RNA–Protein interactions for RNA: ENST00000599097.1

HOMER3-210, Transcript of homer scaffold protein 3, humanhuman

TSL 3

Gene HOMER3, Length 770 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-210ENST00000599097 SLC38A6Q8IZM9 456 aa13.15□□□□□ -0.3
HOMER3-210ENST00000599097 SECTM1Q8WVN6 248 aa13.15□□□□□ -0.3
HOMER3-210ENST00000599097 WDR89Q96FK6 387 aaPredicted RBP13.15□□□□□ -0.3
HOMER3-210ENST00000599097 CCDC140Q96MF4 163 aa13.15□□□□□ -0.3
HOMER3-210ENST00000599097 GGTLC1Q9BX51 225 aa13.15□□□□□ -0.3
HOMER3-210ENST00000599097 RETNQ9HD89 108 aa13.15□□□□□ -0.3
HOMER3-210ENST00000599097 ELF5Q9UKW6 265 aaPredicted RBP13.15□□□□□ -0.3
HOMER3-210ENST00000599097 HPRT1P00492 218 aa13.14□□□□□ -0.31
HOMER3-210ENST00000599097 IGLV2-14P01704 120 aa13.14□□□□□ -0.31
HOMER3-210ENST00000599097 NQO2P16083 231 aa13.14□□□□□ -0.31
HOMER3-210ENST00000599097 RPL5P46777 297 aaKnown RBP13.14□□□□□ -0.31
HOMER3-210ENST00000599097 EIF4EBP1Q13541 118 aaPredicted RBP13.14□□□□□ -0.31
HOMER3-210ENST00000599097 SSX9Q7RTT3 188 aa13.14□□□□□ -0.31
HOMER3-210ENST00000599097 NR2C2APQ86WQ0 139 aa13.14□□□□□ -0.31
HOMER3-210ENST00000599097 SPAG16Q8N0X2 631 aa13.14□□□□□ -0.31
HOMER3-210ENST00000599097 OR13F1Q8NGS4 319 aa13.14□□□□□ -0.31
HOMER3-210ENST00000599097 LGALS14Q8TCE9 139 aa13.14□□□□□ -0.31
HOMER3-210ENST00000599097 FAM110AQ9BQ89 295 aa13.14□□□□□ -0.31
HOMER3-210ENST00000599097 DIABLOQ9NR28 239 aa13.14□□□□□ -0.31
HOMER3-210ENST00000599097 DYNC2H1Q8NCM8 4307 aaKnown RBP13.14□□□□□ -0.31
HOMER3-210ENST00000599097 LOC102724200A0A096LPH7 203 aaPredicted RBP13.13□□□□□ -0.31
HOMER3-210ENST00000599097 TMEM213A2RRL7 107 aa13.13□□□□□ -0.31
HOMER3-210ENST00000599097 RBMY1BA6NDE4 496 aaKnown RBP13.13□□□□□ -0.31
HOMER3-210ENST00000599097 RBMY1EA6NEQ0 496 aaKnown RBP13.13□□□□□ -0.31
HOMER3-210ENST00000599097 NDUFB8O95169 186 aa13.13□□□□□ -0.31
HOMER3-210ENST00000599097 PPYP01298 95 aa13.13□□□□□ -0.31
HOMER3-210ENST00000599097 HLA-AP01891 365 aaKnown RBP13.13□□□□□ -0.31
HOMER3-210ENST00000599097 RBMY1DP0C7P1 496 aaKnown RBP13.13□□□□□ -0.31
HOMER3-210ENST00000599097 AREGP15514 252 aa13.13□□□□□ -0.31
HOMER3-210ENST00000599097 FCGR2CP31995 323 aa13.13□□□□□ -0.31
HOMER3-210ENST00000599097 ERVK-16P61578 105 aa13.13□□□□□ -0.31
HOMER3-210ENST00000599097 TMEM61Q8N0U2 210 aa13.13□□□□□ -0.31
HOMER3-210ENST00000599097 UXS1Q8NBZ7 420 aa13.13□□□□□ -0.31
HOMER3-210ENST00000599097 FANCD2OSQ96PS1 177 aa13.13□□□□□ -0.31
HOMER3-210ENST00000599097 GAR1Q9NY12 217 aaKnown RBP13.13□□□□□ -0.31
HOMER3-210ENST00000599097 COMMD9Q9P000 198 aa13.13□□□□□ -0.31
HOMER3-210ENST00000599097 MRPL27Q9P0M9 148 aaKnown RBP13.13□□□□□ -0.31
HOMER3-210ENST00000599097 DMRT1Q9Y5R6 373 aa13.13□□□□□ -0.31
HOMER3-210ENST00000599097 CSMD3Q7Z407 3707 aa13.13□□□□□ -0.31
HOMER3-210ENST00000599097 IGLV11-55A0A075B6I3 123 aa13.12□□□□□ -0.31
HOMER3-210ENST00000599097 SMIM30A4D0T7 59 aa13.12□□□□□ -0.31
HOMER3-210ENST00000599097 ALDH3B2P48448 385 aa13.12□□□□□ -0.31
HOMER3-210ENST00000599097 APOC4P55056 127 aa13.12□□□□□ -0.31
HOMER3-210ENST00000599097 PLET1Q6UQ28 207 aa13.12□□□□□ -0.31
HOMER3-210ENST00000599097 HOGA1Q86XE5 327 aa13.12□□□□□ -0.31
HOMER3-210ENST00000599097 OR1L6Q8NGR2 347 aa13.12□□□□□ -0.31
HOMER3-210ENST00000599097 ATP6V0BQ99437 205 aa13.12□□□□□ -0.31
HOMER3-210ENST00000599097 QTRT1Q9BXR0 403 aaKnown RBP13.12□□□□□ -0.31
HOMER3-210ENST00000599097 SLC5A7Q9GZV3 580 aa13.12□□□□□ -0.31
HOMER3-210ENST00000599097 SSX5O60225 188 aa13.11□□□□□ -0.31
HOMER3-210ENST00000599097 CLEC3BP05452 202 aa13.11□□□□□ -0.31
HOMER3-210ENST00000599097 PTBP1P26599 531 aaKnown RBP eCLIP13.11□□□□□ -0.31
HOMER3-210ENST00000599097 HERV-K104P61576 105 aa13.11□□□□□ -0.31
HOMER3-210ENST00000599097 POU2AF1Q16633 256 aa13.11□□□□□ -0.31
HOMER3-210ENST00000599097 LAMTOR1Q6IAA8 161 aa13.11□□□□□ -0.31
HOMER3-210ENST00000599097 GPR141Q7Z602 305 aa13.11□□□□□ -0.31
HOMER3-210ENST00000599097 DMBX1Q8NFW5 382 aa13.11□□□□□ -0.31
HOMER3-210ENST00000599097 VN1R17PQ8TDU5 208 aa13.11□□□□□ -0.31
HOMER3-210ENST00000599097 SPAG8Q99932 426 aaPredicted RBP13.11□□□□□ -0.31
HOMER3-210ENST00000599097 PLEKHA2Q9HB19 425 aa13.11□□□□□ -0.31
HOMER3-210ENST00000599097 LYSTQ99698 3801 aa13.11□□□□□ -0.31
HOMER3-210ENST00000599097 RYR2Q92736 4967 aa13.1□□□□□ -0.31
HOMER3-210ENST00000599097 TRAV18A0A075B6X5 111 aa13.1□□□□□ -0.31
HOMER3-210ENST00000599097 TNFSF12O43508 249 aa13.1□□□□□ -0.31
HOMER3-210ENST00000599097 IGHV3-23P01764 117 aa13.1□□□□□ -0.31
HOMER3-210ENST00000599097 OR2B8PP59922 312 aa13.1□□□□□ -0.31
HOMER3-210ENST00000599097 AADACL3Q5VUY0 350 aa13.1□□□□□ -0.31
HOMER3-210ENST00000599097 SPSB3Q6PJ21 355 aa13.1□□□□□ -0.31
HOMER3-210ENST00000599097 BTNL8Q6UX41 500 aa13.1□□□□□ -0.31
HOMER3-210ENST00000599097 CROCCP3Q8IVE0 287 aa13.1□□□□□ -0.31
HOMER3-210ENST00000599097 CACNG8Q8WXS5 425 aa13.1□□□□□ -0.31
HOMER3-210ENST00000599097 YIPF6Q96EC8 236 aa13.1□□□□□ -0.31
HOMER3-210ENST00000599097 BCL7BQ9BQE9 202 aa13.1□□□□□ -0.31
HOMER3-210ENST00000599097 WFDC10AQ9H1F0 79 aa13.1□□□□□ -0.31
HOMER3-210ENST00000599097 IFT46Q9NQC8 304 aa13.1□□□□□ -0.31
HOMER3-210ENST00000599097 CCL28Q9NRJ3 127 aa13.1□□□□□ -0.31
HOMER3-210ENST00000599097 MLXQ9UH92 298 aa13.1□□□□□ -0.31
HOMER3-210ENST00000599097 TP53TG1Q9Y2A0 90 aa13.1□□□□□ -0.31
HOMER3-210ENST00000599097 UBE2CO00762 179 aa13.09□□□□□ -0.31
HOMER3-210ENST00000599097 SCAF4O95104 1147 aaKnown RBP13.09□□□□□ -0.31
HOMER3-210ENST00000599097 REG1AP05451 166 aa13.09□□□□□ -0.31
HOMER3-210ENST00000599097 GPR183P32249 361 aa13.09□□□□□ -0.31
HOMER3-210ENST00000599097 SDC2P34741 201 aa13.09□□□□□ -0.31
HOMER3-210ENST00000599097 OR2C3Q8N628 320 aa13.09□□□□□ -0.31
HOMER3-210ENST00000599097 GDPD1Q8N9F7 314 aa13.09□□□□□ -0.31
HOMER3-210ENST00000599097 OR5AP2Q8NGF4 316 aa13.09□□□□□ -0.31
HOMER3-210ENST00000599097 ZNF502Q8TBZ5 544 aa13.09□□□□□ -0.31
HOMER3-210ENST00000599097 GIMAP1Q8WWP7 306 aa13.09□□□□□ -0.31
HOMER3-210ENST00000599097 BSCL2Q96G97 398 aaPredicted RBP13.09□□□□□ -0.31
HOMER3-210ENST00000599097 C5orf66Q9H5L9 145 aa13.09□□□□□ -0.31
HOMER3-210ENST00000599097 DAZ1Q9NQZ3 744 aaKnown RBP13.09□□□□□ -0.31
HOMER3-210ENST00000599097 A0A1B0GW64 132 aa13.08□□□□□ -0.32
HOMER3-210ENST00000599097 IGLC7A0M8Q6 106 aa13.08□□□□□ -0.32
HOMER3-210ENST00000599097 NUPR2A6NF83 97 aa13.08□□□□□ -0.32
HOMER3-210ENST00000599097 MFSD2BA6NFX1 497 aa13.08□□□□□ -0.32
HOMER3-210ENST00000599097 E7EUB6 86 aa13.08□□□□□ -0.32
HOMER3-210ENST00000599097 SULT1C2O00338 296 aa13.08□□□□□ -0.32
HOMER3-210ENST00000599097 UPK2O00526 184 aa13.08□□□□□ -0.32
HOMER3-210ENST00000599097 TRAPPC2P0DI81 140 aa13.08□□□□□ -0.32
HOMER3-210ENST00000599097 TRAPPC2BP0DI82 140 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms