RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 NFYBP25208 207 aa6.3□□□□□ -1.4
VMP1-204ENST00000587259 DUTP33316 252 aaKnown RBP6.3□□□□□ -1.4
VMP1-204ENST00000587259 LPAR6P43657 344 aa6.3□□□□□ -1.4
VMP1-204ENST00000587259 RAB13P51153 203 aa6.3□□□□□ -1.4
VMP1-204ENST00000587259 HBG1P69891 147 aa6.3□□□□□ -1.4
VMP1-204ENST00000587259 HBG2P69892 147 aa6.3□□□□□ -1.4
VMP1-204ENST00000587259 LTC4SQ16873 150 aa6.3□□□□□ -1.4
VMP1-204ENST00000587259 C1orf122Q6ZSJ8 110 aa6.3□□□□□ -1.4
VMP1-204ENST00000587259 SLC25A48Q6ZT89 311 aaKnown RBP6.3□□□□□ -1.4
VMP1-204ENST00000587259 TCF23Q7RTU1 214 aa6.3□□□□□ -1.4
VMP1-204ENST00000587259 H2BFWTQ7Z2G1 175 aa6.3□□□□□ -1.4
VMP1-204ENST00000587259 FOXRED2Q8IWF2 684 aa6.3□□□□□ -1.4
VMP1-204ENST00000587259 BAP18Q8IXM2 172 aa6.3□□□□□ -1.4
VMP1-204ENST00000587259 LINC00311Q8N616 119 aa6.3□□□□□ -1.4
VMP1-204ENST00000587259 OR2C3Q8N628 320 aa6.3□□□□□ -1.4
VMP1-204ENST00000587259 TMEM86BQ8N661 226 aa6.3□□□□□ -1.4
VMP1-204ENST00000587259 ZNF439Q8NDP4 499 aa6.3□□□□□ -1.4
VMP1-204ENST00000587259 C8orf46Q8TAG6 207 aa6.3□□□□□ -1.4
VMP1-204ENST00000587259 CLCC1Q96S66 551 aa6.3□□□□□ -1.4
VMP1-204ENST00000587259 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.3□□□□□ -1.4
VMP1-204ENST00000587259 LYRM2Q9NU23 88 aaPredicted RBP6.3□□□□□ -1.4
VMP1-204ENST00000587259 MED9Q9NWA0 146 aa6.3□□□□□ -1.4
VMP1-204ENST00000587259 ONECUT1Q9UBC0 465 aa6.3□□□□□ -1.4
VMP1-204ENST00000587259 CACNG5Q9UF02 275 aa6.3□□□□□ -1.4
VMP1-204ENST00000587259 PFDN2Q9UHV9 154 aa6.3□□□□□ -1.4
VMP1-204ENST00000587259 RCL1Q9Y2P8 373 aaKnown RBP6.3□□□□□ -1.4
VMP1-204ENST00000587259 AMMECR1Q9Y4X0 333 aaPredicted RBP6.3□□□□□ -1.4
VMP1-204ENST00000587259 SESN1Q9Y6P5 492 aa6.3□□□□□ -1.4
VMP1-204ENST00000587259 TET2Q6N021 2002 aaPredicted RBP6.3□□□□□ -1.4
VMP1-204ENST00000587259 SAA2-SAA4A0A096LPE2 208 aa6.29□□□□□ -1.4
VMP1-204ENST00000587259 LINC00862A6NCI5 91 aa6.29□□□□□ -1.4
VMP1-204ENST00000587259 MARCH11A6NNE9 402 aa6.29□□□□□ -1.4
VMP1-204ENST00000587259 NUDT19A8MXV4 375 aa6.29□□□□□ -1.4
VMP1-204ENST00000587259 RNASEK-C17orf49H0YIS7 233 aa6.29□□□□□ -1.4
VMP1-204ENST00000587259 SYNGR2O43760 224 aa6.29□□□□□ -1.4
VMP1-204ENST00000587259 SSSCA1O60232 199 aa6.29□□□□□ -1.4
VMP1-204ENST00000587259 SAA2P0DJI9 122 aaPredicted RBP6.29□□□□□ -1.4
VMP1-204ENST00000587259 CAV2P51636 162 aa6.29□□□□□ -1.4
VMP1-204ENST00000587259 ZNF137PP52743 207 aa6.29□□□□□ -1.4
VMP1-204ENST00000587259 RPP30P78346 268 aaKnown RBP6.29□□□□□ -1.4
VMP1-204ENST00000587259 LY6EQ16553 131 aa6.29□□□□□ -1.4
VMP1-204ENST00000587259 ZNF585BQ52M93 769 aa6.29□□□□□ -1.4
VMP1-204ENST00000587259 UBAC2Q8NBM4 344 aa6.29□□□□□ -1.4
VMP1-204ENST00000587259 OR10X1Q8NGY0 326 aa6.29□□□□□ -1.4
VMP1-204ENST00000587259 OR9G1Q8NH87 305 aa6.29□□□□□ -1.4
VMP1-204ENST00000587259 ZNF596Q8TC21 504 aa6.29□□□□□ -1.4
VMP1-204ENST00000587259 MRAPQ8TCY5 172 aa6.29□□□□□ -1.4
VMP1-204ENST00000587259 RNF141Q8WVD5 230 aa6.29□□□□□ -1.4
VMP1-204ENST00000587259 DCTN5Q9BTE1 182 aa6.29□□□□□ -1.4
VMP1-204ENST00000587259 PARP12Q9H0J9 701 aaKnown RBP6.29□□□□□ -1.4
VMP1-204ENST00000587259 C19orf12Q9NSK7 152 aa6.29□□□□□ -1.4
VMP1-204ENST00000587259 ZNRD1Q9P1U0 126 aa6.29□□□□□ -1.4
VMP1-204ENST00000587259 RNF150Q9ULK6 438 aa6.29□□□□□ -1.4
VMP1-204ENST00000587259 NOTCH3Q9UM47 2321 aa6.29□□□□□ -1.4
VMP1-204ENST00000587259 KMT2CQ8NEZ4 4911 aaKnown RBP6.28□□□□□ -1.4
VMP1-204ENST00000587259 C17orf98A8MV24 154 aa6.28□□□□□ -1.4
VMP1-204ENST00000587259 FCGR3BO75015 233 aa6.28□□□□□ -1.4
VMP1-204ENST00000587259 S1PR2O95136 353 aa6.28□□□□□ -1.4
VMP1-204ENST00000587259 IGKV1-5P01602 117 aa6.28□□□□□ -1.4
VMP1-204ENST00000587259 LIPFP07098 398 aa6.28□□□□□ -1.4
VMP1-204ENST00000587259 FGF2P09038 288 aa6.28□□□□□ -1.4
VMP1-204ENST00000587259 IGHV1-8P0DP01 117 aa6.28□□□□□ -1.4
VMP1-204ENST00000587259 RAB5CP51148 216 aa6.28□□□□□ -1.4
VMP1-204ENST00000587259 PRRX1P54821 245 aa6.28□□□□□ -1.4
VMP1-204ENST00000587259 BPIFB3P59826 476 aa6.28□□□□□ -1.4
VMP1-204ENST00000587259 ERVFRD-1P60508 538 aa6.28□□□□□ -1.4
VMP1-204ENST00000587259 ZNF816Q0VGE8 651 aaPredicted RBP6.28□□□□□ -1.4
VMP1-204ENST00000587259 HABP2Q14520 560 aaPredicted RBP6.28□□□□□ -1.4
VMP1-204ENST00000587259 ZNF273Q14593 569 aa6.28□□□□□ -1.4
VMP1-204ENST00000587259 POU2AF1Q16633 256 aa6.28□□□□□ -1.4
VMP1-204ENST00000587259 NSUN5P1Q3KNT7 163 aa6.28□□□□□ -1.4
VMP1-204ENST00000587259 AARDQ4LEZ3 155 aa6.28□□□□□ -1.4
VMP1-204ENST00000587259 CT45A1Q5HYN5 189 aa6.28□□□□□ -1.4
VMP1-204ENST00000587259 PRAMEF5Q5TYX0 476 aa6.28□□□□□ -1.4
VMP1-204ENST00000587259 TMEM200BQ69YZ2 307 aa6.28□□□□□ -1.4
VMP1-204ENST00000587259 ALKAL2Q6UX46 152 aa6.28□□□□□ -1.4
VMP1-204ENST00000587259 ZNF833PQ6ZTB9 187 aa6.28□□□□□ -1.4
VMP1-204ENST00000587259 C5orf24Q7Z6I8 188 aa6.28□□□□□ -1.4
VMP1-204ENST00000587259 STPG2Q8N412 459 aa6.28□□□□□ -1.4
VMP1-204ENST00000587259 Q8N7P7 452 aa6.28□□□□□ -1.4
VMP1-204ENST00000587259 DMBX1Q8NFW5 382 aa6.28□□□□□ -1.4
VMP1-204ENST00000587259 OR52E5Q8NH55 327 aa6.28□□□□□ -1.4
VMP1-204ENST00000587259 CT45A3Q8NHU0 189 aa6.28□□□□□ -1.4
VMP1-204ENST00000587259 VSTM2AQ8TAG5 236 aa6.28□□□□□ -1.4
VMP1-204ENST00000587259 OSR1Q8TAX0 266 aaPredicted RBP6.28□□□□□ -1.4
VMP1-204ENST00000587259 GPR146Q96CH1 333 aa6.28□□□□□ -1.4
VMP1-204ENST00000587259 R3HDM4Q96D70 268 aa6.28□□□□□ -1.4
VMP1-204ENST00000587259 SMIM8Q96KF7 97 aa6.28□□□□□ -1.4
VMP1-204ENST00000587259 KRTAP4-8Q9BYQ9 185 aa6.28□□□□□ -1.4
VMP1-204ENST00000587259 C16orf95Q9H693 158 aa6.28□□□□□ -1.4
VMP1-204ENST00000587259 HSPB7Q9UBY9 170 aa6.28□□□□□ -1.4
VMP1-204ENST00000587259 FBXL17Q9UF56 701 aa6.28□□□□□ -1.4
VMP1-204ENST00000587259 VPREB3Q9UKI3 123 aa6.28□□□□□ -1.4
VMP1-204ENST00000587259 FAM96BQ9Y3D0 163 aa6.28□□□□□ -1.4
VMP1-204ENST00000587259 PLXNB1O43157 2135 aa6.28□□□□□ -1.4
VMP1-204ENST00000587259 RPS10-NUDT3A0A1W2PQS6 291 aa6.27□□□□□ -1.41
VMP1-204ENST00000587259 MSGN1A6NI15 193 aa6.27□□□□□ -1.41
VMP1-204ENST00000587259 LINC00473A8K010 186 aa6.27□□□□□ -1.41
VMP1-204ENST00000587259 M0R1W7 72 aa6.27□□□□□ -1.41
VMP1-204ENST00000587259 NPFFO15130 113 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms