RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 GRPEL2Q8TAA5 225 aa15.4■□□□□ 0.06
CIRBP-220ENST00000588917 WFDC12Q8WWY7 111 aa15.4■□□□□ 0.06
CIRBP-220ENST00000588917 SRSF12Q8WXF0 261 aaKnown RBP15.4■□□□□ 0.06
CIRBP-220ENST00000588917 LSM10Q969L4 123 aaKnown RBP15.4■□□□□ 0.06
CIRBP-220ENST00000588917 PHB2Q99623 299 aa15.4■□□□□ 0.06
CIRBP-220ENST00000588917 NUDT15Q9NV35 164 aa15.4■□□□□ 0.06
CIRBP-220ENST00000588917 CACFD1Q9UGQ2 172 aa15.4■□□□□ 0.06
CIRBP-220ENST00000588917 LINC00527Q9UJ94 153 aa15.4■□□□□ 0.06
CIRBP-220ENST00000588917 TRAV6A0A075B6T7 132 aa15.39■□□□□ 0.05
CIRBP-220ENST00000588917 A0A0B4J2A0 478 aa15.39■□□□□ 0.05
CIRBP-220ENST00000588917 C9orf170A2RU37 121 aa15.39■□□□□ 0.05
CIRBP-220ENST00000588917 HLA-AP01891 365 aaKnown RBP15.39■□□□□ 0.05
CIRBP-220ENST00000588917 EGR2P11161 476 aaPredicted RBP15.39■□□□□ 0.05
CIRBP-220ENST00000588917 RPL27AP46776 148 aaKnown RBP15.39■□□□□ 0.05
CIRBP-220ENST00000588917 MECP2P51608 486 aaKnown RBP15.39■□□□□ 0.05
CIRBP-220ENST00000588917 THOC7Q6I9Y2 204 aaKnown RBP15.39■□□□□ 0.05
CIRBP-220ENST00000588917 PLET1Q6UQ28 207 aa15.39■□□□□ 0.05
CIRBP-220ENST00000588917 UNQ5815/PRO19632Q6UWF5 114 aa15.39■□□□□ 0.05
CIRBP-220ENST00000588917 SHISA2Q6UWI4 295 aa15.39■□□□□ 0.05
CIRBP-220ENST00000588917 NRARPQ7Z6K4 114 aa15.39■□□□□ 0.05
CIRBP-220ENST00000588917 LRTM2Q8N967 370 aa15.39■□□□□ 0.05
CIRBP-220ENST00000588917 LFNGQ8NES3 379 aa15.39■□□□□ 0.05
CIRBP-220ENST00000588917 COQ8AQ8NI60 647 aa15.39■□□□□ 0.05
CIRBP-220ENST00000588917 SHPKQ9UHJ6 478 aa15.39■□□□□ 0.05
CIRBP-220ENST00000588917 WSB1Q9Y6I7 421 aa15.39■□□□□ 0.05
CIRBP-220ENST00000588917 RBMXL2O75526 392 aaKnown RBP15.38■□□□□ 0.05
CIRBP-220ENST00000588917 DUS4LO95620 317 aaKnown RBP15.38■□□□□ 0.05
CIRBP-220ENST00000588917 IGKV1-5P01602 117 aa15.38■□□□□ 0.05
CIRBP-220ENST00000588917 ANXA7P20073 488 aaKnown RBP15.38■□□□□ 0.05
CIRBP-220ENST00000588917 SSBP2P81877 361 aaPredicted RBP15.38■□□□□ 0.05
CIRBP-220ENST00000588917 HSD17B13Q7Z5P4 300 aaPredicted RBP15.38■□□□□ 0.05
CIRBP-220ENST00000588917 LYG2Q86SG7 212 aa15.38■□□□□ 0.05
CIRBP-220ENST00000588917 MINDY2Q8NBR6 621 aa15.38■□□□□ 0.05
CIRBP-220ENST00000588917 OR5M8Q8NGP6 311 aa15.38■□□□□ 0.05
CIRBP-220ENST00000588917 OR1L8Q8NGR8 309 aa15.38■□□□□ 0.05
CIRBP-220ENST00000588917 OR5B3Q8NH48 314 aa15.38■□□□□ 0.05
CIRBP-220ENST00000588917 WIPF2Q8TF74 440 aaPredicted RBP15.38■□□□□ 0.05
CIRBP-220ENST00000588917 SRSF8Q9BRL6 282 aaKnown RBP15.38■□□□□ 0.05
CIRBP-220ENST00000588917 TRAV3A0A0B4J244 114 aa15.37■□□□□ 0.05
CIRBP-220ENST00000588917 IGHG4P01861 327 aa15.37■□□□□ 0.05
CIRBP-220ENST00000588917 ELANEP08246 267 aa15.37■□□□□ 0.05
CIRBP-220ENST00000588917 OR9G9P0C7N8 305 aa15.37■□□□□ 0.05
CIRBP-220ENST00000588917 PPIFP30405 207 aaKnown RBP15.37■□□□□ 0.05
CIRBP-220ENST00000588917 NDPQ00604 133 aa15.37■□□□□ 0.05
CIRBP-220ENST00000588917 DHRS2Q13268 280 aa15.37■□□□□ 0.05
CIRBP-220ENST00000588917 DCTN2Q13561 401 aaKnown RBP15.37■□□□□ 0.05
CIRBP-220ENST00000588917 ECSCRQ19T08 205 aa15.37■□□□□ 0.05
CIRBP-220ENST00000588917 ZNF429Q86V71 674 aa15.37■□□□□ 0.05
CIRBP-220ENST00000588917 LHFPL5Q8TAF8 219 aa15.37■□□□□ 0.05
CIRBP-220ENST00000588917 CASTOR1Q8WTX7 329 aa15.37■□□□□ 0.05
CIRBP-220ENST00000588917 FAM103A1Q9BTL3 118 aaKnown RBP15.37■□□□□ 0.05
CIRBP-220ENST00000588917 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.37■□□□□ 0.05
CIRBP-220ENST00000588917 FOXA2Q9Y261 457 aaPredicted RBP15.37■□□□□ 0.05
CIRBP-220ENST00000588917 ZNF257Q9Y2Q1 563 aa15.37■□□□□ 0.05
CIRBP-220ENST00000588917 FBXO7Q9Y3I1 522 aa15.37■□□□□ 0.05
CIRBP-220ENST00000588917 OR51B2Q9Y5P1 312 aa15.37■□□□□ 0.05
CIRBP-220ENST00000588917 MGAM2Q2M2H8 2515 aa15.37■□□□□ 0.05
CIRBP-220ENST00000588917 TEX50A0A1B0GTY4 177 aa15.36■□□□□ 0.05
CIRBP-220ENST00000588917 C15orf61A6NNL5 157 aa15.36■□□□□ 0.05
CIRBP-220ENST00000588917 G3V318 75 aa15.36■□□□□ 0.05
CIRBP-220ENST00000588917 FBXO24O75426 580 aa15.36■□□□□ 0.05
CIRBP-220ENST00000588917 TRAPPC2P0DI81 140 aa15.36■□□□□ 0.05
CIRBP-220ENST00000588917 TRAPPC2BP0DI82 140 aa15.36■□□□□ 0.05
CIRBP-220ENST00000588917 CFHR3Q02985 330 aa15.36■□□□□ 0.05
CIRBP-220ENST00000588917 FOXE3Q13461 319 aa15.36■□□□□ 0.05
CIRBP-220ENST00000588917 TMEM65Q6PI78 240 aa15.36■□□□□ 0.05
CIRBP-220ENST00000588917 ZNF329Q86UD4 541 aa15.36■□□□□ 0.05
CIRBP-220ENST00000588917 MRPL41Q8IXM3 137 aaKnown RBP15.36■□□□□ 0.05
CIRBP-220ENST00000588917 SLC35G3Q8N808 338 aa15.36■□□□□ 0.05
CIRBP-220ENST00000588917 FYTTD1Q96QD9 318 aaKnown RBP15.36■□□□□ 0.05
CIRBP-220ENST00000588917 CITED1Q99966 193 aa15.36■□□□□ 0.05
CIRBP-220ENST00000588917 PDCD10Q9BUL8 212 aa15.36■□□□□ 0.05
CIRBP-220ENST00000588917 QTRT1Q9BXR0 403 aaKnown RBP15.36■□□□□ 0.05
CIRBP-220ENST00000588917 TMEM14BQ9NUH8 114 aa15.36■□□□□ 0.05
CIRBP-220ENST00000588917 TMED3Q9Y3Q3 217 aa15.36■□□□□ 0.05
CIRBP-220ENST00000588917 A0A1W2PN81 502 aa15.35■□□□□ 0.05
CIRBP-220ENST00000588917 PTTG1O95997 202 aa15.35■□□□□ 0.05
CIRBP-220ENST00000588917 DHFRP00374 187 aa15.35■□□□□ 0.05
CIRBP-220ENST00000588917 OPN1MWP04001 364 aa15.35■□□□□ 0.05
CIRBP-220ENST00000588917 IL5P05113 134 aa15.35■□□□□ 0.05
CIRBP-220ENST00000588917 P0C879 139 aa15.35■□□□□ 0.05
CIRBP-220ENST00000588917 OPN1MW2P0DN77 364 aa15.35■□□□□ 0.05
CIRBP-220ENST00000588917 OPN1MW3P0DN78 364 aa15.35■□□□□ 0.05
CIRBP-220ENST00000588917 CHRNA7P36544 502 aa15.35■□□□□ 0.05
CIRBP-220ENST00000588917 HSPE1P61604 102 aaKnown RBP15.35■□□□□ 0.05
CIRBP-220ENST00000588917 C19orf54Q5BKX5 351 aa15.35■□□□□ 0.05
CIRBP-220ENST00000588917 CXorf66Q5JRM2 361 aaPredicted RBP15.35■□□□□ 0.05
CIRBP-220ENST00000588917 LYZL2Q7Z4W2 148 aa15.35■□□□□ 0.05
CIRBP-220ENST00000588917 ZFP57Q9NU63 452 aa15.35■□□□□ 0.05
CIRBP-220ENST00000588917 NSG2Q9Y328 171 aa15.35■□□□□ 0.05
CIRBP-220ENST00000588917 INMT-MINDY4F8WBC2 141 aa15.34■□□□□ 0.05
CIRBP-220ENST00000588917 H3BUA1 57 aa15.34■□□□□ 0.05
CIRBP-220ENST00000588917 PRAF2O60831 178 aa15.34■□□□□ 0.05
CIRBP-220ENST00000588917 BRI3O95415 125 aa15.34■□□□□ 0.05
CIRBP-220ENST00000588917 IGLV1-40P01703 118 aa15.34■□□□□ 0.05
CIRBP-220ENST00000588917 OR2B8PP59922 312 aa15.34■□□□□ 0.05
CIRBP-220ENST00000588917 ANKRD55Q3KP44 614 aa15.34■□□□□ 0.05
CIRBP-220ENST00000588917 TTC9CQ8N5M4 171 aa15.34■□□□□ 0.05
CIRBP-220ENST00000588917 GPR146Q96CH1 333 aa15.34■□□□□ 0.05
CIRBP-220ENST00000588917 MARVELD1Q9BSK0 173 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms