RNA–Protein interactions for RNA: ENST00000589318.5

DDX39A-209, Transcript of DExD-box helicase 39A, human

TSL 1 (best)

Gene DDX39A, Length 1,903 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX39A-209	ENST00000589318	NAT8	Q9UHE5	227 aa		12.7	□□□□□ -0.38
DDX39A-209	ENST00000589318	TMEM56-RWDD3	S4R434	201 aa		12.7	□□□□□ -0.38
DDX39A-209	ENST00000589318	ARID1A	O14497	2285 aa		12.7	□□□□□ -0.38
DDX39A-209	ENST00000589318	FLNC	Q14315	2725 aa		12.69	□□□□□ -0.38
DDX39A-209	ENST00000589318	IGHV3-43	A0A0B4J1X8	118 aa		12.69	□□□□□ -0.38
DDX39A-209	ENST00000589318		H0Y980	276 aa		12.69	□□□□□ -0.38
DDX39A-209	ENST00000589318	F2RL2	O00254	374 aa		12.69	□□□□□ -0.38
DDX39A-209	ENST00000589318	ITGB1BP1	O14713	200 aa		12.69	□□□□□ -0.38
DDX39A-209	ENST00000589318	TYMS	P04818	313 aa		12.69	□□□□□ -0.38
DDX39A-209	ENST00000589318	IGHV3-43D	P0DP04	118 aa		12.69	□□□□□ -0.38
DDX39A-209	ENST00000589318	F2R	P25116	425 aa		12.69	□□□□□ -0.38
DDX39A-209	ENST00000589318	UCP1	P25874	307 aa		12.69	□□□□□ -0.38
DDX39A-209	ENST00000589318	LOXL3	P58215	753 aa		12.69	□□□□□ -0.38
DDX39A-209	ENST00000589318	C17orf58	Q2M2W7	97 aa		12.69	□□□□□ -0.38
DDX39A-209	ENST00000589318	TEX38	Q6PEX7	206 aa		12.69	□□□□□ -0.38
DDX39A-209	ENST00000589318	ZNF66	Q6ZN08	573 aa		12.69	□□□□□ -0.38
DDX39A-209	ENST00000589318	DRAM1	Q8N682	238 aa		12.69	□□□□□ -0.38
DDX39A-209	ENST00000589318	CALY	Q9NYX4	217 aa		12.69	□□□□□ -0.38
DDX39A-209	ENST00000589318	NAGK	Q9UJ70	344 aa		12.69	□□□□□ -0.38
DDX39A-209	ENST00000589318	YLPM1	P49750	1951 aa	Known RBP	12.69	□□□□□ -0.38
DDX39A-209	ENST00000589318	NKX6-3	A6NJ46	265 aa		12.68	□□□□□ -0.38
DDX39A-209	ENST00000589318	TAS2R30	P59541	319 aa		12.68	□□□□□ -0.38
DDX39A-209	ENST00000589318	VAMP2	P63027	116 aa		12.68	□□□□□ -0.38
DDX39A-209	ENST00000589318	ACTL10	Q5JWF8	245 aa		12.68	□□□□□ -0.38
DDX39A-209	ENST00000589318	MEX3B	Q6ZN04	569 aa	Known RBP	12.68	□□□□□ -0.38
DDX39A-209	ENST00000589318	GBGT1	Q8N5D6	347 aa		12.68	□□□□□ -0.38
DDX39A-209	ENST00000589318	USF3	Q68DE3	2245 aa		12.68	□□□□□ -0.38
DDX39A-209	ENST00000589318	PIGBOS1	A0A0B4J2F0	54 aa		12.68	□□□□□ -0.38
DDX39A-209	ENST00000589318	DUXB	A0A1W2PPF3	345 aa		12.68	□□□□□ -0.38
DDX39A-209	ENST00000589318	LYNX1	G3V0Z9	82 aa		12.68	□□□□□ -0.38
DDX39A-209	ENST00000589318	LYNX1	P0DP58	116 aa		12.68	□□□□□ -0.38
DDX39A-209	ENST00000589318	COL8A2	P25067	703 aa		12.68	□□□□□ -0.38
DDX39A-209	ENST00000589318	EIF4EBP1	Q13541	118 aa	Predicted RBP	12.68	□□□□□ -0.38
DDX39A-209	ENST00000589318	ARSJ	Q5FYB0	599 aa	Predicted RBP	12.68	□□□□□ -0.38
DDX39A-209	ENST00000589318	LYPD2	Q6UXB3	125 aa		12.68	□□□□□ -0.38
DDX39A-209	ENST00000589318	ZNF645	Q8N7E2	425 aa		12.68	□□□□□ -0.38
DDX39A-209	ENST00000589318	NINJ1	Q92982	152 aa		12.68	□□□□□ -0.38
DDX39A-209	ENST00000589318	ANAPC16	Q96DE5	110 aa		12.68	□□□□□ -0.38
DDX39A-209	ENST00000589318	MIEN1	Q9BRT3	115 aa		12.68	□□□□□ -0.38
DDX39A-209	ENST00000589318	CTSZ	Q9UBR2	303 aa		12.68	□□□□□ -0.38
DDX39A-209	ENST00000589318	KCNS2	Q9ULS6	477 aa		12.68	□□□□□ -0.38
DDX39A-209	ENST00000589318	GAB2	Q9UQC2	676 aa		12.68	□□□□□ -0.38
DDX39A-209	ENST00000589318	RBM7	Q9Y580	266 aa	Known RBP	12.68	□□□□□ -0.38
DDX39A-209	ENST00000589318	SCGB1D1	O95968	90 aa		12.67	□□□□□ -0.38
DDX39A-209	ENST00000589318	OMG	P23515	440 aa		12.67	□□□□□ -0.38
DDX39A-209	ENST00000589318	SRP14	P37108	136 aa	Known RBP	12.67	□□□□□ -0.38
DDX39A-209	ENST00000589318	NKX2-1	P43699	371 aa	Predicted RBP	12.67	□□□□□ -0.38
DDX39A-209	ENST00000589318	UTF1	Q5T230	341 aa		12.67	□□□□□ -0.38
DDX39A-209	ENST00000589318	DTX2	Q86UW9	622 aa		12.67	□□□□□ -0.38
DDX39A-209	ENST00000589318	SELENOH	Q8IZQ5	122 aa	Known RBP	12.67	□□□□□ -0.38
DDX39A-209	ENST00000589318	OR52M1	Q8NGK5	317 aa		12.67	□□□□□ -0.38
DDX39A-209	ENST00000589318	OR51H1	Q8NH63	302 aa		12.67	□□□□□ -0.38
DDX39A-209	ENST00000589318	MBD3L1	Q8WWY6	194 aa		12.67	□□□□□ -0.38
DDX39A-209	ENST00000589318	CORO2A	Q92828	525 aa		12.67	□□□□□ -0.38
DDX39A-209	ENST00000589318	OR2D2	Q9H210	308 aa		12.67	□□□□□ -0.38
DDX39A-209	ENST00000589318	LINC00574	Q9H8X3	128 aa		12.67	□□□□□ -0.38
DDX39A-209	ENST00000589318	LPAR2	Q9HBW0	351 aa		12.67	□□□□□ -0.38
DDX39A-209	ENST00000589318	KAAG1	Q9UBP8	84 aa		12.67	□□□□□ -0.38
DDX39A-209	ENST00000589318	SLC25A10	Q9UBX3	287 aa	Predicted RBP	12.67	□□□□□ -0.38
DDX39A-209	ENST00000589318	JPT1	Q9UK76	154 aa		12.67	□□□□□ -0.38
DDX39A-209	ENST00000589318	ZFP30	Q9Y2G7	519 aa		12.67	□□□□□ -0.38
DDX39A-209	ENST00000589318	UBE2J1	Q9Y385	318 aa	Predicted RBP	12.67	□□□□□ -0.38
DDX39A-209	ENST00000589318	USP9X	Q93008	2570 aa	Predicted RBP	12.67	□□□□□ -0.38
DDX39A-209	ENST00000589318	KBTBD11-OT1	A0A1B0GTJ5	212 aa		12.66	□□□□□ -0.38
DDX39A-209	ENST00000589318		A0A1W2PPQ1	181 aa		12.66	□□□□□ -0.38
DDX39A-209	ENST00000589318	GNG10	P50151	68 aa		12.66	□□□□□ -0.38
DDX39A-209	ENST00000589318	LTC4S	Q16873	150 aa		12.66	□□□□□ -0.38
DDX39A-209	ENST00000589318	MORN2	Q502X0	79 aa		12.66	□□□□□ -0.38
DDX39A-209	ENST00000589318	COL5A1-AS1	Q5SY13	56 aa		12.66	□□□□□ -0.38
DDX39A-209	ENST00000589318	CYP2G1P	Q6ZSU1	146 aa		12.66	□□□□□ -0.38
DDX39A-209	ENST00000589318	TMEM252	Q8N6L7	170 aa		12.66	□□□□□ -0.38
DDX39A-209	ENST00000589318	OR51G1	Q8NGK1	321 aa		12.66	□□□□□ -0.38
DDX39A-209	ENST00000589318	ATP5S	Q99766	215 aa		12.66	□□□□□ -0.38
DDX39A-209	ENST00000589318	ABHD14A	Q9BUJ0	271 aa		12.66	□□□□□ -0.38
DDX39A-209	ENST00000589318	CLN8	Q9UBY8	286 aa		12.66	□□□□□ -0.38
DDX39A-209	ENST00000589318	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	12.66	□□□□□ -0.38
DDX39A-209	ENST00000589318	DOPEY1	Q5JWR5	2465 aa		12.66	□□□□□ -0.38
DDX39A-209	ENST00000589318	TRGV10	A0A0A0MS01	117 aa		12.66	□□□□□ -0.38
DDX39A-209	ENST00000589318	IGSF23	A1L1A6	192 aa		12.66	□□□□□ -0.38
DDX39A-209	ENST00000589318	YPEL1	O60688	119 aa		12.66	□□□□□ -0.38
DDX39A-209	ENST00000589318	HRAS	P01112	189 aa		12.66	□□□□□ -0.38
DDX39A-209	ENST00000589318	S100G	P29377	79 aa		12.66	□□□□□ -0.38
DDX39A-209	ENST00000589318	BRS3	P32247	399 aa		12.66	□□□□□ -0.38
DDX39A-209	ENST00000589318	LCN2	P80188	198 aa		12.66	□□□□□ -0.38
DDX39A-209	ENST00000589318	NCR3LG1	Q68D85	454 aa		12.66	□□□□□ -0.38
DDX39A-209	ENST00000589318	ZNF843	Q8N446	348 aa		12.66	□□□□□ -0.38
DDX39A-209	ENST00000589318	YPEL2	Q96QA6	119 aa		12.66	□□□□□ -0.38
DDX39A-209	ENST00000589318	LAMP3	Q9UQV4	416 aa		12.66	□□□□□ -0.38
DDX39A-209	ENST00000589318	FAM24A	A6NFZ4	105 aa		12.65	□□□□□ -0.38
DDX39A-209	ENST00000589318	ADAM20	O43506	726 aa		12.65	□□□□□ -0.38
DDX39A-209	ENST00000589318	FSTL3	O95633	263 aa		12.65	□□□□□ -0.38
DDX39A-209	ENST00000589318	HPRT1	P00492	218 aa		12.65	□□□□□ -0.38
DDX39A-209	ENST00000589318	RPL29	P47914	159 aa	Known RBP	12.65	□□□□□ -0.38
DDX39A-209	ENST00000589318	MSMO1	Q15800	293 aa		12.65	□□□□□ -0.38
DDX39A-209	ENST00000589318	ZNF705A	Q6ZN79	300 aa	Predicted RBP	12.65	□□□□□ -0.38
DDX39A-209	ENST00000589318	ZBTB34	Q8NCN2	500 aa		12.65	□□□□□ -0.38
DDX39A-209	ENST00000589318	OR5C1	Q8NGR4	320 aa		12.65	□□□□□ -0.38
DDX39A-209	ENST00000589318	IL22RA2	Q969J5	263 aa		12.65	□□□□□ -0.38
DDX39A-209	ENST00000589318	GNG13	Q9P2W3	67 aa		12.65	□□□□□ -0.38
DDX39A-209	ENST00000589318	GNG12	Q9UBI6	72 aa		12.65	□□□□□ -0.38

Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms