RNA–Protein interactions for RNA: ENST00000594965.1

GTF2F1-204, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-204ENST00000594965 FCAMRQ8WWV6 532 aa17.07■□□□□ 0.32
GTF2F1-204ENST00000594965 DGCR14Q96DF8 476 aaKnown RBP17.07■□□□□ 0.32
GTF2F1-204ENST00000594965 FANCD2OSQ96PS1 177 aa17.07■□□□□ 0.32
GTF2F1-204ENST00000594965 RSRP1Q9BUV0 290 aa17.07■□□□□ 0.32
GTF2F1-204ENST00000594965 KLK9Q9UKQ9 250 aa17.07■□□□□ 0.32
GTF2F1-204ENST00000594965 TPPPO94811 219 aa17.06■□□□□ 0.32
GTF2F1-204ENST00000594965 SPNP16150 400 aa17.06■□□□□ 0.32
GTF2F1-204ENST00000594965 CTRB1P17538 263 aa17.06■□□□□ 0.32
GTF2F1-204ENST00000594965 LPAR6P43657 344 aa17.06■□□□□ 0.32
GTF2F1-204ENST00000594965 UCP3P55916 312 aa17.06■□□□□ 0.32
GTF2F1-204ENST00000594965 PHLDA2Q53GA4 152 aa17.06■□□□□ 0.32
GTF2F1-204ENST00000594965 CTRB2Q6GPI1 263 aa17.06■□□□□ 0.32
GTF2F1-204ENST00000594965 IL34Q6ZMJ4 242 aa17.06■□□□□ 0.32
GTF2F1-204ENST00000594965 HAPLN4Q86UW8 402 aa17.06■□□□□ 0.32
GTF2F1-204ENST00000594965 LAX1Q8IWV1 398 aa17.06■□□□□ 0.32
GTF2F1-204ENST00000594965 DMBX1Q8NFW5 382 aa17.06■□□□□ 0.32
GTF2F1-204ENST00000594965 RAB2BQ8WUD1 216 aa17.06■□□□□ 0.32
GTF2F1-204ENST00000594965 OR4C12Q96R67 309 aa17.06■□□□□ 0.32
GTF2F1-204ENST00000594965 MTFP1Q9UDX5 166 aa17.06■□□□□ 0.32
GTF2F1-204ENST00000594965 DMRT1Q9Y5R6 373 aa17.06■□□□□ 0.32
GTF2F1-204ENST00000594965 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP17.05■□□□□ 0.32
GTF2F1-204ENST00000594965 BMPR1BO00238 502 aa17.05■□□□□ 0.32
GTF2F1-204ENST00000594965 TMBIM6P55061 237 aa17.05■□□□□ 0.32
GTF2F1-204ENST00000594965 SYNJ2BPP57105 145 aa17.05■□□□□ 0.32
GTF2F1-204ENST00000594965 DCTN2Q13561 401 aaKnown RBP17.05■□□□□ 0.32
GTF2F1-204ENST00000594965 C15orf32Q32M92 178 aa17.05■□□□□ 0.32
GTF2F1-204ENST00000594965 DYNC2LI1Q8TCX1 351 aa17.05■□□□□ 0.32
GTF2F1-204ENST00000594965 ELOVL1Q9BW60 279 aa17.05■□□□□ 0.32
GTF2F1-204ENST00000594965 COL7A1Q02388 2944 aa17.04■□□□□ 0.32
GTF2F1-204ENST00000594965 DPPA5A6NC42 116 aa17.04■□□□□ 0.32
GTF2F1-204ENST00000594965 NDUFB8O95169 186 aa17.04■□□□□ 0.32
GTF2F1-204ENST00000594965 LY86O95711 162 aa17.04■□□□□ 0.32
GTF2F1-204ENST00000594965 REG1AP05451 166 aa17.04■□□□□ 0.32
GTF2F1-204ENST00000594965 FGF2P09038 288 aa17.04■□□□□ 0.32
GTF2F1-204ENST00000594965 RPL5P46777 297 aaKnown RBP17.04■□□□□ 0.32
GTF2F1-204ENST00000594965 CD69Q07108 199 aa17.04■□□□□ 0.32
GTF2F1-204ENST00000594965 C11orf87Q6NUJ2 197 aa17.04■□□□□ 0.32
GTF2F1-204ENST00000594965 LPCAT3Q6P1A2 487 aa17.04■□□□□ 0.32
GTF2F1-204ENST00000594965 LHFPL1Q86WI0 220 aa17.04■□□□□ 0.32
GTF2F1-204ENST00000594965 OR9G4Q8NGQ1 327 aa17.04■□□□□ 0.32
GTF2F1-204ENST00000594965 OR6Q1Q8NGQ2 317 aa17.04■□□□□ 0.32
GTF2F1-204ENST00000594965 BCL7BQ9BQE9 202 aa17.04■□□□□ 0.32
GTF2F1-204ENST00000594965 FBXL7Q9UJT9 491 aa17.04■□□□□ 0.32
GTF2F1-204ENST00000594965 IGLC7A0M8Q6 106 aa17.03■□□□□ 0.32
GTF2F1-204ENST00000594965 MARCH11A6NNE9 402 aa17.03■□□□□ 0.32
GTF2F1-204ENST00000594965 RGS5O15539 181 aa17.03■□□□□ 0.32
GTF2F1-204ENST00000594965 IGLV1-51P01701 117 aa17.03■□□□□ 0.32
GTF2F1-204ENST00000594965 CD3DP04234 171 aa17.03■□□□□ 0.32
GTF2F1-204ENST00000594965 GP9P14770 177 aa17.03■□□□□ 0.32
GTF2F1-204ENST00000594965 TBC1D26Q86UD7 250 aa17.03■□□□□ 0.32
GTF2F1-204ENST00000594965 KRASP01116 189 aa17.02■□□□□ 0.32
GTF2F1-204ENST00000594965 G6PCP35575 357 aa17.02■□□□□ 0.32
GTF2F1-204ENST00000594965 RPEL1Q2QD12 228 aa17.02■□□□□ 0.32
GTF2F1-204ENST00000594965 SLC38A6Q8IZM9 456 aa17.02■□□□□ 0.32
GTF2F1-204ENST00000594965 CADM3Q8N126 398 aa17.02■□□□□ 0.32
GTF2F1-204ENST00000594965 OR4D10Q8NGI6 311 aa17.02■□□□□ 0.32
GTF2F1-204ENST00000594965 COMMD5Q9GZQ3 224 aa17.02■□□□□ 0.32
GTF2F1-204ENST00000594965 CCDC59Q9P031 241 aaKnown RBP17.02■□□□□ 0.32
GTF2F1-204ENST00000594965 IGLV11-55A0A075B6I3 123 aa17.01■□□□□ 0.31
GTF2F1-204ENST00000594965 TEX50A0A1B0GTY4 177 aa17.01■□□□□ 0.31
GTF2F1-204ENST00000594965 PPP5D1E7EU14 171 aa17.01■□□□□ 0.31
GTF2F1-204ENST00000594965 CSN3P07498 182 aa17.01■□□□□ 0.31
GTF2F1-204ENST00000594965 ERVK-16P61578 105 aa17.01■□□□□ 0.31
GTF2F1-204ENST00000594965 RNASE10Q5GAN6 216 aaKnown RBP17.01■□□□□ 0.31
GTF2F1-204ENST00000594965 OR10W1Q8NGF6 305 aa17.01■□□□□ 0.31
GTF2F1-204ENST00000594965 C15orf40Q8WUR7 153 aa17.01■□□□□ 0.31
GTF2F1-204ENST00000594965 CCDC140Q96MF4 163 aa17.01■□□□□ 0.31
GTF2F1-204ENST00000594965 FAM212BQ9NTI7 297 aaPredicted RBP17.01■□□□□ 0.31
GTF2F1-204ENST00000594965 S4R3C0 116 aa17.01■□□□□ 0.31
GTF2F1-204ENST00000594965 GABARAPH6UMI1 98 aa17■□□□□ 0.31
GTF2F1-204ENST00000594965 IGKV1-39P01597 117 aa17■□□□□ 0.31
GTF2F1-204ENST00000594965 IGHV3-23P01764 117 aa17■□□□□ 0.31
GTF2F1-204ENST00000594965 CD74P04233 296 aa17■□□□□ 0.31
GTF2F1-204ENST00000594965 IGKV1D-39P04432 117 aa17■□□□□ 0.31
GTF2F1-204ENST00000594965 TMEM229BQ8NBD8 167 aa17■□□□□ 0.31
GTF2F1-204ENST00000594965 SRSF8Q9BRL6 282 aaKnown RBP17■□□□□ 0.31
GTF2F1-204ENST00000594965 QTRT1Q9BXR0 403 aaKnown RBP17■□□□□ 0.31
GTF2F1-204ENST00000594965 NSG2Q9Y328 171 aa17■□□□□ 0.31
GTF2F1-204ENST00000594965 H3BMQ9 156 aa16.99■□□□□ 0.31
GTF2F1-204ENST00000594965 DHFRP00374 187 aa16.99■□□□□ 0.31
GTF2F1-204ENST00000594965 IFNA6P05013 189 aa16.99■□□□□ 0.31
GTF2F1-204ENST00000594965 HIST1H1BP16401 226 aaKnown RBP16.99■□□□□ 0.31
GTF2F1-204ENST00000594965 TBPP20226 339 aa16.99■□□□□ 0.31
GTF2F1-204ENST00000594965 PTBP1P26599 531 aaKnown RBP eCLIP16.99■□□□□ 0.31
GTF2F1-204ENST00000594965 ARRDC1Q8N5I2 433 aa16.99■□□□□ 0.31
GTF2F1-204ENST00000594965 NDUFA4L2Q9NRX3 87 aa16.99■□□□□ 0.31
GTF2F1-204ENST00000594965 DBX1A6NMT0 343 aa16.98■□□□□ 0.31
GTF2F1-204ENST00000594965 TRAPPC2P0DI81 140 aa16.98■□□□□ 0.31
GTF2F1-204ENST00000594965 TRAPPC2BP0DI82 140 aa16.98■□□□□ 0.31
GTF2F1-204ENST00000594965 DEFA4P12838 97 aa16.98■□□□□ 0.31
GTF2F1-204ENST00000594965 S100GP29377 79 aa16.98■□□□□ 0.31
GTF2F1-204ENST00000594965 TAS2R19P59542 299 aa16.98■□□□□ 0.31
GTF2F1-204ENST00000594965 RND3P61587 244 aa16.98■□□□□ 0.31
GTF2F1-204ENST00000594965 WT1-ASQ06250 92 aa16.98■□□□□ 0.31
GTF2F1-204ENST00000594965 TATDN3Q17R31 274 aa16.98■□□□□ 0.31
GTF2F1-204ENST00000594965 THOC7Q6I9Y2 204 aaKnown RBP16.98■□□□□ 0.31
GTF2F1-204ENST00000594965 OR1L8Q8NGR8 309 aa16.98■□□□□ 0.31
GTF2F1-204ENST00000594965 ISOC1Q96CN7 298 aa16.98■□□□□ 0.31
GTF2F1-204ENST00000594965 SEC22AQ96IW7 307 aa16.98■□□□□ 0.31
GTF2F1-204ENST00000594965 SLIRPQ9GZT3 109 aaKnown RBP16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms