RNA–Protein interactions for RNA: ENST00000589940.5

CXXC1-212, Transcript of CXXC finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene CXXC1, Length 2,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-212ENST00000589940 HNF4GQ14541 408 aa13.97□□□□□ -0.17
CXXC1-212ENST00000589940 OR2C3Q8N628 320 aa13.97□□□□□ -0.17
CXXC1-212ENST00000589940 DTD1Q8TEA8 209 aa13.97□□□□□ -0.17
CXXC1-212ENST00000589940 CEBPZOSA8MTT3 80 aa13.96□□□□□ -0.17
CXXC1-212ENST00000589940 CRYGBP07316 175 aa13.96□□□□□ -0.17
CXXC1-212ENST00000589940 FAM106CPP0CH98 169 aa13.96□□□□□ -0.17
CXXC1-212ENST00000589940 CAV2P51636 162 aa13.96□□□□□ -0.17
CXXC1-212ENST00000589940 BPIFB3P59826 476 aa13.96□□□□□ -0.17
CXXC1-212ENST00000589940 RPL23AP62750 156 aaKnown RBP13.96□□□□□ -0.17
CXXC1-212ENST00000589940 MMDQ15546 238 aa13.96□□□□□ -0.17
CXXC1-212ENST00000589940 THNSL2Q86YJ6 484 aa13.96□□□□□ -0.17
CXXC1-212ENST00000589940 ZDHHC16Q969W1 377 aa13.96□□□□□ -0.17
CXXC1-212ENST00000589940 SMIM8Q96KF7 97 aa13.96□□□□□ -0.17
CXXC1-212ENST00000589940 ZNF430Q9H8G1 570 aaPredicted RBP13.96□□□□□ -0.17
CXXC1-212ENST00000589940 TPSG1Q9NRR2 321 aa13.96□□□□□ -0.17
CXXC1-212ENST00000589940 TCF19Q9Y242 345 aa13.96□□□□□ -0.17
CXXC1-212ENST00000589940 SIGLEC9Q9Y336 463 aa13.96□□□□□ -0.17
CXXC1-212ENST00000589940 FBLN7Q53RD9 439 aa13.96□□□□□ -0.17
CXXC1-212ENST00000589940 SPINK9Q5DT21 86 aa13.96□□□□□ -0.17
CXXC1-212ENST00000589940 Q8N6K4 173 aa13.96□□□□□ -0.17
CXXC1-212ENST00000589940 NPBQ8NG41 125 aa13.96□□□□□ -0.17
CXXC1-212ENST00000589940 OR5B3Q8NH48 314 aa13.96□□□□□ -0.17
CXXC1-212ENST00000589940 CIB3Q96Q77 187 aaPredicted RBP13.96□□□□□ -0.17
CXXC1-212ENST00000589940 MEGF9Q9H1U4 602 aa13.96□□□□□ -0.17
CXXC1-212ENST00000589940 ZC4H2Q9NQZ6 224 aa13.96□□□□□ -0.17
CXXC1-212ENST00000589940 METTL1Q9UBP6 276 aaKnown RBP13.96□□□□□ -0.17
CXXC1-212ENST00000589940 FAM96BQ9Y3D0 163 aa13.96□□□□□ -0.17
CXXC1-212ENST00000589940 CSPG4Q6UVK1 2322 aa13.96□□□□□ -0.17
CXXC1-212ENST00000589940 MYO9AB2RTY4 2548 aa13.96□□□□□ -0.17
CXXC1-212ENST00000589940 TNCP24821 2201 aa13.96□□□□□ -0.18
CXXC1-212ENST00000589940 NBR2O15453 112 aa13.95□□□□□ -0.18
CXXC1-212ENST00000589940 MYOD1P15172 320 aa13.95□□□□□ -0.18
CXXC1-212ENST00000589940 F2RL1P55085 397 aa13.95□□□□□ -0.18
CXXC1-212ENST00000589940 COMMD5Q9GZQ3 224 aa13.95□□□□□ -0.18
CXXC1-212ENST00000589940 PSENENQ9NZ42 101 aa13.95□□□□□ -0.18
CXXC1-212ENST00000589940 ITGB1BP2Q9UKP3 347 aa13.95□□□□□ -0.18
CXXC1-212ENST00000589940 FAM24AA6NFZ4 105 aa13.95□□□□□ -0.18
CXXC1-212ENST00000589940 RRHO14718 337 aa13.95□□□□□ -0.18
CXXC1-212ENST00000589940 TSC22D2O75157 780 aa13.95□□□□□ -0.18
CXXC1-212ENST00000589940 NDUFA3O95167 84 aa13.95□□□□□ -0.18
CXXC1-212ENST00000589940 DYNLT3P51808 116 aa13.95□□□□□ -0.18
CXXC1-212ENST00000589940 OPCMLQ14982 345 aa13.95□□□□□ -0.18
CXXC1-212ENST00000589940 PRSS8Q16651 343 aa13.95□□□□□ -0.18
CXXC1-212ENST00000589940 MRGPRG-AS1Q2M3A8 158 aa13.95□□□□□ -0.18
CXXC1-212ENST00000589940 FAM120AOSQ5T036 256 aa13.95□□□□□ -0.18
CXXC1-212ENST00000589940 PPP1R27Q86WC6 154 aa13.95□□□□□ -0.18
CXXC1-212ENST00000589940 MMD2Q8IY49 270 aa13.95□□□□□ -0.18
CXXC1-212ENST00000589940 SLC25A31Q9H0C2 315 aa13.95□□□□□ -0.18
CXXC1-212ENST00000589940 FBXL15Q9H469 300 aa13.95□□□□□ -0.18
CXXC1-212ENST00000589940 TEX50A0A1B0GTY4 177 aa13.94□□□□□ -0.18
CXXC1-212ENST00000589940 H3BP45 60 aa13.94□□□□□ -0.18
CXXC1-212ENST00000589940 LY86O95711 162 aa13.94□□□□□ -0.18
CXXC1-212ENST00000589940 FSHBP01225 129 aa13.94□□□□□ -0.18
CXXC1-212ENST00000589940 FBP1P09467 338 aa13.94□□□□□ -0.18
CXXC1-212ENST00000589940 TMEM11P17152 192 aa13.94□□□□□ -0.18
CXXC1-212ENST00000589940 PRCDQ00LT1 54 aa13.94□□□□□ -0.18
CXXC1-212ENST00000589940 PJVKQ0ZLH3 352 aa13.94□□□□□ -0.18
CXXC1-212ENST00000589940 TMEM252Q8N6L7 170 aa13.94□□□□□ -0.18
CXXC1-212ENST00000589940 NANPQ8TBE9 248 aa13.94□□□□□ -0.18
CXXC1-212ENST00000589940 KIAA1456Q9P272 454 aa13.94□□□□□ -0.18
CXXC1-212ENST00000589940 FLNBO75369 2602 aaKnown RBP13.94□□□□□ -0.18
CXXC1-212ENST00000589940 KANTRA0A1W2PQU2 76 aa13.94□□□□□ -0.18
CXXC1-212ENST00000589940 IGSF23A1L1A6 192 aa13.94□□□□□ -0.18
CXXC1-212ENST00000589940 OR1L8Q8NGR8 309 aa13.94□□□□□ -0.18
CXXC1-212ENST00000589940 CLCC1Q96S66 551 aa13.94□□□□□ -0.18
CXXC1-212ENST00000589940 BCL2L11O43521 198 aa13.93□□□□□ -0.18
CXXC1-212ENST00000589940 OPN1MWP04001 364 aa13.93□□□□□ -0.18
CXXC1-212ENST00000589940 OPN1MW2P0DN77 364 aa13.93□□□□□ -0.18
CXXC1-212ENST00000589940 OPN1MW3P0DN78 364 aa13.93□□□□□ -0.18
CXXC1-212ENST00000589940 VDAC2P45880 294 aaPredicted RBP13.93□□□□□ -0.18
CXXC1-212ENST00000589940 HOXA1P49639 335 aaPredicted RBP13.93□□□□□ -0.18
CXXC1-212ENST00000589940 EWSR1Q01844 656 aaKnown RBP eCLIP13.93□□□□□ -0.18
CXXC1-212ENST00000589940 PLGLAQ15195 96 aa13.93□□□□□ -0.18
CXXC1-212ENST00000589940 HINT2Q9BX68 163 aa13.93□□□□□ -0.18
CXXC1-212ENST00000589940 SOX21Q9Y651 276 aaPredicted RBP13.93□□□□□ -0.18
CXXC1-212ENST00000589940 MAS1LP35410 378 aa13.92□□□□□ -0.18
CXXC1-212ENST00000589940 SPANXN5Q5MJ07 72 aa13.92□□□□□ -0.18
CXXC1-212ENST00000589940 ARPC5LQ9BPX5 153 aa13.92□□□□□ -0.18
CXXC1-212ENST00000589940 HIPK2Q9H2X6 1198 aa13.92□□□□□ -0.18
CXXC1-212ENST00000589940 HEYLQ9NQ87 328 aaPredicted RBP13.92□□□□□ -0.18
CXXC1-212ENST00000589940 NDUFA4L2Q9NRX3 87 aa13.92□□□□□ -0.18
CXXC1-212ENST00000589940 TLN2Q9Y4G6 2542 aa13.92□□□□□ -0.18
CXXC1-212ENST00000589940 TET2Q6N021 2002 aaPredicted RBP13.92□□□□□ -0.18
CXXC1-212ENST00000589940 OTOGQ6ZRI0 2925 aa13.92□□□□□ -0.18
CXXC1-212ENST00000589940 NHLH2Q02577 135 aa13.92□□□□□ -0.18
CXXC1-212ENST00000589940 BAXQ07812 192 aa13.92□□□□□ -0.18
CXXC1-212ENST00000589940 C5orf64Q2M2E5 130 aa13.92□□□□□ -0.18
CXXC1-212ENST00000589940 STX12Q86Y82 276 aa13.92□□□□□ -0.18
CXXC1-212ENST00000589940 OR8H1Q8NGG4 311 aa13.92□□□□□ -0.18
CXXC1-212ENST00000589940 GON7Q9BXV9 100 aa13.92□□□□□ -0.18
CXXC1-212ENST00000589940 PLEKHA3Q9HB20 300 aa13.92□□□□□ -0.18
CXXC1-212ENST00000589940 ENY2Q9NPA8 101 aa13.92□□□□□ -0.18
CXXC1-212ENST00000589940 ACTL6BO94805 426 aa13.91□□□□□ -0.18
CXXC1-212ENST00000589940 CLEC9AQ6UXN8 241 aa13.91□□□□□ -0.18
CXXC1-212ENST00000589940 C1RLQ9NZP8 487 aa13.91□□□□□ -0.18
CXXC1-212ENST00000589940 ZFHX3Q15911 3703 aa13.91□□□□□ -0.18
CXXC1-212ENST00000589940 NCBP2LA6PVI3 153 aaKnown RBP13.91□□□□□ -0.18
CXXC1-212ENST00000589940 SULT1A1P50225 295 aa13.91□□□□□ -0.18
CXXC1-212ENST00000589940 TNXAQ16473 311 aa13.91□□□□□ -0.18
CXXC1-212ENST00000589940 LRRC75BQ2VPJ9 315 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 109.5 ms