RNA–Protein interactions for RNA: ENST00000595758.5

LIG1-208, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-208ENST00000595758 ASPHD1Q5U4P2 390 aa11.21□□□□□ -0.61
LIG1-208ENST00000595758 SGPP2Q8IWX5 399 aa11.21□□□□□ -0.61
LIG1-208ENST00000595758 ADAD2Q8NCV1 583 aaKnown RBP11.21□□□□□ -0.61
LIG1-208ENST00000595758 OR4F17Q8NGA8 305 aa11.21□□□□□ -0.61
LIG1-208ENST00000595758 FAM110DQ8TAY7 271 aaPredicted RBP11.21□□□□□ -0.61
LIG1-208ENST00000595758 SEC22AQ96IW7 307 aa11.21□□□□□ -0.61
LIG1-208ENST00000595758 FYTTD1Q96QD9 318 aaKnown RBP11.21□□□□□ -0.61
LIG1-208ENST00000595758 OR4F4Q96R69 305 aa11.21□□□□□ -0.61
LIG1-208ENST00000595758 C7orf50Q9BRJ6 194 aaKnown RBP11.21□□□□□ -0.61
LIG1-208ENST00000595758 COMMD5Q9GZQ3 224 aa11.21□□□□□ -0.61
LIG1-208ENST00000595758 KCNIP3Q9Y2W7 256 aa11.21□□□□□ -0.61
LIG1-208ENST00000595758 VWFP04275 2813 aa11.2□□□□□ -0.62
LIG1-208ENST00000595758 NUDT19A8MXV4 375 aa11.2□□□□□ -0.62
LIG1-208ENST00000595758 FGF2P09038 288 aa11.2□□□□□ -0.62
LIG1-208ENST00000595758 OR5AC1P0C628 307 aa11.2□□□□□ -0.62
LIG1-208ENST00000595758 MYOD1P15172 320 aa11.2□□□□□ -0.62
LIG1-208ENST00000595758 AKR1C4P17516 323 aa11.2□□□□□ -0.62
LIG1-208ENST00000595758 CCR6P51684 374 aa11.2□□□□□ -0.62
LIG1-208ENST00000595758 DHODHQ02127 395 aa11.2□□□□□ -0.62
LIG1-208ENST00000595758 ZNF846Q147U1 533 aa11.2□□□□□ -0.62
LIG1-208ENST00000595758 H2BFWTQ7Z2G1 175 aa11.2□□□□□ -0.62
LIG1-208ENST00000595758 TMED4Q7Z7H5 227 aa11.2□□□□□ -0.62
LIG1-208ENST00000595758 ZNF695Q8IW36 515 aa11.2□□□□□ -0.62
LIG1-208ENST00000595758 KLHL30-AS1Q8NEE0 82 aa11.2□□□□□ -0.62
LIG1-208ENST00000595758 CASTOR1Q8WTX7 329 aa11.2□□□□□ -0.62
LIG1-208ENST00000595758 TMEM230Q96A57 120 aa11.2□□□□□ -0.62
LIG1-208ENST00000595758 MS4A10Q96PG2 267 aa11.2□□□□□ -0.62
LIG1-208ENST00000595758 TSC22D3Q99576 134 aa11.2□□□□□ -0.62
LIG1-208ENST00000595758 WDR12Q9GZL7 423 aaKnown RBP11.2□□□□□ -0.62
LIG1-208ENST00000595758 TMEM222Q9H0R3 208 aa11.2□□□□□ -0.62
LIG1-208ENST00000595758 ZNF355PQ9NSJ1 428 aa11.2□□□□□ -0.62
LIG1-208ENST00000595758 MGAM2Q2M2H8 2515 aa11.19□□□□□ -0.62
LIG1-208ENST00000595758 PKD1L1Q8TDX9 2849 aa11.19□□□□□ -0.62
LIG1-208ENST00000595758 TRRAPQ9Y4A5 3859 aa11.19□□□□□ -0.62
LIG1-208ENST00000595758 HMX3A6NHT5 357 aa11.19□□□□□ -0.62
LIG1-208ENST00000595758 TEX22C9J3V5 150 aa11.19□□□□□ -0.62
LIG1-208ENST00000595758 E7EUB6 86 aa11.19□□□□□ -0.62
LIG1-208ENST00000595758 OR9G9P0C7N8 305 aa11.19□□□□□ -0.62
LIG1-208ENST00000595758 SLC6A1P30531 599 aa11.19□□□□□ -0.62
LIG1-208ENST00000595758 CDX1P47902 265 aaPredicted RBP11.19□□□□□ -0.62
LIG1-208ENST00000595758 OR2B8PP59922 312 aa11.19□□□□□ -0.62
LIG1-208ENST00000595758 KIAA0141Q14154 515 aaPredicted RBP11.19□□□□□ -0.62
LIG1-208ENST00000595758 RBMS2Q15434 407 aaKnown RBP11.19□□□□□ -0.62
LIG1-208ENST00000595758 TREML4Q6UXN2 200 aa11.19□□□□□ -0.62
LIG1-208ENST00000595758 C18orf65Q6ZTR6 163 aa11.19□□□□□ -0.62
LIG1-208ENST00000595758 MYOZ3Q8TDC0 251 aa11.19□□□□□ -0.62
LIG1-208ENST00000595758 GLYATL2Q8WU03 294 aa11.19□□□□□ -0.62
LIG1-208ENST00000595758 UBE2E2Q96LR5 201 aa11.19□□□□□ -0.62
LIG1-208ENST00000595758 SLA2Q9H6Q3 261 aa11.19□□□□□ -0.62
LIG1-208ENST00000595758 COA4Q9NYJ1 87 aa11.19□□□□□ -0.62
LIG1-208ENST00000595758 PRNDQ9UKY0 176 aa11.19□□□□□ -0.62
LIG1-208ENST00000595758 NSG2Q9Y328 171 aa11.19□□□□□ -0.62
LIG1-208ENST00000595758 TEX50A0A1B0GTY4 177 aa11.18□□□□□ -0.62
LIG1-208ENST00000595758 A0A1B0GW64 132 aa11.18□□□□□ -0.62
LIG1-208ENST00000595758 H3BUA1 57 aa11.18□□□□□ -0.62
LIG1-208ENST00000595758 PLA2G10O15496 165 aa11.18□□□□□ -0.62
LIG1-208ENST00000595758 CDS2O95674 445 aa11.18□□□□□ -0.62
LIG1-208ENST00000595758 IGKV1-5P01602 117 aa11.18□□□□□ -0.62
LIG1-208ENST00000595758 AKR1C2P52895 323 aa11.18□□□□□ -0.62
LIG1-208ENST00000595758 TPPP2P59282 170 aa11.18□□□□□ -0.62
LIG1-208ENST00000595758 C8orf86Q6ZUL3 223 aa11.18□□□□□ -0.62
LIG1-208ENST00000595758 SLC25A42Q86VD7 318 aa11.18□□□□□ -0.62
LIG1-208ENST00000595758 TTC9CQ8N5M4 171 aa11.18□□□□□ -0.62
LIG1-208ENST00000595758 ZNF491Q8N8L2 437 aa11.18□□□□□ -0.62
LIG1-208ENST00000595758 OR1L8Q8NGR8 309 aa11.18□□□□□ -0.62
LIG1-208ENST00000595758 OR4A16Q8NH70 328 aa11.18□□□□□ -0.62
LIG1-208ENST00000595758 RRNAD1Q96FB5 475 aaKnown RBP11.18□□□□□ -0.62
LIG1-208ENST00000595758 GALNT14Q96FL9 552 aa11.18□□□□□ -0.62
LIG1-208ENST00000595758 FKBP11Q9NYL4 201 aa11.18□□□□□ -0.62
LIG1-208ENST00000595758 OR51B2Q9Y5P1 312 aa11.18□□□□□ -0.62
LIG1-208ENST00000595758 LYRM1O43325 122 aa11.17□□□□□ -0.62
LIG1-208ENST00000595758 NDUFB6O95139 128 aa11.17□□□□□ -0.62
LIG1-208ENST00000595758 BRI3O95415 125 aa11.17□□□□□ -0.62
LIG1-208ENST00000595758 TRGV3P03979 118 aa11.17□□□□□ -0.62
LIG1-208ENST00000595758 TRAPPC2P0DI81 140 aa11.17□□□□□ -0.62
LIG1-208ENST00000595758 TRAPPC2BP0DI82 140 aa11.17□□□□□ -0.62
LIG1-208ENST00000595758 ANXA3P12429 323 aa11.17□□□□□ -0.62
LIG1-208ENST00000595758 SUPT4H1P63272 117 aaKnown RBP11.17□□□□□ -0.62
LIG1-208ENST00000595758 SELENOHQ8IZQ5 122 aaKnown RBP11.17□□□□□ -0.62
LIG1-208ENST00000595758 CENPSQ8N2Z9 138 aa11.17□□□□□ -0.62
LIG1-208ENST00000595758 RNASE11Q8TAA1 199 aaKnown RBP11.17□□□□□ -0.62
LIG1-208ENST00000595758 LHFPL5Q8TAF8 219 aa11.17□□□□□ -0.62
LIG1-208ENST00000595758 TMEM56Q96MV1 263 aa11.17□□□□□ -0.62
LIG1-208ENST00000595758 QTRT1Q9BXR0 403 aaKnown RBP11.17□□□□□ -0.62
LIG1-208ENST00000595758 TMEM56-RWDD3S4R434 201 aa11.17□□□□□ -0.62
LIG1-208ENST00000595758 CGB1A6NKQ9 187 aa11.16□□□□□ -0.62
LIG1-208ENST00000595758 C15orf61A6NNL5 157 aa11.16□□□□□ -0.62
LIG1-208ENST00000595758 RBMXL2O75526 392 aaKnown RBP11.16□□□□□ -0.62
LIG1-208ENST00000595758 P0C879 139 aa11.16□□□□□ -0.62
LIG1-208ENST00000595758 AREGP15514 252 aa11.16□□□□□ -0.62
LIG1-208ENST00000595758 PSMB6P28072 239 aa11.16□□□□□ -0.62
LIG1-208ENST00000595758 BTCP35070 178 aa11.16□□□□□ -0.62
LIG1-208ENST00000595758 TMEM187Q14656 261 aa11.16□□□□□ -0.62
LIG1-208ENST00000595758 IZUMO4Q1ZYL8 232 aa11.16□□□□□ -0.62
LIG1-208ENST00000595758 TMEM128Q5BJH2 165 aa11.16□□□□□ -0.62
LIG1-208ENST00000595758 TMEM268Q5VZI3 342 aa11.16□□□□□ -0.62
LIG1-208ENST00000595758 THOC7Q6I9Y2 204 aaKnown RBP11.16□□□□□ -0.62
LIG1-208ENST00000595758 OR5B3Q8NH48 314 aa11.16□□□□□ -0.62
LIG1-208ENST00000595758 C4orf3Q8WVX3 66 aa11.16□□□□□ -0.62
LIG1-208ENST00000595758 RBPMSQ93062 196 aaKnown RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms