RNA–Protein interactions for RNA: ENST00000597965.2

PNKP-210, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 351 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-210ENST00000597965 MARC2Q969Z3 335 aa12.79□□□□□ -0.36
PNKP-210ENST00000597965 WDR89Q96FK6 387 aaPredicted RBP12.79□□□□□ -0.36
PNKP-210ENST00000597965 CXorf58Q96LI9 332 aa12.79□□□□□ -0.36
PNKP-210ENST00000597965 GGTLC1Q9BX51 225 aa12.79□□□□□ -0.36
PNKP-210ENST00000597965 ATG5Q9H1Y0 275 aa12.79□□□□□ -0.36
PNKP-210ENST00000597965 RBMX2Q9Y388 322 aaKnown RBP12.79□□□□□ -0.36
PNKP-210ENST00000597965 BIRC6Q9NR09 4857 aa12.78□□□□□ -0.36
PNKP-210ENST00000597965 LOC102724200A0A096LPH7 203 aaPredicted RBP12.78□□□□□ -0.36
PNKP-210ENST00000597965 TRBV7-1A0A0A6YYK4 115 aa12.78□□□□□ -0.36
PNKP-210ENST00000597965 ZNF320A2RRD8 509 aa12.78□□□□□ -0.36
PNKP-210ENST00000597965 NOTOA8MTQ0 251 aa12.78□□□□□ -0.36
PNKP-210ENST00000597965 A8MWP6 167 aa12.78□□□□□ -0.36
PNKP-210ENST00000597965 RGS5O15539 181 aa12.78□□□□□ -0.36
PNKP-210ENST00000597965 DEFA4P12838 97 aa12.78□□□□□ -0.36
PNKP-210ENST00000597965 IFITM3Q01628 133 aa12.78□□□□□ -0.36
PNKP-210ENST00000597965 IDNKQ5T6J7 187 aa12.78□□□□□ -0.36
PNKP-210ENST00000597965 SFXN4Q6P4A7 337 aa12.78□□□□□ -0.36
PNKP-210ENST00000597965 TMEM167AQ8TBQ9 72 aa12.78□□□□□ -0.36
PNKP-210ENST00000597965 FYTTD1Q96QD9 318 aaKnown RBP12.78□□□□□ -0.36
PNKP-210ENST00000597965 TRAV25A0A0B4J276 109 aa12.77□□□□□ -0.37
PNKP-210ENST00000597965 NUPR2A6NF83 97 aa12.77□□□□□ -0.37
PNKP-210ENST00000597965 TEX22C9J3V5 150 aa12.77□□□□□ -0.37
PNKP-210ENST00000597965 NDUFB8O95169 186 aa12.77□□□□□ -0.37
PNKP-210ENST00000597965 HLA-AP01891 365 aaKnown RBP12.77□□□□□ -0.37
PNKP-210ENST00000597965 CRYGCP07315 174 aa12.77□□□□□ -0.37
PNKP-210ENST00000597965 ZNF735P0CB33 412 aa12.77□□□□□ -0.37
PNKP-210ENST00000597965 PLA2G7Q13093 441 aa12.77□□□□□ -0.37
PNKP-210ENST00000597965 SPANXN2Q5MJ10 180 aa12.77□□□□□ -0.37
PNKP-210ENST00000597965 C10orf55Q5SWW7 151 aa12.77□□□□□ -0.37
PNKP-210ENST00000597965 HACD4Q5VWC8 232 aa12.77□□□□□ -0.37
PNKP-210ENST00000597965 CNIH2Q6PI25 160 aa12.77□□□□□ -0.37
PNKP-210ENST00000597965 CLEC19AQ6UXS0 136 aa12.77□□□□□ -0.37
PNKP-210ENST00000597965 RBPMS2Q6ZRY4 209 aaKnown RBP12.77□□□□□ -0.37
PNKP-210ENST00000597965 SOSTQ9BQB4 213 aa12.77□□□□□ -0.37
PNKP-210ENST00000597965 ST6GALNAC5Q9BVH7 336 aa12.77□□□□□ -0.37
PNKP-210ENST00000597965 WFDC10AQ9H1F0 79 aa12.77□□□□□ -0.37
PNKP-210ENST00000597965 THYN1Q9P016 225 aa12.77□□□□□ -0.37
PNKP-210ENST00000597965 COMMD3Q9UBI1 195 aa12.77□□□□□ -0.37
PNKP-210ENST00000597965 DMRT1Q9Y5R6 373 aa12.77□□□□□ -0.37
PNKP-210ENST00000597965 V9GYH0 126 aa12.77□□□□□ -0.37
PNKP-210ENST00000597965 HMX3A6NHT5 357 aa12.76□□□□□ -0.37
PNKP-210ENST00000597965 CYB5BO43169 146 aa12.76□□□□□ -0.37
PNKP-210ENST00000597965 HPGDSO60760 199 aa12.76□□□□□ -0.37
PNKP-210ENST00000597965 PSMB6P28072 239 aa12.76□□□□□ -0.37
PNKP-210ENST00000597965 RPL8P62917 257 aaKnown RBP12.76□□□□□ -0.37
PNKP-210ENST00000597965 CDNFQ49AH0 187 aa12.76□□□□□ -0.37
PNKP-210ENST00000597965 ZNF66Q6ZN08 573 aa12.76□□□□□ -0.37
PNKP-210ENST00000597965 TMEM61Q8N0U2 210 aa12.76□□□□□ -0.37
PNKP-210ENST00000597965 PUSL1Q8N0Z8 303 aaKnown RBP12.76□□□□□ -0.37
PNKP-210ENST00000597965 OR4A5Q8NH83 315 aa12.76□□□□□ -0.37
PNKP-210ENST00000597965 TCTEX1D2Q8WW35 142 aa12.76□□□□□ -0.37
PNKP-210ENST00000597965 SDHCQ99643 169 aaPredicted RBP12.76□□□□□ -0.37
PNKP-210ENST00000597965 DAPK2Q9UIK4 370 aa12.76□□□□□ -0.37
PNKP-210ENST00000597965 TMEM127O75204 238 aa12.75□□□□□ -0.37
PNKP-210ENST00000597965 MYOD1P15172 320 aa12.75□□□□□ -0.37
PNKP-210ENST00000597965 NFYAP23511 347 aaPredicted RBP12.75□□□□□ -0.37
PNKP-210ENST00000597965 APOC4P55056 127 aa12.75□□□□□ -0.37
PNKP-210ENST00000597965 KLK9Q2XQG4 91 aa12.75□□□□□ -0.37
PNKP-210ENST00000597965 OR2B11Q5JQS5 317 aa12.75□□□□□ -0.37
PNKP-210ENST00000597965 SLC38A6Q8IZM9 456 aa12.75□□□□□ -0.37
PNKP-210ENST00000597965 VKORC1L1Q8N0U8 176 aa12.75□□□□□ -0.37
PNKP-210ENST00000597965 UXS1Q8NBZ7 420 aa12.75□□□□□ -0.37
PNKP-210ENST00000597965 LINC00476Q8WZB0 136 aa12.75□□□□□ -0.37
PNKP-210ENST00000597965 CCDC140Q96MF4 163 aa12.75□□□□□ -0.37
PNKP-210ENST00000597965 MRPL27Q9P0M9 148 aaKnown RBP12.75□□□□□ -0.37
PNKP-210ENST00000597965 KLK9Q9UKQ9 250 aa12.75□□□□□ -0.37
PNKP-210ENST00000597965 SPATA2Q9UM82 520 aa12.75□□□□□ -0.37
PNKP-210ENST00000597965 TP53TG1Q9Y2A0 90 aa12.75□□□□□ -0.37
PNKP-210ENST00000597965 UFC1Q9Y3C8 167 aa12.75□□□□□ -0.37
PNKP-210ENST00000597965 IGKV1D-8A0A087WSZ0 117 aa12.74□□□□□ -0.37
PNKP-210ENST00000597965 TMEM213A2RRL7 107 aa12.74□□□□□ -0.37
PNKP-210ENST00000597965 CXorf65A6NEN9 183 aa12.74□□□□□ -0.37
PNKP-210ENST00000597965 UPK1BO75841 260 aa12.74□□□□□ -0.37
PNKP-210ENST00000597965 IL6RP08887 468 aaPredicted RBP12.74□□□□□ -0.37
PNKP-210ENST00000597965 CTRB1P17538 263 aa12.74□□□□□ -0.37
PNKP-210ENST00000597965 BMI1P35226 326 aa12.74□□□□□ -0.37
PNKP-210ENST00000597965 ELLP55199 621 aaPredicted RBP12.74□□□□□ -0.37
PNKP-210ENST00000597965 RPL30P62888 115 aaKnown RBP12.74□□□□□ -0.37
PNKP-210ENST00000597965 CTRB2Q6GPI1 263 aa12.74□□□□□ -0.37
PNKP-210ENST00000597965 Q6ZWC4 215 aa12.74□□□□□ -0.37
PNKP-210ENST00000597965 SNX29P2Q8IUI4 249 aa12.74□□□□□ -0.37
PNKP-210ENST00000597965 OR1L6Q8NGR2 347 aa12.74□□□□□ -0.37
PNKP-210ENST00000597965 DIRAS2Q96HU8 199 aa12.74□□□□□ -0.37
PNKP-210ENST00000597965 FANCD2OSQ96PS1 177 aa12.74□□□□□ -0.37
PNKP-210ENST00000597965 SRSF8Q9BRL6 282 aaKnown RBP12.74□□□□□ -0.37
PNKP-210ENST00000597965 OVOL2Q9BRP0 275 aa12.74□□□□□ -0.37
PNKP-210ENST00000597965 MLXQ9UH92 298 aa12.74□□□□□ -0.37
PNKP-210ENST00000597965 FABP12A6NFH5 140 aa12.73□□□□□ -0.37
PNKP-210ENST00000597965 UBE2CO00762 179 aa12.73□□□□□ -0.37
PNKP-210ENST00000597965 SCAF4O95104 1147 aaKnown RBP12.73□□□□□ -0.37
PNKP-210ENST00000597965 IGLV2-14P01704 120 aa12.73□□□□□ -0.37
PNKP-210ENST00000597965 IGHV3-23P01764 117 aa12.73□□□□□ -0.37
PNKP-210ENST00000597965 HLA-GP17693 338 aa12.73□□□□□ -0.37
PNKP-210ENST00000597965 GNG2P59768 71 aa12.73□□□□□ -0.37
PNKP-210ENST00000597965 MSMO1Q15800 293 aa12.73□□□□□ -0.37
PNKP-210ENST00000597965 ZNF79Q15937 498 aa12.73□□□□□ -0.37
PNKP-210ENST00000597965 TM4SF20Q53R12 229 aa12.73□□□□□ -0.37
PNKP-210ENST00000597965 WFDC3Q8IUB2 231 aa12.73□□□□□ -0.37
PNKP-210ENST00000597965 TMEM217Q8N7C4 229 aa12.73□□□□□ -0.37
PNKP-210ENST00000597965 OR5H6Q8NGV6 325 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms