■□□□□ 0.01
UPF1-209ENST00000600310 BRI3O95415 125 aa15.09■□□□□ 0.01
UPF1-209ENST00000600310 ANXA7P20073 488 aaKnown RBP15.09■□□□□ 0.01
UPF1-209ENST00000600310 RAB9AP51151 201 aa15.09■□□□□ 0.01
UPF1-209ENST00000600310 RPL23AP62750 156 aaKnown RBP15.09■□□□□ 0.01
UPF1-209ENST00000600310 KHDC1LQ5JSQ8 128 aa15.09■□□□□ 0.01
UPF1-209ENST00000600310 THOC7Q6I9Y2 204 aaKnown RBP15.09■□□□□ 0.01
UPF1-209ENST00000600310 TMEM65Q6PI78 240 aa15.09■□□□□ 0.01
UPF1-209ENST00000600310 LCNL1Q6ZST4 164 aa15.09■□□□□ 0.01
UPF1-209ENST00000600310 TTC9CQ8N5M4 171 aa15.09■□□□□ 0.01
UPF1-209ENST00000600310 OR5B3Q8NH48 314 aa15.09■□□□□ 0.01
UPF1-209ENST00000600310 RNASE11Q8TAA1 199 aaKnown RBP15.09■□□□□ 0.01
UPF1-209ENST00000600310 LSM10Q969L4 123 aaKnown RBP15.09■□□□□ 0.01
UPF1-209ENST00000600310 QTRT1Q9BXR0 403 aaKnown RBP15.09■□□□□ 0.01
UPF1-209ENST00000600310 ALX4Q9H161 411 aaPredicted RBP15.09■□□□□ 0.01
UPF1-209ENST00000600310 A0A0B4J293 547 aa15.08■□□□□ 0
UPF1-209ENST00000600310 A0A0B4J2A0 478 aa15.08■□□□□ 0
UPF1-209ENST00000600310 M0QZ24 198 aa15.08■□□□□ 0
UPF1-209ENST00000600310 TRAPPC2P0DI81 140 aa15.08■□□□□ 0
UPF1-209ENST00000600310 TRAPPC2BP0DI82 140 aa15.08■□□□□ 0
UPF1-209ENST00000600310 KIAA0141Q14154 515 aaPredicted RBP15.08■□□□□ 0
UPF1-209ENST00000600310 C2orf68Q2NKX9 166 aa15.08■□□□□ 0
UPF1-209ENST00000600310 NSUN5P1Q3KNT7 163 aa15.08■□□□□ 0
UPF1-209ENST00000600310 ANKRD55Q3KP44 614 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms