RNA–Protein interactions for RNA: ENST00000600055.1

LIG1-219, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 602 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-219ENST00000600055 MAS1LP35410 378 aa11.79□□□□□ -0.52
LIG1-219ENST00000600055 RAB25P57735 213 aa11.79□□□□□ -0.52
LIG1-219ENST00000600055 RND3P61587 244 aa11.79□□□□□ -0.52
LIG1-219ENST00000600055 C19orf35Q6ZS72 473 aa11.79□□□□□ -0.52
LIG1-219ENST00000600055 GDPD1Q8N9F7 314 aa11.79□□□□□ -0.52
LIG1-219ENST00000600055 ADAD2Q8NCV1 583 aaKnown RBP11.79□□□□□ -0.52
LIG1-219ENST00000600055 OR11H1Q8NG94 326 aa11.79□□□□□ -0.52
LIG1-219ENST00000600055 OR51S1Q8NGJ8 323 aa11.79□□□□□ -0.52
LIG1-219ENST00000600055 TRIM63Q969Q1 353 aa11.79□□□□□ -0.52
LIG1-219ENST00000600055 ZNF486Q96H40 463 aaPredicted RBP11.79□□□□□ -0.52
LIG1-219ENST00000600055 SPIN2AQ99865 258 aa11.79□□□□□ -0.52
LIG1-219ENST00000600055 SPIN2BQ9BPZ2 258 aa11.79□□□□□ -0.52
LIG1-219ENST00000600055 SLA2Q9H6Q3 261 aa11.79□□□□□ -0.52
LIG1-219ENST00000600055 CGB1A6NKQ9 187 aa11.78□□□□□ -0.52
LIG1-219ENST00000600055 MARCH11A6NNE9 402 aa11.78□□□□□ -0.52
LIG1-219ENST00000600055 RBMXL2O75526 392 aaKnown RBP11.78□□□□□ -0.52
LIG1-219ENST00000600055 OR9G9P0C7N8 305 aa11.78□□□□□ -0.52
LIG1-219ENST00000600055 AP3S2P59780 193 aa11.78□□□□□ -0.52
LIG1-219ENST00000600055 ERVK-16P61578 105 aa11.78□□□□□ -0.52
LIG1-219ENST00000600055 RUNX1Q01196 453 aa11.78□□□□□ -0.52
LIG1-219ENST00000600055 DEFA6Q01524 100 aa11.78□□□□□ -0.52
LIG1-219ENST00000600055 Q8N402 240 aa11.78□□□□□ -0.52
LIG1-219ENST00000600055 OR1N2Q8NGR9 330 aa11.78□□□□□ -0.52
LIG1-219ENST00000600055 ZFAND1Q8TCF1 268 aa11.78□□□□□ -0.52
LIG1-219ENST00000600055 WDR12Q9GZL7 423 aaKnown RBP11.78□□□□□ -0.52
LIG1-219ENST00000600055 NSG2Q9Y328 171 aa11.78□□□□□ -0.52
LIG1-219ENST00000600055 H3BUA1 57 aa11.77□□□□□ -0.53
LIG1-219ENST00000600055 CTSDP07339 412 aaPredicted RBP11.77□□□□□ -0.53
LIG1-219ENST00000600055 LGALS1P09382 135 aaKnown RBP11.77□□□□□ -0.53
LIG1-219ENST00000600055 INPP1P49441 399 aa11.77□□□□□ -0.53
LIG1-219ENST00000600055 OR2B8PP59922 312 aa11.77□□□□□ -0.53
LIG1-219ENST00000600055 FHL3Q13643 280 aa11.77□□□□□ -0.53
LIG1-219ENST00000600055 KLF9Q13886 244 aaPredicted RBP11.77□□□□□ -0.53
LIG1-219ENST00000600055 BEAN1Q3B7T3 259 aa11.77□□□□□ -0.53
LIG1-219ENST00000600055 TTC9CQ8N5M4 171 aa11.77□□□□□ -0.53
LIG1-219ENST00000600055 TP53RKQ96S44 253 aa11.77□□□□□ -0.53
LIG1-219ENST00000600055 RTBDNQ9BSG5 229 aaPredicted RBP11.77□□□□□ -0.53
LIG1-219ENST00000600055 SRRQ9GZT4 340 aa11.77□□□□□ -0.53
LIG1-219ENST00000600055 FAM212BQ9NTI7 297 aaPredicted RBP11.77□□□□□ -0.53
LIG1-219ENST00000600055 MCUBQ9NWR8 336 aa11.77□□□□□ -0.53
LIG1-219ENST00000600055 COPZ2Q9P299 210 aa11.77□□□□□ -0.53
LIG1-219ENST00000600055 IGHV4OR15-8A0A075B7B6 117 aa11.76□□□□□ -0.53
LIG1-219ENST00000600055 A0A087WW49 117 aa11.76□□□□□ -0.53
LIG1-219ENST00000600055 REG1AP05451 166 aa11.76□□□□□ -0.53
LIG1-219ENST00000600055 AREGP15514 252 aa11.76□□□□□ -0.53
LIG1-219ENST00000600055 ZNF846Q147U1 533 aa11.76□□□□□ -0.53
LIG1-219ENST00000600055 SP6Q3SY56 376 aa11.76□□□□□ -0.53
LIG1-219ENST00000600055 DEDD2Q8WXF8 326 aa11.76□□□□□ -0.53
LIG1-219ENST00000600055 RCC1LQ96I51 464 aaKnown RBP11.76□□□□□ -0.53
LIG1-219ENST00000600055 SEC22AQ96IW7 307 aa11.76□□□□□ -0.53
LIG1-219ENST00000600055 PRRT1Q99946 306 aa11.76□□□□□ -0.53
LIG1-219ENST00000600055 C5orf66Q9H5L9 145 aa11.76□□□□□ -0.53
LIG1-219ENST00000600055 GPR132Q9UNW8 380 aa11.76□□□□□ -0.53
LIG1-219ENST00000600055 TNCP24821 2201 aa11.76□□□□□ -0.53
LIG1-219ENST00000600055 C3orf85A0A1B0GTC6 90 aa11.75□□□□□ -0.53
LIG1-219ENST00000600055 TEX50A0A1B0GTY4 177 aa11.75□□□□□ -0.53
LIG1-219ENST00000600055 C13orf42A0A1B0GVH6 325 aa11.75□□□□□ -0.53
LIG1-219ENST00000600055 H0Y980 276 aa11.75□□□□□ -0.53
LIG1-219ENST00000600055 BRI3O95415 125 aa11.75□□□□□ -0.53
LIG1-219ENST00000600055 SERPINE2P07093 398 aa11.75□□□□□ -0.53
LIG1-219ENST00000600055 ECI1P42126 302 aa11.75□□□□□ -0.53
LIG1-219ENST00000600055 ZNF616Q08AN1 781 aa11.75□□□□□ -0.53
LIG1-219ENST00000600055 TOMM5Q8N4H5 51 aa11.75□□□□□ -0.53
LIG1-219ENST00000600055 CCDC71LQ8N9Z2 235 aa11.75□□□□□ -0.53
LIG1-219ENST00000600055 DPF1Q92782 380 aa11.75□□□□□ -0.53
LIG1-219ENST00000600055 COMMD5Q9GZQ3 224 aa11.75□□□□□ -0.53
LIG1-219ENST00000600055 SLC2A8Q9NY64 477 aa11.75□□□□□ -0.53
LIG1-219ENST00000600055 C14orf166Q9Y224 244 aaKnown RBP11.75□□□□□ -0.53
LIG1-219ENST00000600055 ANKRD34BA5PLL1 514 aa11.74□□□□□ -0.53
LIG1-219ENST00000600055 DBX1A6NMT0 343 aa11.74□□□□□ -0.53
LIG1-219ENST00000600055 NPIPB5A8MRT5 1133 aa11.74□□□□□ -0.53
LIG1-219ENST00000600055 PRB2P02812 416 aaPredicted RBP11.74□□□□□ -0.53
LIG1-219ENST00000600055 OR8U8P0C7N1 319 aa11.74□□□□□ -0.53
LIG1-219ENST00000600055 PSMB6P28072 239 aa11.74□□□□□ -0.53
LIG1-219ENST00000600055 FAUP35544 74 aaKnown RBP11.74□□□□□ -0.53
LIG1-219ENST00000600055 SLURP1P55000 103 aa11.74□□□□□ -0.53
LIG1-219ENST00000600055 RHOGP84095 191 aa11.74□□□□□ -0.53
LIG1-219ENST00000600055 SURF2Q15527 256 aaPredicted RBP11.74□□□□□ -0.53
LIG1-219ENST00000600055 BAK1Q16611 211 aa11.74□□□□□ -0.53
LIG1-219ENST00000600055 IZUMO4Q1ZYL8 232 aa11.74□□□□□ -0.53
LIG1-219ENST00000600055 KPRPQ5T749 579 aaPredicted RBP11.74□□□□□ -0.53
LIG1-219ENST00000600055 TRIQKQ629K1 86 aa11.74□□□□□ -0.53
LIG1-219ENST00000600055 OR10W1Q8NGF6 305 aa11.74□□□□□ -0.53
LIG1-219ENST00000600055 SDHCQ99643 169 aaPredicted RBP11.74□□□□□ -0.53
LIG1-219ENST00000600055 CCDC32Q9BV29 185 aa11.74□□□□□ -0.53
LIG1-219ENST00000600055 AKIP1Q9NQ31 210 aa11.74□□□□□ -0.53
LIG1-219ENST00000600055 SCP2D1Q9UJQ7 156 aa11.74□□□□□ -0.53
LIG1-219ENST00000600055 ZNF257Q9Y2Q1 563 aa11.74□□□□□ -0.53
LIG1-219ENST00000600055 MEGF8Q7Z7M0 2845 aa11.73□□□□□ -0.53
LIG1-219ENST00000600055 TRBV9A0A0B4J1U6 114 aa11.73□□□□□ -0.53
LIG1-219ENST00000600055 A0A0G2JLM5 398 aa11.73□□□□□ -0.53
LIG1-219ENST00000600055 IGLC7A0M8Q6 106 aa11.73□□□□□ -0.53
LIG1-219ENST00000600055 LINC01619G3V211 115 aa11.73□□□□□ -0.53
LIG1-219ENST00000600055 SNAPC5O75971 98 aa11.73□□□□□ -0.53
LIG1-219ENST00000600055 OR2J3O76001 311 aa11.73□□□□□ -0.53
LIG1-219ENST00000600055 IGKV1-5P01602 117 aa11.73□□□□□ -0.53
LIG1-219ENST00000600055 HSPB1P04792 205 aaKnown RBP11.73□□□□□ -0.53
LIG1-219ENST00000600055 CRYGCP07315 174 aa11.73□□□□□ -0.53
LIG1-219ENST00000600055 OR5AC1P0C628 307 aa11.73□□□□□ -0.53
LIG1-219ENST00000600055 CTRB1P17538 263 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms