RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 POLR2GP62487 172 aaKnown RBP eCLIP15.8■□□□□ 0.12
LSM4-203ENST00000593829 HTD2P86397 168 aa15.8■□□□□ 0.12
LSM4-203ENST00000593829 ETV3LQ6ZN32 361 aa15.8■□□□□ 0.12
LSM4-203ENST00000593829 C5orf24Q7Z6I8 188 aa15.8■□□□□ 0.12
LSM4-203ENST00000593829 OR10X1Q8NGY0 326 aa15.8■□□□□ 0.12
LSM4-203ENST00000593829 ZNF2Q9BSG1 426 aaPredicted RBP15.8■□□□□ 0.12
LSM4-203ENST00000593829 Q9N2K0 584 aa15.8■□□□□ 0.12
LSM4-203ENST00000593829 COL6A5A8TX70 2615 aa15.8■□□□□ 0.12
LSM4-203ENST00000593829 A0A1W2PPE3 182 aa15.8■□□□□ 0.12
LSM4-203ENST00000593829 FAM181BA6NEQ2 426 aa15.8■□□□□ 0.12
LSM4-203ENST00000593829 LY6LH3BQJ8 138 aa15.8■□□□□ 0.12
LSM4-203ENST00000593829 FAM53AQ6NSI3 398 aaPredicted RBP15.8■□□□□ 0.12
LSM4-203ENST00000593829 SLC16A13Q7RTY0 426 aa15.8■□□□□ 0.12
LSM4-203ENST00000593829 LINC00311Q8N616 119 aa15.8■□□□□ 0.12
LSM4-203ENST00000593829 OR10V1Q8NGI7 309 aa15.8■□□□□ 0.12
LSM4-203ENST00000593829 TCTEX1D2Q8WW35 142 aa15.8■□□□□ 0.12
LSM4-203ENST00000593829 PBDC1Q9BVG4 233 aa15.8■□□□□ 0.12
LSM4-203ENST00000593829 JPT1Q9UK76 154 aa15.8■□□□□ 0.12
LSM4-203ENST00000593829 KCNIP3Q9Y2W7 256 aa15.8■□□□□ 0.12
LSM4-203ENST00000593829 FABP9Q0Z7S8 132 aa15.79■□□□□ 0.12
LSM4-203ENST00000593829 TPTE2P1Q5T6R2 138 aa15.79■□□□□ 0.12
LSM4-203ENST00000593829 FOXRED2Q8IWF2 684 aa15.79■□□□□ 0.12
LSM4-203ENST00000593829 OR52L2PQ8NGH6 319 aa15.79■□□□□ 0.12
LSM4-203ENST00000593829 IL1F10Q8WWZ1 152 aa15.79■□□□□ 0.12
LSM4-203ENST00000593829 ANXA10Q9UJ72 324 aa15.79■□□□□ 0.12
LSM4-203ENST00000593829 OOSP1A8MZH6 123 aa15.78■□□□□ 0.12
LSM4-203ENST00000593829 SNRNP70P08621 437 aaKnown RBP15.78■□□□□ 0.12
LSM4-203ENST00000593829 DTYMKP23919 212 aa15.78■□□□□ 0.12
LSM4-203ENST00000593829 DYNLT3P51808 116 aa15.78■□□□□ 0.12
LSM4-203ENST00000593829 HLA-DRB3P79483 266 aa15.78■□□□□ 0.12
LSM4-203ENST00000593829 TMEM187Q14656 261 aa15.78■□□□□ 0.12
LSM4-203ENST00000593829 CCDC144NLQ6NUI1 221 aa15.78■□□□□ 0.12
LSM4-203ENST00000593829 LINC00469Q8N7U9 141 aa15.78■□□□□ 0.12
LSM4-203ENST00000593829 PIFOQ8TCI5 191 aa15.78■□□□□ 0.12
LSM4-203ENST00000593829 RPEQ96AT9 228 aa15.78■□□□□ 0.12
LSM4-203ENST00000593829 SLC35B3Q9H1N7 401 aa15.78■□□□□ 0.12
LSM4-203ENST00000593829 NAA60Q9H7X0 242 aa15.78■□□□□ 0.12
LSM4-203ENST00000593829 NIT2Q9NQR4 276 aa15.78■□□□□ 0.12
LSM4-203ENST00000593829 LSM5Q9Y4Y9 91 aaKnown RBP15.78■□□□□ 0.12
LSM4-203ENST00000593829 AP4M1O00189 453 aa15.78■□□□□ 0.12
LSM4-203ENST00000593829 MBPP02686 304 aaPredicted RBP15.78■□□□□ 0.12
LSM4-203ENST00000593829 OR8U8P0C7N1 319 aa15.78■□□□□ 0.12
LSM4-203ENST00000593829 RPL15P61313 204 aaKnown RBP15.78■□□□□ 0.12
LSM4-203ENST00000593829 MORN2Q502X0 79 aa15.78■□□□□ 0.12
LSM4-203ENST00000593829 ZNF439Q8NDP4 499 aa15.78■□□□□ 0.12
LSM4-203ENST00000593829 YPEL4Q96NS1 127 aa15.78■□□□□ 0.12
LSM4-203ENST00000593829 IGKV1D-8A0A087WSZ0 117 aa15.77■□□□□ 0.12
LSM4-203ENST00000593829 YPEL1O60688 119 aa15.77■□□□□ 0.12
LSM4-203ENST00000593829 PPP1CCP36873 323 aaKnown RBP15.77■□□□□ 0.12
LSM4-203ENST00000593829 CAMLGP49069 296 aa15.77■□□□□ 0.12
LSM4-203ENST00000593829 GNMTQ14749 295 aa15.77■□□□□ 0.12
LSM4-203ENST00000593829 LY6EQ16553 131 aa15.77■□□□□ 0.12
LSM4-203ENST00000593829 SLC25A48Q6ZT89 311 aaKnown RBP15.77■□□□□ 0.12
LSM4-203ENST00000593829 MAFIPQ8WZ33 124 aa15.77■□□□□ 0.12
LSM4-203ENST00000593829 TOMM40LQ969M1 308 aa15.77■□□□□ 0.12
LSM4-203ENST00000593829 YPEL2Q96QA6 119 aa15.77■□□□□ 0.12
LSM4-203ENST00000593829 TMPRSS5Q9H3S3 457 aa15.77■□□□□ 0.12
LSM4-203ENST00000593829 TRDCB7Z8K6 153 aa15.76■□□□□ 0.11
LSM4-203ENST00000593829 IL3RAP26951 378 aa15.76■□□□□ 0.11
LSM4-203ENST00000593829 BRS3P32247 399 aa15.76■□□□□ 0.11
LSM4-203ENST00000593829 SULT1A1P50225 295 aa15.76■□□□□ 0.11
LSM4-203ENST00000593829 ZNF134P52741 427 aa15.76■□□□□ 0.11
LSM4-203ENST00000593829 SMIM3Q9BZL3 60 aa15.76■□□□□ 0.11
LSM4-203ENST00000593829 WFDC1Q9HC57 220 aa15.76■□□□□ 0.11
LSM4-203ENST00000593829 NECAP2Q9NVZ3 263 aa15.76■□□□□ 0.11
LSM4-203ENST00000593829 TMEM89A2RUT3 159 aa15.76■□□□□ 0.11
LSM4-203ENST00000593829 UMAD1C9J7I0 102 aa15.76■□□□□ 0.11
LSM4-203ENST00000593829 SLC31A2O15432 143 aa15.76■□□□□ 0.11
LSM4-203ENST00000593829 SCTP09683 121 aa15.76■□□□□ 0.11
LSM4-203ENST00000593829 OR5H8P0DN80 308 aa15.76■□□□□ 0.11
LSM4-203ENST00000593829 AKR1C3P42330 323 aa15.76■□□□□ 0.11
LSM4-203ENST00000593829 KIR2DS4P43632 304 aa15.76■□□□□ 0.11
LSM4-203ENST00000593829 KIR2DS1Q14954 304 aa15.76■□□□□ 0.11
LSM4-203ENST00000593829 CT45A1Q5HYN5 189 aa15.76■□□□□ 0.11
LSM4-203ENST00000593829 CT45A3Q8NHU0 189 aa15.76■□□□□ 0.11
LSM4-203ENST00000593829 M0R036 132 aa15.75■□□□□ 0.11
LSM4-203ENST00000593829 IFNA17P01571 189 aa15.75■□□□□ 0.11
LSM4-203ENST00000593829 RAB7AP51149 207 aa15.75■□□□□ 0.11
LSM4-203ENST00000593829 UCP3P55916 312 aa15.75■□□□□ 0.11
LSM4-203ENST00000593829 CLINT1Q14677 625 aa15.75■□□□□ 0.11
LSM4-203ENST00000593829 FAM209BQ5JX69 171 aa15.75■□□□□ 0.11
LSM4-203ENST00000593829 LIAT1Q6ZQX7 453 aa15.75■□□□□ 0.11
LSM4-203ENST00000593829 EIF5A2Q9GZV4 153 aaKnown RBP15.75■□□□□ 0.11
LSM4-203ENST00000593829 TCF19Q9Y242 345 aa15.75■□□□□ 0.11
LSM4-203ENST00000593829 PIGPP57054 158 aa15.74■□□□□ 0.11
LSM4-203ENST00000593829 ZNF616Q08AN1 781 aa15.74■□□□□ 0.11
LSM4-203ENST00000593829 SRSF7Q16629 238 aaKnown RBP eCLIP15.74■□□□□ 0.11
LSM4-203ENST00000593829 AKIRIN2Q53H80 203 aa15.74■□□□□ 0.11
LSM4-203ENST00000593829 ABHD14AQ9BUJ0 271 aa15.74■□□□□ 0.11
LSM4-203ENST00000593829 PITPNC1Q9UKF7 332 aa15.74■□□□□ 0.11
LSM4-203ENST00000593829 HSPA12AO43301 675 aa15.74■□□□□ 0.11
LSM4-203ENST00000593829 GATCO43716 136 aaKnown RBP15.74■□□□□ 0.11
LSM4-203ENST00000593829 CLN5O75503 358 aa15.74■□□□□ 0.11
LSM4-203ENST00000593829 DIAPH2-AS1Q14236 149 aa15.74■□□□□ 0.11
LSM4-203ENST00000593829 C1RLQ9NZP8 487 aa15.74■□□□□ 0.11
LSM4-203ENST00000593829 HSD17B6O14756 317 aa15.73■□□□□ 0.11
LSM4-203ENST00000593829 ZNF816Q0VGE8 651 aaPredicted RBP15.73■□□□□ 0.11
LSM4-203ENST00000593829 FOXL1Q12952 345 aa15.73■□□□□ 0.11
LSM4-203ENST00000593829 Q6ZS49 121 aa15.73■□□□□ 0.11
LSM4-203ENST00000593829 LGI3Q8N145 548 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms