RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 OR2F1Q13607 317 aa17.84■□□□□ 0.45
ATG4D-209ENST00000588857 CLEC9AQ6UXN8 241 aa17.84■□□□□ 0.45
ATG4D-209ENST00000588857 NANPQ8TBE9 248 aa17.84■□□□□ 0.45
ATG4D-209ENST00000588857 METTL1Q9UBP6 276 aaKnown RBP17.84■□□□□ 0.45
ATG4D-209ENST00000588857 BOLA1Q9Y3E2 137 aa17.84■□□□□ 0.45
ATG4D-209ENST00000588857 A0A0D9SG52 128 aa17.83■□□□□ 0.45
ATG4D-209ENST00000588857 SPDEFO95238 335 aa17.83■□□□□ 0.45
ATG4D-209ENST00000588857 RPL12P30050 165 aaKnown RBP17.83■□□□□ 0.45
ATG4D-209ENST00000588857 RPL23AP62750 156 aaKnown RBP17.83■□□□□ 0.45
ATG4D-209ENST00000588857 ZNF345Q14585 488 aa17.83■□□□□ 0.45
ATG4D-209ENST00000588857 MMDQ15546 238 aa17.83■□□□□ 0.45
ATG4D-209ENST00000588857 THNSL2Q86YJ6 484 aa17.83■□□□□ 0.45
ATG4D-209ENST00000588857 CLCC1Q96S66 551 aa17.83■□□□□ 0.45
ATG4D-209ENST00000588857 ZNF257Q9Y2Q1 563 aa17.83■□□□□ 0.45
ATG4D-209ENST00000588857 RNF222A6NCQ9 220 aa17.83■□□□□ 0.44
ATG4D-209ENST00000588857 LY6G6DO95868 133 aa17.83■□□□□ 0.44
ATG4D-209ENST00000588857 FGF2P09038 288 aa17.83■□□□□ 0.44
ATG4D-209ENST00000588857 FBP1P09467 338 aa17.83■□□□□ 0.44
ATG4D-209ENST00000588857 IAPPP10997 89 aa17.83■□□□□ 0.44
ATG4D-209ENST00000588857 TMEM11P17152 192 aa17.83■□□□□ 0.44
ATG4D-209ENST00000588857 CAV2P51636 162 aa17.83■□□□□ 0.44
ATG4D-209ENST00000588857 RIPPLY3P57055 190 aa17.83■□□□□ 0.44
ATG4D-209ENST00000588857 HSPE1P61604 102 aaKnown RBP17.83■□□□□ 0.44
ATG4D-209ENST00000588857 EBI3Q14213 229 aa17.83■□□□□ 0.44
ATG4D-209ENST00000588857 SPINK9Q5DT21 86 aa17.83■□□□□ 0.44
ATG4D-209ENST00000588857 AQP10Q96PS8 301 aa17.83■□□□□ 0.44
ATG4D-209ENST00000588857 COMMD5Q9GZQ3 224 aa17.83■□□□□ 0.44
ATG4D-209ENST00000588857 MEGF9Q9H1U4 602 aa17.83■□□□□ 0.44
ATG4D-209ENST00000588857 C11orf1Q9H5F2 150 aa17.83■□□□□ 0.44
ATG4D-209ENST00000588857 PLSCR3Q9NRY6 295 aa17.83■□□□□ 0.44
ATG4D-209ENST00000588857 KIAA1456Q9P272 454 aa17.83■□□□□ 0.44
ATG4D-209ENST00000588857 SIGLEC9Q9Y336 463 aa17.83■□□□□ 0.44
ATG4D-209ENST00000588857 WSB1Q9Y6I7 421 aa17.83■□□□□ 0.44
ATG4D-209ENST00000588857 SETD2Q9BYW2 2564 aaPredicted RBP17.82■□□□□ 0.44
ATG4D-209ENST00000588857 NBR2O15453 112 aa17.82■□□□□ 0.44
ATG4D-209ENST00000588857 TMEM50AO95807 157 aa17.82■□□□□ 0.44
ATG4D-209ENST00000588857 PLGLAQ15195 96 aa17.82■□□□□ 0.44
ATG4D-209ENST00000588857 PDLIM3Q53GG5 364 aaPredicted RBP17.82■□□□□ 0.44
ATG4D-209ENST00000588857 FAM120AOSQ5T036 256 aa17.82■□□□□ 0.44
ATG4D-209ENST00000588857 TMUB2Q71RG4 321 aa17.82■□□□□ 0.44
ATG4D-209ENST00000588857 OR2C3Q8N628 320 aa17.82■□□□□ 0.44
ATG4D-209ENST00000588857 OR5B3Q8NH48 314 aa17.82■□□□□ 0.44
ATG4D-209ENST00000588857 DTD1Q8TEA8 209 aa17.82■□□□□ 0.44
ATG4D-209ENST00000588857 SMIM8Q96KF7 97 aa17.82■□□□□ 0.44
ATG4D-209ENST00000588857 CIB3Q96Q77 187 aaPredicted RBP17.82■□□□□ 0.44
ATG4D-209ENST00000588857 ARL6Q9H0F7 186 aa17.82■□□□□ 0.44
ATG4D-209ENST00000588857 ZNF430Q9H8G1 570 aaPredicted RBP17.82■□□□□ 0.44
ATG4D-209ENST00000588857 LYRM2Q9NU23 88 aaPredicted RBP17.82■□□□□ 0.44
ATG4D-209ENST00000588857 TCF19Q9Y242 345 aa17.82■□□□□ 0.44
ATG4D-209ENST00000588857 RRHO14718 337 aa17.81■□□□□ 0.44
ATG4D-209ENST00000588857 CRYGBP07316 175 aa17.81■□□□□ 0.44
ATG4D-209ENST00000588857 HKR1P10072 659 aa17.81■□□□□ 0.44
ATG4D-209ENST00000588857 S100A11P31949 105 aa17.81■□□□□ 0.44
ATG4D-209ENST00000588857 F2RL1P55085 397 aa17.81■□□□□ 0.44
ATG4D-209ENST00000588857 TAS2R30P59541 319 aa17.81■□□□□ 0.44
ATG4D-209ENST00000588857 Q71RC1 249 aaPredicted RBP17.81■□□□□ 0.44
ATG4D-209ENST00000588857 PPP1R27Q86WC6 154 aa17.81■□□□□ 0.44
ATG4D-209ENST00000588857 MMD2Q8IY49 270 aa17.81■□□□□ 0.44
ATG4D-209ENST00000588857 KCNRGQ8N5I3 272 aa17.81■□□□□ 0.44
ATG4D-209ENST00000588857 NPBQ8NG41 125 aa17.81■□□□□ 0.44
ATG4D-209ENST00000588857 ZDHHC16Q969W1 377 aa17.81■□□□□ 0.44
ATG4D-209ENST00000588857 FBXL15Q9H469 300 aa17.81■□□□□ 0.44
ATG4D-209ENST00000588857 TPSG1Q9NRR2 321 aa17.81■□□□□ 0.44
ATG4D-209ENST00000588857 PSENENQ9NZ42 101 aa17.81■□□□□ 0.44
ATG4D-209ENST00000588857 MSGN1A6NI15 193 aa17.8■□□□□ 0.44
ATG4D-209ENST00000588857 ACTL6BO94805 426 aa17.8■□□□□ 0.44
ATG4D-209ENST00000588857 LY86O95711 162 aa17.8■□□□□ 0.44
ATG4D-209ENST00000588857 DYNLT3P51808 116 aa17.8■□□□□ 0.44
ATG4D-209ENST00000588857 PAX9P55771 341 aa17.8■□□□□ 0.44
ATG4D-209ENST00000588857 PRSS8Q16651 343 aa17.8■□□□□ 0.44
ATG4D-209ENST00000588857 Q8N6K4 173 aa17.8■□□□□ 0.44
ATG4D-209ENST00000588857 HINT2Q9BX68 163 aa17.8■□□□□ 0.44
ATG4D-209ENST00000588857 SLC25A31Q9H0C2 315 aa17.8■□□□□ 0.44
ATG4D-209ENST00000588857 ENY2Q9NPA8 101 aa17.8■□□□□ 0.44
ATG4D-209ENST00000588857 TEX50A0A1B0GTY4 177 aa17.79■□□□□ 0.44
ATG4D-209ENST00000588857 FAM24AA6NFZ4 105 aa17.79■□□□□ 0.44
ATG4D-209ENST00000588857 NCBP2LA6PVI3 153 aaKnown RBP17.79■□□□□ 0.44
ATG4D-209ENST00000588857 OPN1MWP04001 364 aa17.79■□□□□ 0.44
ATG4D-209ENST00000588857 OPN1MW2P0DN77 364 aa17.79■□□□□ 0.44
ATG4D-209ENST00000588857 OPN1MW3P0DN78 364 aa17.79■□□□□ 0.44
ATG4D-209ENST00000588857 MYOD1P15172 320 aa17.79■□□□□ 0.44
ATG4D-209ENST00000588857 HOXA1P49639 335 aaPredicted RBP17.79■□□□□ 0.44
ATG4D-209ENST00000588857 TEX29Q8N6K0 151 aa17.79■□□□□ 0.44
ATG4D-209ENST00000588857 OR1L8Q8NGR8 309 aa17.79■□□□□ 0.44
ATG4D-209ENST00000588857 HIPK2Q9H2X6 1198 aa17.79■□□□□ 0.44
ATG4D-209ENST00000588857 C1RLQ9NZP8 487 aa17.79■□□□□ 0.44
ATG4D-209ENST00000588857 SOX21Q9Y651 276 aaPredicted RBP17.79■□□□□ 0.44
ATG4D-209ENST00000588857 PLXNB1O43157 2135 aa17.79■□□□□ 0.44
ATG4D-209ENST00000588857 TLN2Q9Y4G6 2542 aa17.79■□□□□ 0.44
ATG4D-209ENST00000588857 H3BP45 60 aa17.79■□□□□ 0.44
ATG4D-209ENST00000588857 TSC22D2O75157 780 aa17.79■□□□□ 0.44
ATG4D-209ENST00000588857 NDUFA3O95167 84 aa17.79■□□□□ 0.44
ATG4D-209ENST00000588857 FSHBP01225 129 aa17.79■□□□□ 0.44
ATG4D-209ENST00000588857 MAS1LP35410 378 aa17.79■□□□□ 0.44
ATG4D-209ENST00000588857 PRCDQ00LT1 54 aa17.79■□□□□ 0.44
ATG4D-209ENST00000588857 PJVKQ0ZLH3 352 aa17.79■□□□□ 0.44
ATG4D-209ENST00000588857 OR8H1Q8NGG4 311 aa17.79■□□□□ 0.44
ATG4D-209ENST00000588857 HEYLQ9NQ87 328 aaPredicted RBP17.79■□□□□ 0.44
ATG4D-209ENST00000588857 KANTRA0A1W2PQU2 76 aa17.78■□□□□ 0.44
ATG4D-209ENST00000588857 OPCMLQ14982 345 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms