RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 WIPF2Q8TF74 440 aaPredicted RBP14.81□□□□□ -0.04
CCDC9-205ENST00000600117 CASTOR1Q8WTX7 329 aa14.81□□□□□ -0.04
CCDC9-205ENST00000600117 ARPC1AQ92747 370 aa14.81□□□□□ -0.04
CCDC9-205ENST00000600117 LINC00527Q9UJ94 153 aa14.81□□□□□ -0.04
CCDC9-205ENST00000600117 ATG12O94817 140 aa14.8□□□□□ -0.04
CCDC9-205ENST00000600117 HLA-AP01891 365 aaKnown RBP14.8□□□□□ -0.04
CCDC9-205ENST00000600117 FGF2P09038 288 aa14.8□□□□□ -0.04
CCDC9-205ENST00000600117 MYOD1P15172 320 aa14.8□□□□□ -0.04
CCDC9-205ENST00000600117 MAS1LP35410 378 aa14.8□□□□□ -0.04
CCDC9-205ENST00000600117 AKR1C2P52895 323 aa14.8□□□□□ -0.04
CCDC9-205ENST00000600117 RAB25P57735 213 aa14.8□□□□□ -0.04
CCDC9-205ENST00000600117 SRPXP78539 464 aa14.8□□□□□ -0.04
CCDC9-205ENST00000600117 C19orf54Q5BKX5 351 aa14.8□□□□□ -0.04
CCDC9-205ENST00000600117 C10orf55Q5SWW7 151 aa14.8□□□□□ -0.04
CCDC9-205ENST00000600117 H2BFWTQ7Z2G1 175 aa14.8□□□□□ -0.04
CCDC9-205ENST00000600117 ZNF695Q8IW36 515 aa14.8□□□□□ -0.04
CCDC9-205ENST00000600117 LGI3Q8N145 548 aa14.8□□□□□ -0.04
CCDC9-205ENST00000600117 STPG2Q8N412 459 aa14.8□□□□□ -0.04
CCDC9-205ENST00000600117 KLHDC1Q8N7A1 406 aa14.8□□□□□ -0.04
CCDC9-205ENST00000600117 SLC35G3Q8N808 338 aa14.8□□□□□ -0.04
CCDC9-205ENST00000600117 LRTM2Q8N967 370 aa14.8□□□□□ -0.04
CCDC9-205ENST00000600117 FAM103A1Q9BTL3 118 aaKnown RBP14.8□□□□□ -0.04
CCDC9-205ENST00000600117 NSG2Q9Y328 171 aa14.8□□□□□ -0.04
CCDC9-205ENST00000600117 A0A0B4J2A0 478 aa14.79□□□□□ -0.04
CCDC9-205ENST00000600117 A0A1B0GW64 132 aa14.79□□□□□ -0.04
CCDC9-205ENST00000600117 CNIH1O95406 144 aa14.79□□□□□ -0.04
CCDC9-205ENST00000600117 PTTG1O95997 202 aa14.79□□□□□ -0.04
CCDC9-205ENST00000600117 HLA-GP17693 338 aa14.79□□□□□ -0.04
CCDC9-205ENST00000600117 RYR3Q15413 4870 aa14.79□□□□□ -0.04
CCDC9-205ENST00000600117 C4orf46Q504U0 113 aa14.79□□□□□ -0.04
CCDC9-205ENST00000600117 PLET1Q6UQ28 207 aa14.79□□□□□ -0.04
CCDC9-205ENST00000600117 OR52B4Q8NGK2 314 aa14.79□□□□□ -0.04
CCDC9-205ENST00000600117 GRPEL2Q8TAA5 225 aa14.79□□□□□ -0.04
CCDC9-205ENST00000600117 SRSF12Q8WXF0 261 aaKnown RBP14.79□□□□□ -0.04
CCDC9-205ENST00000600117 SEC22CQ9BRL7 303 aa14.79□□□□□ -0.04
CCDC9-205ENST00000600117 MARVELD1Q9BSK0 173 aa14.79□□□□□ -0.04
CCDC9-205ENST00000600117 SHPKQ9UHJ6 478 aa14.79□□□□□ -0.04
CCDC9-205ENST00000600117 CGB1A6NKQ9 187 aa14.78□□□□□ -0.04
CCDC9-205ENST00000600117 C15orf61A6NNL5 157 aa14.78□□□□□ -0.04
CCDC9-205ENST00000600117 E7EUB6 86 aa14.78□□□□□ -0.04
CCDC9-205ENST00000600117 G3V318 75 aa14.78□□□□□ -0.04
CCDC9-205ENST00000600117 DUS4LO95620 317 aaKnown RBP14.78□□□□□ -0.04
CCDC9-205ENST00000600117 IL5P05113 134 aa14.78□□□□□ -0.04
CCDC9-205ENST00000600117 KRTAP10-3P60369 221 aa14.78□□□□□ -0.04
CCDC9-205ENST00000600117 CFHR3Q02985 330 aa14.78□□□□□ -0.04
CCDC9-205ENST00000600117 C10orf99Q6UWK7 81 aa14.78□□□□□ -0.04
CCDC9-205ENST00000600117 Q6ZRM9 215 aa14.78□□□□□ -0.04
CCDC9-205ENST00000600117 LYZL2Q7Z4W2 148 aa14.78□□□□□ -0.04
CCDC9-205ENST00000600117 FAM219AQ8IW50 185 aa14.78□□□□□ -0.04
CCDC9-205ENST00000600117 CHPT1Q8WUD6 406 aa14.78□□□□□ -0.04
CCDC9-205ENST00000600117 WFDC12Q8WWY7 111 aa14.78□□□□□ -0.04
CCDC9-205ENST00000600117 LSM10Q969L4 123 aaKnown RBP14.78□□□□□ -0.04
CCDC9-205ENST00000600117 GPR146Q96CH1 333 aa14.78□□□□□ -0.04
CCDC9-205ENST00000600117 WSB1Q9Y6I7 421 aa14.78□□□□□ -0.04
CCDC9-205ENST00000600117 TET2Q6N021 2002 aaPredicted RBP14.77□□□□□ -0.04
CCDC9-205ENST00000600117 A0A0B4J293 547 aa14.77□□□□□ -0.05
CCDC9-205ENST00000600117 DBX1A6NMT0 343 aa14.77□□□□□ -0.05
CCDC9-205ENST00000600117 INMT-MINDY4F8WBC2 141 aa14.77□□□□□ -0.05
CCDC9-205ENST00000600117 SNAPC5O75971 98 aa14.77□□□□□ -0.05
CCDC9-205ENST00000600117 ACTL6BO94805 426 aa14.77□□□□□ -0.05
CCDC9-205ENST00000600117 VDAC1P21796 283 aa14.77□□□□□ -0.05
CCDC9-205ENST00000600117 PPIFP30405 207 aaKnown RBP14.77□□□□□ -0.05
CCDC9-205ENST00000600117 RPL27AP46776 148 aaKnown RBP14.77□□□□□ -0.05
CCDC9-205ENST00000600117 OR2B8PP59922 312 aa14.77□□□□□ -0.05
CCDC9-205ENST00000600117 NMSQ5H8A3 153 aa14.77□□□□□ -0.05
CCDC9-205ENST00000600117 ASPHD1Q5U4P2 390 aa14.77□□□□□ -0.05
CCDC9-205ENST00000600117 ABHD5Q8WTS1 349 aa14.77□□□□□ -0.05
CCDC9-205ENST00000600117 RRNAD1Q96FB5 475 aaKnown RBP14.77□□□□□ -0.05
CCDC9-205ENST00000600117 TMEM14BQ9NUH8 114 aa14.77□□□□□ -0.05
CCDC9-205ENST00000600117 PRNDQ9UKY0 176 aa14.77□□□□□ -0.05
CCDC9-205ENST00000600117 FOXA2Q9Y261 457 aaPredicted RBP14.77□□□□□ -0.05
CCDC9-205ENST00000600117 TRAV41A0A0B4J266 112 aa14.76□□□□□ -0.05
CCDC9-205ENST00000600117 TEX50A0A1B0GTY4 177 aa14.76□□□□□ -0.05
CCDC9-205ENST00000600117 DUXBA0A1W2PPF3 345 aa14.76□□□□□ -0.05
CCDC9-205ENST00000600117 PSMB11A5LHX3 300 aa14.76□□□□□ -0.05
CCDC9-205ENST00000600117 MSGN1A6NI15 193 aa14.76□□□□□ -0.05
CCDC9-205ENST00000600117 TEX22C9J3V5 150 aa14.76□□□□□ -0.05
CCDC9-205ENST00000600117 M0QZ24 198 aa14.76□□□□□ -0.05
CCDC9-205ENST00000600117 SRSF4Q08170 494 aaKnown RBP14.76□□□□□ -0.05
CCDC9-205ENST00000600117 ECSCRQ19T08 205 aa14.76□□□□□ -0.05
CCDC9-205ENST00000600117 MINDY2Q8NBR6 621 aa14.76□□□□□ -0.05
CCDC9-205ENST00000600117 LFNGQ8NES3 379 aa14.76□□□□□ -0.05
CCDC9-205ENST00000600117 RNASE11Q8TAA1 199 aaKnown RBP14.76□□□□□ -0.05
CCDC9-205ENST00000600117 ZNF431Q8TF32 576 aaPredicted RBP14.76□□□□□ -0.05
CCDC9-205ENST00000600117 MITD1Q8WV92 249 aa14.76□□□□□ -0.05
CCDC9-205ENST00000600117 OPN1MWP04001 364 aa14.75□□□□□ -0.05
CCDC9-205ENST00000600117 OPN1MW2P0DN77 364 aa14.75□□□□□ -0.05
CCDC9-205ENST00000600117 OPN1MW3P0DN78 364 aa14.75□□□□□ -0.05
CCDC9-205ENST00000600117 AKIRIN2Q53H80 203 aa14.75□□□□□ -0.05
CCDC9-205ENST00000600117 UNQ5815/PRO19632Q6UWF5 114 aa14.75□□□□□ -0.05
CCDC9-205ENST00000600117 CENPVQ7Z7K6 275 aaPredicted RBP14.75□□□□□ -0.05
CCDC9-205ENST00000600117 OR4A16Q8NH70 328 aa14.75□□□□□ -0.05
CCDC9-205ENST00000600117 COQ8AQ8NI60 647 aa14.75□□□□□ -0.05
CCDC9-205ENST00000600117 COMMD5Q9GZQ3 224 aa14.75□□□□□ -0.05
CCDC9-205ENST00000600117 OR51B2Q9Y5P1 312 aa14.75□□□□□ -0.05
CCDC9-205ENST00000600117 PIGBOS1A0A0B4J2F0 54 aa14.74□□□□□ -0.05
CCDC9-205ENST00000600117 HMX3A6NHT5 357 aa14.74□□□□□ -0.05
CCDC9-205ENST00000600117 SOX15O60248 233 aa14.74□□□□□ -0.05
CCDC9-205ENST00000600117 TMEM267Q0VDI3 215 aaPredicted RBP14.74□□□□□ -0.05
CCDC9-205ENST00000600117 RGS21Q2M5E4 152 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms