RNA–Protein interactions for RNA: ENST00000592604.5

SMARCA4-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best)

Gene SMARCA4, Length 2,940 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-219ENST00000592604 TMEM108Q6UXF1 575 aa12.3□□□□□ -0.44
SMARCA4-219ENST00000592604 C11orf52Q96A22 123 aa12.3□□□□□ -0.44
SMARCA4-219ENST00000592604 C20orf144Q9BQM9 153 aa12.3□□□□□ -0.44
SMARCA4-219ENST00000592604 NPVFQ9HCQ7 196 aa12.3□□□□□ -0.44
SMARCA4-219ENST00000592604 GRIFINA4D1Z8 144 aa12.29□□□□□ -0.44
SMARCA4-219ENST00000592604 C9JCJ5 164 aa12.29□□□□□ -0.44
SMARCA4-219ENST00000592604 GCHFRP30047 84 aa12.29□□□□□ -0.44
SMARCA4-219ENST00000592604 ZNF90Q03938 601 aa12.29□□□□□ -0.44
SMARCA4-219ENST00000592604 TEX43Q6ZNM6 134 aa12.29□□□□□ -0.44
SMARCA4-219ENST00000592604 Q6ZWC4 215 aa12.29□□□□□ -0.44
SMARCA4-219ENST00000592604 FAM90A1Q86YD7 464 aa12.29□□□□□ -0.44
SMARCA4-219ENST00000592604 DCTN5Q9BTE1 182 aa12.29□□□□□ -0.44
SMARCA4-219ENST00000592604 GSX1Q9H4S2 264 aaPredicted RBP12.29□□□□□ -0.44
SMARCA4-219ENST00000592604 K7EN84 100 aa12.29□□□□□ -0.44
SMARCA4-219ENST00000592604 M0QZK8 103 aa12.29□□□□□ -0.44
SMARCA4-219ENST00000592604 LYZL6O75951 148 aa12.29□□□□□ -0.44
SMARCA4-219ENST00000592604 RPL31P62899 125 aaKnown RBP12.29□□□□□ -0.44
SMARCA4-219ENST00000592604 MORN2Q502X0 79 aa12.29□□□□□ -0.44
SMARCA4-219ENST00000592604 CD177Q8N6Q3 437 aa12.29□□□□□ -0.44
SMARCA4-219ENST00000592604 TRGV10A0A0A0MS01 117 aa12.28□□□□□ -0.44
SMARCA4-219ENST00000592604 A0A1W2PNU3 283 aaPredicted RBP12.28□□□□□ -0.44
SMARCA4-219ENST00000592604 NDUFS8O00217 210 aa12.28□□□□□ -0.44
SMARCA4-219ENST00000592604 LAMTOR5O43504 91 aa12.28□□□□□ -0.44
SMARCA4-219ENST00000592604 TNFSF13O75888 250 aa12.28□□□□□ -0.44
SMARCA4-219ENST00000592604 CRISP2P16562 243 aa12.28□□□□□ -0.44
SMARCA4-219ENST00000592604 CBLN1P23435 193 aa12.28□□□□□ -0.44
SMARCA4-219ENST00000592604 RNFT1Q5M7Z0 435 aa12.28□□□□□ -0.44
SMARCA4-219ENST00000592604 TPTE2P1Q5T6R2 138 aa12.28□□□□□ -0.44
SMARCA4-219ENST00000592604 ABHD12Q8N2K0 398 aa12.28□□□□□ -0.44
SMARCA4-219ENST00000592604 MRPL18Q9H0U6 180 aaKnown RBP12.28□□□□□ -0.44
SMARCA4-219ENST00000592604 JPT1Q9UK76 154 aa12.28□□□□□ -0.44
SMARCA4-219ENST00000592604 TRGV8A0A0C4DH27 118 aa12.28□□□□□ -0.44
SMARCA4-219ENST00000592604 IL6RP08887 468 aaPredicted RBP12.28□□□□□ -0.44
SMARCA4-219ENST00000592604 THBS3P49746 956 aa12.28□□□□□ -0.44
SMARCA4-219ENST00000592604 LGALS4P56470 323 aa12.28□□□□□ -0.44
SMARCA4-219ENST00000592604 RANP62826 216 aaKnown RBP12.28□□□□□ -0.44
SMARCA4-219ENST00000592604 HLA-DRB5Q30154 266 aa12.28□□□□□ -0.44
SMARCA4-219ENST00000592604 FRYQ5TBA9 3013 aa12.28□□□□□ -0.44
SMARCA4-219ENST00000592604 IGKV3-15P01624 115 aa12.27□□□□□ -0.44
SMARCA4-219ENST00000592604 ERVK-16P61578 105 aa12.27□□□□□ -0.44
SMARCA4-219ENST00000592604 RHOBP62745 196 aa12.27□□□□□ -0.44
SMARCA4-219ENST00000592604 Q0VG73 95 aa12.27□□□□□ -0.44
SMARCA4-219ENST00000592604 EFNB3Q15768 340 aa12.27□□□□□ -0.44
SMARCA4-219ENST00000592604 CR1LQ2VPA4 569 aa12.27□□□□□ -0.44
SMARCA4-219ENST00000592604 TUBG2Q9NRH3 451 aa12.27□□□□□ -0.44
SMARCA4-219ENST00000592604 TRAV3A0A0B4J244 114 aa12.27□□□□□ -0.45
SMARCA4-219ENST00000592604 AREGP15514 252 aa12.27□□□□□ -0.45
SMARCA4-219ENST00000592604 CDX2Q99626 313 aaPredicted RBP12.27□□□□□ -0.45
SMARCA4-219ENST00000592604 TCF19Q9Y242 345 aa12.27□□□□□ -0.45
SMARCA4-219ENST00000592604 M0R1X1 148 aa12.27□□□□□ -0.45
SMARCA4-219ENST00000592604 SERF1AO75920 110 aa12.27□□□□□ -0.45
SMARCA4-219ENST00000592604 MT-CO2P00403 227 aa12.27□□□□□ -0.45
SMARCA4-219ENST00000592604 TOMM20LQ6UXN7 152 aa12.27□□□□□ -0.45
SMARCA4-219ENST00000592604 Q6ZT83 130 aa12.27□□□□□ -0.45
SMARCA4-219ENST00000592604 TMPRSS7Q7RTY8 843 aa12.27□□□□□ -0.45
SMARCA4-219ENST00000592604 VKORC1L1Q8N0U8 176 aa12.27□□□□□ -0.45
SMARCA4-219ENST00000592604 SSMEM1Q8WWF3 244 aa12.27□□□□□ -0.45
SMARCA4-219ENST00000592604 EAF1Q96JC9 268 aaPredicted RBP12.27□□□□□ -0.45
SMARCA4-219ENST00000592604 SLC17A3O00476 420 aa12.26□□□□□ -0.45
SMARCA4-219ENST00000592604 SIAH2O43255 324 aa12.26□□□□□ -0.45
SMARCA4-219ENST00000592604 PRDX2P32119 198 aa12.26□□□□□ -0.45
SMARCA4-219ENST00000592604 RPL29P47914 159 aaKnown RBP12.26□□□□□ -0.45
SMARCA4-219ENST00000592604 LTC4SQ16873 150 aa12.26□□□□□ -0.45
SMARCA4-219ENST00000592604 TEPPQ6URK8 271 aa12.26□□□□□ -0.45
SMARCA4-219ENST00000592604 LHFPL4Q7Z7J7 247 aa12.26□□□□□ -0.45
SMARCA4-219ENST00000592604 UHRF2Q96PU4 802 aa12.26□□□□□ -0.45
SMARCA4-219ENST00000592604 MIEN1Q9BRT3 115 aa12.26□□□□□ -0.45
SMARCA4-219ENST00000592604 TMEM140Q9NV12 185 aa12.26□□□□□ -0.45
SMARCA4-219ENST00000592604 GNG12Q9UBI6 72 aa12.26□□□□□ -0.45
SMARCA4-219ENST00000592604 DMDP11532 3685 aa12.26□□□□□ -0.45
SMARCA4-219ENST00000592604 TRBV9A0A0B4J1U6 114 aa12.26□□□□□ -0.45
SMARCA4-219ENST00000592604 TIMM8AO60220 97 aaPredicted RBP12.26□□□□□ -0.45
SMARCA4-219ENST00000592604 CD33P20138 364 aa12.26□□□□□ -0.45
SMARCA4-219ENST00000592604 KIR2DS2P43631 304 aa12.26□□□□□ -0.45
SMARCA4-219ENST00000592604 KRTCAP3Q53RY4 240 aa12.26□□□□□ -0.45
SMARCA4-219ENST00000592604 TMEM164Q5U3C3 297 aa12.26□□□□□ -0.45
SMARCA4-219ENST00000592604 STPG3Q8N7X2 389 aa12.26□□□□□ -0.45
SMARCA4-219ENST00000592604 ARL2-SNX15V9GYD0 113 aa12.26□□□□□ -0.45
SMARCA4-219ENST00000592604 C22orf46C9J442 243 aa12.25□□□□□ -0.45
SMARCA4-219ENST00000592604 ZNF883P0CG24 379 aa12.25□□□□□ -0.45
SMARCA4-219ENST00000592604 TNFSF10P50591 281 aa12.25□□□□□ -0.45
SMARCA4-219ENST00000592604 LOXL3P58215 753 aa12.25□□□□□ -0.45
SMARCA4-219ENST00000592604 EDDM3AQ14507 147 aa12.25□□□□□ -0.45
SMARCA4-219ENST00000592604 RPL39P5Q59GN2 51 aa12.25□□□□□ -0.45
SMARCA4-219ENST00000592604 SPATA31B1PQ5VZV4 182 aa12.25□□□□□ -0.45
SMARCA4-219ENST00000592604 ZNF705AQ6ZN79 300 aaPredicted RBP12.25□□□□□ -0.45
SMARCA4-219ENST00000592604 OR1L6Q8NGR2 347 aa12.25□□□□□ -0.45
SMARCA4-219ENST00000592604 DDB2Q92466 427 aa12.25□□□□□ -0.45
SMARCA4-219ENST00000592604 FER1L6-AS2Q96M78 137 aa12.25□□□□□ -0.45
SMARCA4-219ENST00000592604 S1PR3Q99500 378 aa12.25□□□□□ -0.45
SMARCA4-219ENST00000592604 HSPB9Q9BQS6 159 aa12.25□□□□□ -0.45
SMARCA4-219ENST00000592604 AHRRA9YTQ3 701 aa12.25□□□□□ -0.45
SMARCA4-219ENST00000592604 ARG2P78540 354 aa12.25□□□□□ -0.45
SMARCA4-219ENST00000592604 RPEL1Q2QD12 228 aa12.25□□□□□ -0.45
SMARCA4-219ENST00000592604 TDRG1Q3Y452 100 aa12.25□□□□□ -0.45
SMARCA4-219ENST00000592604 OR5AU1Q8NGC0 362 aa12.25□□□□□ -0.45
SMARCA4-219ENST00000592604 LRRC29Q8WV35 223 aa12.25□□□□□ -0.45
SMARCA4-219ENST00000592604 GNB1LQ9BYB4 327 aa12.25□□□□□ -0.45
SMARCA4-219ENST00000592604 IFI27L2Q9H2X8 130 aa12.25□□□□□ -0.45
SMARCA4-219ENST00000592604 MSL2Q9HCI7 577 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms