RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 OPN1MW2P0DN77 364 aa16.01■□□□□ 0.15
TRIM47-204ENST00000587339 OPN1MW3P0DN78 364 aa16.01■□□□□ 0.15
TRIM47-204ENST00000587339 PAX1P15863 534 aa16.01■□□□□ 0.15
TRIM47-204ENST00000587339 HOXB4P17483 251 aaPredicted RBP16.01■□□□□ 0.15
TRIM47-204ENST00000587339 TMEM167AQ8TBQ9 72 aa16.01■□□□□ 0.15
TRIM47-204ENST00000587339 SAT2Q96F10 170 aaPredicted RBP16.01■□□□□ 0.15
TRIM47-204ENST00000587339 RITA1Q96K30 269 aa16.01■□□□□ 0.15
TRIM47-204ENST00000587339 COMMD5Q9GZQ3 224 aa16.01■□□□□ 0.15
TRIM47-204ENST00000587339 HILPDAQ9Y5L2 63 aa16.01■□□□□ 0.15
TRIM47-204ENST00000587339 IGHV4-30-2A0A087WSY4 118 aa16■□□□□ 0.15
TRIM47-204ENST00000587339 TEX50A0A1B0GTY4 177 aa16■□□□□ 0.15
TRIM47-204ENST00000587339 A0A1W2PRD5 423 aa16■□□□□ 0.15
TRIM47-204ENST00000587339 A0A1W2PRF3 423 aa16■□□□□ 0.15
TRIM47-204ENST00000587339 A0A1W2PRM7 423 aa16■□□□□ 0.15
TRIM47-204ENST00000587339 SLC25A17O43808 307 aa16■□□□□ 0.15
TRIM47-204ENST00000587339 SCAF4O95104 1147 aaKnown RBP16■□□□□ 0.15
TRIM47-204ENST00000587339 PRCDQ00LT1 54 aa16■□□□□ 0.15
TRIM47-204ENST00000587339 RUNX1Q01196 453 aa16■□□□□ 0.15
TRIM47-204ENST00000587339 LHFPL4Q7Z7J7 247 aa16■□□□□ 0.15
TRIM47-204ENST00000587339 SCGB1C1Q8TD33 95 aa16■□□□□ 0.15
TRIM47-204ENST00000587339 C17orf50Q8WW18 174 aa16■□□□□ 0.15
TRIM47-204ENST00000587339 PLEKHA3Q9HB20 300 aa16■□□□□ 0.15
TRIM47-204ENST00000587339 POLR3KQ9Y2Y1 108 aaPredicted RBP16■□□□□ 0.15
TRIM47-204ENST00000587339 SPG11Q96JI7 2443 aa16■□□□□ 0.15
TRIM47-204ENST00000587339 OR8U8P0C7N1 319 aa16■□□□□ 0.15
TRIM47-204ENST00000587339 DVL1P1P54792 670 aaPredicted RBP16■□□□□ 0.15
TRIM47-204ENST00000587339 ATP6V1FQ16864 119 aa16■□□□□ 0.15
TRIM47-204ENST00000587339 OR2G3Q8NGZ4 309 aa16■□□□□ 0.15
TRIM47-204ENST00000587339 TIMM23O14925 209 aa15.99■□□□□ 0.15
TRIM47-204ENST00000587339 PLA2G2AP14555 144 aa15.99■□□□□ 0.15
TRIM47-204ENST00000587339 TET2Q6N021 2002 aaPredicted RBP15.98■□□□□ 0.15
TRIM47-204ENST00000587339 J3QKU1 62 aa15.98■□□□□ 0.15
TRIM47-204ENST00000587339 RAB5CP51148 216 aa15.98■□□□□ 0.15
TRIM47-204ENST00000587339 LGALS4P56470 323 aa15.98■□□□□ 0.15
TRIM47-204ENST00000587339 DSCR9P59020 149 aa15.98■□□□□ 0.15
TRIM47-204ENST00000587339 LRRC75BQ2VPJ9 315 aa15.98■□□□□ 0.15
TRIM47-204ENST00000587339 TMEM182Q6ZP80 229 aaPredicted RBP15.98■□□□□ 0.15
TRIM47-204ENST00000587339 RFNGQ9Y644 331 aa15.98■□□□□ 0.15
TRIM47-204ENST00000587339 UBE2L5PA0A1B0GUS4 154 aa15.98■□□□□ 0.15
TRIM47-204ENST00000587339 ANKRD34BA5PLL1 514 aa15.98■□□□□ 0.15
TRIM47-204ENST00000587339 MFSD2BA6NFX1 497 aa15.98■□□□□ 0.15
TRIM47-204ENST00000587339 RRHO14718 337 aa15.98■□□□□ 0.15
TRIM47-204ENST00000587339 PRH1P02810 166 aa15.98■□□□□ 0.15
TRIM47-204ENST00000587339 BLOC1S1P78537 153 aa15.98■□□□□ 0.15
TRIM47-204ENST00000587339 PXDC1Q5TGL8 231 aa15.98■□□□□ 0.15
TRIM47-204ENST00000587339 THNSL2Q86YJ6 484 aa15.98■□□□□ 0.15
TRIM47-204ENST00000587339 SLC24A4Q8NFF2 622 aa15.98■□□□□ 0.15
TRIM47-204ENST00000587339 TBX15Q96SF7 602 aa15.98■□□□□ 0.15
TRIM47-204ENST00000587339 TMEM147Q9BVK8 224 aa15.98■□□□□ 0.15
TRIM47-204ENST00000587339 REG4Q9BYZ8 158 aa15.98■□□□□ 0.15
TRIM47-204ENST00000587339 ZNF430Q9H8G1 570 aaPredicted RBP15.98■□□□□ 0.15
TRIM47-204ENST00000587339 F2RL1P55085 397 aa15.97■□□□□ 0.15
TRIM47-204ENST00000587339 RAB11AP62491 216 aa15.97■□□□□ 0.15
TRIM47-204ENST00000587339 SSX2Q16385 188 aa15.97■□□□□ 0.15
TRIM47-204ENST00000587339 MINOS1Q5TGZ0 78 aa15.97■□□□□ 0.15
TRIM47-204ENST00000587339 ETV3LQ6ZN32 361 aa15.97■□□□□ 0.15
TRIM47-204ENST00000587339 TEX45Q8NA69 505 aa15.97■□□□□ 0.15
TRIM47-204ENST00000587339 OR1L8Q8NGR8 309 aa15.97■□□□□ 0.15
TRIM47-204ENST00000587339 PARD6GQ9BYG4 376 aaPredicted RBP15.97■□□□□ 0.15
TRIM47-204ENST00000587339 WDR61Q9GZS3 305 aaKnown RBP15.97■□□□□ 0.15
TRIM47-204ENST00000587339 UQCC1Q9NVA1 299 aa15.97■□□□□ 0.15
TRIM47-204ENST00000587339 MINOS1-NBL1R4GNA1 71 aa15.97■□□□□ 0.15
TRIM47-204ENST00000587339 UMAD1C9J7I0 102 aa15.96■□□□□ 0.15
TRIM47-204ENST00000587339 NPY1RP25929 384 aa15.96■□□□□ 0.15
TRIM47-204ENST00000587339 CD1BP29016 333 aa15.96■□□□□ 0.15
TRIM47-204ENST00000587339 AANATQ16613 207 aa15.96■□□□□ 0.15
TRIM47-204ENST00000587339 CCDC144NLQ6NUI1 221 aa15.96■□□□□ 0.15
TRIM47-204ENST00000587339 Q6ZRG5 221 aa15.96■□□□□ 0.15
TRIM47-204ENST00000587339 RNF5Q99942 180 aa15.96■□□□□ 0.15
TRIM47-204ENST00000587339 PARP11Q9NR21 331 aa15.96■□□□□ 0.15
TRIM47-204ENST00000587339 TPSG1Q9NRR2 321 aa15.96■□□□□ 0.15
TRIM47-204ENST00000587339 NDUFA4L2Q9NRX3 87 aa15.96■□□□□ 0.15
TRIM47-204ENST00000587339 FBN2P35556 2912 aa15.96■□□□□ 0.15
TRIM47-204ENST00000587339 MED13LQ71F56 2210 aa15.96■□□□□ 0.14
TRIM47-204ENST00000587339 VENTXO95231 258 aa15.96■□□□□ 0.14
TRIM47-204ENST00000587339 IFNA4P05014 189 aa15.96■□□□□ 0.14
TRIM47-204ENST00000587339 CNTFRP26992 372 aa15.96■□□□□ 0.14
TRIM47-204ENST00000587339 UBE2E1P51965 193 aa15.96■□□□□ 0.14
TRIM47-204ENST00000587339 PSG5Q15238 335 aa15.96■□□□□ 0.14
TRIM47-204ENST00000587339 HSD17B13Q7Z5P4 300 aaPredicted RBP15.96■□□□□ 0.14
TRIM47-204ENST00000587339 TMEM170AQ8WVE7 144 aa15.96■□□□□ 0.14
TRIM47-204ENST00000587339 RSG1Q9BU20 258 aa15.96■□□□□ 0.14
TRIM47-204ENST00000587339 HRH4Q9H3N8 390 aa15.96■□□□□ 0.14
TRIM47-204ENST00000587339 TRIM77I1YAP6 450 aa15.95■□□□□ 0.14
TRIM47-204ENST00000587339 CAMLGP49069 296 aa15.95■□□□□ 0.14
TRIM47-204ENST00000587339 HABP2Q14520 560 aaPredicted RBP15.95■□□□□ 0.14
TRIM47-204ENST00000587339 CFHR4Q92496 578 aa15.95■□□□□ 0.14
TRIM47-204ENST00000587339 TAF15Q92804 592 aaKnown RBP eCLIP15.95■□□□□ 0.14
TRIM47-204ENST00000587339 USP9YO00507 2555 aaPredicted RBP15.95■□□□□ 0.14
TRIM47-204ENST00000587339 OOSP1A8MZH6 123 aa15.94■□□□□ 0.14
TRIM47-204ENST00000587339 I3L521 148 aa15.94■□□□□ 0.14
TRIM47-204ENST00000587339 CA2P00918 260 aa15.94■□□□□ 0.14
TRIM47-204ENST00000587339 PAX6P26367 422 aa15.94■□□□□ 0.14
TRIM47-204ENST00000587339 FHITP49789 147 aa15.94■□□□□ 0.14
TRIM47-204ENST00000587339 ZNF616Q08AN1 781 aa15.94■□□□□ 0.14
TRIM47-204ENST00000587339 PJVKQ0ZLH3 352 aa15.94■□□□□ 0.14
TRIM47-204ENST00000587339 CLEC12BQ2HXU8 276 aa15.94■□□□□ 0.14
TRIM47-204ENST00000587339 VWC2Q2TAL6 325 aa15.94■□□□□ 0.14
TRIM47-204ENST00000587339 OR10W1Q8NGF6 305 aa15.94■□□□□ 0.14
TRIM47-204ENST00000587339 METTL1Q9UBP6 276 aaKnown RBP15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms