RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 HOXB5P09067 269 aa10.75□□□□□ -0.69
VMP1-210ENST00000589823 P0C879 139 aa10.75□□□□□ -0.69
VMP1-210ENST00000589823 MDKP21741 143 aaPredicted RBP10.75□□□□□ -0.69
VMP1-210ENST00000589823 RPL27AP46776 148 aaKnown RBP10.75□□□□□ -0.69
VMP1-210ENST00000589823 COMPP49747 757 aaPredicted RBP10.75□□□□□ -0.69
VMP1-210ENST00000589823 OR2B8PP59922 312 aa10.75□□□□□ -0.69
VMP1-210ENST00000589823 NDPQ00604 133 aa10.75□□□□□ -0.69
VMP1-210ENST00000589823 TMEM267Q0VDI3 215 aaPredicted RBP10.75□□□□□ -0.69
VMP1-210ENST00000589823 IZUMO4Q1ZYL8 232 aa10.75□□□□□ -0.69
VMP1-210ENST00000589823 TMEM95Q3KNT9 176 aa10.75□□□□□ -0.69
VMP1-210ENST00000589823 C12orf45Q8N5I9 185 aaPredicted RBP10.75□□□□□ -0.69
VMP1-210ENST00000589823 MINDY2Q8NBR6 621 aa10.75□□□□□ -0.69
VMP1-210ENST00000589823 UXS1Q8NBZ7 420 aa10.75□□□□□ -0.69
VMP1-210ENST00000589823 CHPT1Q8WUD6 406 aa10.75□□□□□ -0.69
VMP1-210ENST00000589823 SRSF12Q8WXF0 261 aaKnown RBP10.75□□□□□ -0.69
VMP1-210ENST00000589823 GPR146Q96CH1 333 aa10.75□□□□□ -0.69
VMP1-210ENST00000589823 GON7Q9BXV9 100 aa10.75□□□□□ -0.69
VMP1-210ENST00000589823 SERTAD4Q9NUC0 356 aa10.75□□□□□ -0.69
VMP1-210ENST00000589823 TMED3Q9Y3Q3 217 aa10.75□□□□□ -0.69
VMP1-210ENST00000589823 RNF114Q9Y508 228 aa10.75□□□□□ -0.69
VMP1-210ENST00000589823 OR51B2Q9Y5P1 312 aa10.75□□□□□ -0.69
VMP1-210ENST00000589823 MSGN1A6NI15 193 aa10.74□□□□□ -0.69
VMP1-210ENST00000589823 SNRPGP15A8MWD9 76 aa10.74□□□□□ -0.69
VMP1-210ENST00000589823 IGF1P05019 195 aa10.74□□□□□ -0.69
VMP1-210ENST00000589823 SSBP2P81877 361 aaPredicted RBP10.74□□□□□ -0.69
VMP1-210ENST00000589823 OXA1LQ15070 435 aa10.74□□□□□ -0.69
VMP1-210ENST00000589823 NMSQ5H8A3 153 aa10.74□□□□□ -0.69
VMP1-210ENST00000589823 C10orf55Q5SWW7 151 aa10.74□□□□□ -0.69
VMP1-210ENST00000589823 THOC7Q6I9Y2 204 aaKnown RBP10.74□□□□□ -0.69
VMP1-210ENST00000589823 CENPVQ7Z7K6 275 aaPredicted RBP10.74□□□□□ -0.69
VMP1-210ENST00000589823 STPG2Q8N412 459 aa10.74□□□□□ -0.69
VMP1-210ENST00000589823 OR1L8Q8NGR8 309 aa10.74□□□□□ -0.69
VMP1-210ENST00000589823 OR5B3Q8NH48 314 aa10.74□□□□□ -0.69
VMP1-210ENST00000589823 SGMS2Q8NHU3 365 aa10.74□□□□□ -0.69
VMP1-210ENST00000589823 NOL4LQ96MY1 436 aaPredicted RBP10.74□□□□□ -0.69
VMP1-210ENST00000589823 FYTTD1Q96QD9 318 aaKnown RBP10.74□□□□□ -0.69
VMP1-210ENST00000589823 SPIN2AQ99865 258 aa10.74□□□□□ -0.69
VMP1-210ENST00000589823 SPIN2BQ9BPZ2 258 aa10.74□□□□□ -0.69
VMP1-210ENST00000589823 FAM103A1Q9BTL3 118 aaKnown RBP10.74□□□□□ -0.69
VMP1-210ENST00000589823 PDCD10Q9BUL8 212 aa10.74□□□□□ -0.69
VMP1-210ENST00000589823 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.74□□□□□ -0.69
VMP1-210ENST00000589823 TMEM14BQ9NUH8 114 aa10.74□□□□□ -0.69
VMP1-210ENST00000589823 CACNG5Q9UF02 275 aa10.74□□□□□ -0.69
VMP1-210ENST00000589823 LINC00527Q9UJ94 153 aa10.74□□□□□ -0.69
VMP1-210ENST00000589823 FOXA2Q9Y261 457 aaPredicted RBP10.74□□□□□ -0.69
VMP1-210ENST00000589823 TRAV41A0A0B4J266 112 aa10.73□□□□□ -0.69
VMP1-210ENST00000589823 A0A0B4J293 547 aa10.73□□□□□ -0.69
VMP1-210ENST00000589823 TEX50A0A1B0GTY4 177 aa10.73□□□□□ -0.69
VMP1-210ENST00000589823 A0A1B0GU03 582 aa10.73□□□□□ -0.69
VMP1-210ENST00000589823 ADAP1O75689 374 aa10.73□□□□□ -0.69
VMP1-210ENST00000589823 OPN1MWP04001 364 aa10.73□□□□□ -0.69
VMP1-210ENST00000589823 SULT1A3P0DMM9 295 aa10.73□□□□□ -0.69
VMP1-210ENST00000589823 SULT1A4P0DMN0 295 aa10.73□□□□□ -0.69
VMP1-210ENST00000589823 OPN1MW2P0DN77 364 aa10.73□□□□□ -0.69
VMP1-210ENST00000589823 OPN1MW3P0DN78 364 aa10.73□□□□□ -0.69
VMP1-210ENST00000589823 MYOD1P15172 320 aa10.73□□□□□ -0.69
VMP1-210ENST00000589823 CRIP2P52943 208 aaPredicted RBP10.73□□□□□ -0.69
VMP1-210ENST00000589823 SLC35B1P78383 322 aa10.73□□□□□ -0.69
VMP1-210ENST00000589823 SMCO1Q147U7 214 aa10.73□□□□□ -0.69
VMP1-210ENST00000589823 TATDN3Q17R31 274 aa10.73□□□□□ -0.69
VMP1-210ENST00000589823 ECSCRQ19T08 205 aa10.73□□□□□ -0.69
VMP1-210ENST00000589823 GGNBP1Q5YKI7 109 aa10.73□□□□□ -0.69
VMP1-210ENST00000589823 UNQ5815/PRO19632Q6UWF5 114 aa10.73□□□□□ -0.69
VMP1-210ENST00000589823 ZNF429Q86V71 674 aa10.73□□□□□ -0.69
VMP1-210ENST00000589823 LFNGQ8NES3 379 aa10.73□□□□□ -0.69
VMP1-210ENST00000589823 HINT2Q9BX68 163 aa10.73□□□□□ -0.69
VMP1-210ENST00000589823 QTRT1Q9BXR0 403 aaKnown RBP10.73□□□□□ -0.69
VMP1-210ENST00000589823 CACFD1Q9UGQ2 172 aa10.73□□□□□ -0.69
VMP1-210ENST00000589823 ZNF580Q9UK33 172 aa10.73□□□□□ -0.69
VMP1-210ENST00000589823 ZNF257Q9Y2Q1 563 aa10.73□□□□□ -0.69
VMP1-210ENST00000589823 FBXO7Q9Y3I1 522 aa10.73□□□□□ -0.69
VMP1-210ENST00000589823 WSB1Q9Y6I7 421 aa10.73□□□□□ -0.69
VMP1-210ENST00000589823 PSMB11A5LHX3 300 aa10.72□□□□□ -0.69
VMP1-210ENST00000589823 IFNA17P01571 189 aa10.72□□□□□ -0.69
VMP1-210ENST00000589823 TRAPPC2P0DI81 140 aa10.72□□□□□ -0.69
VMP1-210ENST00000589823 TRAPPC2BP0DI82 140 aa10.72□□□□□ -0.69
VMP1-210ENST00000589823 EGR2P11161 476 aaPredicted RBP10.72□□□□□ -0.69
VMP1-210ENST00000589823 SLC25A6P12236 298 aa10.72□□□□□ -0.69
VMP1-210ENST00000589823 AKIRIN2Q53H80 203 aa10.72□□□□□ -0.69
VMP1-210ENST00000589823 AWAT1Q58HT5 328 aa10.72□□□□□ -0.69
VMP1-210ENST00000589823 Q6ZRM9 215 aa10.72□□□□□ -0.69
VMP1-210ENST00000589823 MRPL41Q8IXM3 137 aaKnown RBP10.72□□□□□ -0.69
VMP1-210ENST00000589823 KLHDC1Q8N7A1 406 aa10.72□□□□□ -0.69
VMP1-210ENST00000589823 OR1S1Q8NH92 325 aa10.72□□□□□ -0.69
VMP1-210ENST00000589823 TMEM68Q96MH6 324 aa10.72□□□□□ -0.69
VMP1-210ENST00000589823 WNT10AQ9GZT5 417 aa10.72□□□□□ -0.69
VMP1-210ENST00000589823 COA4Q9NYJ1 87 aa10.72□□□□□ -0.69
VMP1-210ENST00000589823 DBX1A6NMT0 343 aa10.71□□□□□ -0.69
VMP1-210ENST00000589823 G3V318 75 aa10.71□□□□□ -0.69
VMP1-210ENST00000589823 ST8SIA3O43173 380 aa10.71□□□□□ -0.69
VMP1-210ENST00000589823 SSNA1O43805 119 aa10.71□□□□□ -0.69
VMP1-210ENST00000589823 PROK1P58294 105 aa10.71□□□□□ -0.69
VMP1-210ENST00000589823 HSPE1P61604 102 aaKnown RBP10.71□□□□□ -0.69
VMP1-210ENST00000589823 SRSF8Q9BRL6 282 aaKnown RBP10.71□□□□□ -0.69
VMP1-210ENST00000589823 ALG5Q9Y673 324 aa10.71□□□□□ -0.69
VMP1-210ENST00000589823 ATRQ13535 2644 aa10.7□□□□□ -0.7
VMP1-210ENST00000589823 A0A1W2PN81 502 aa10.7□□□□□ -0.7
VMP1-210ENST00000589823 C7orf66A4D0T2 115 aa10.7□□□□□ -0.7
VMP1-210ENST00000589823 HMX3A6NHT5 357 aa10.7□□□□□ -0.7
VMP1-210ENST00000589823 FAM25EA8MYX2 175 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms