RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 DDB2Q92466 427 aa8.76□□□□□ -1.01
LIG3-207ENST00000586119 SNAPC3Q92966 411 aa8.76□□□□□ -1.01
LIG3-207ENST00000586119 USMG5Q96IX5 58 aa8.76□□□□□ -1.01
LIG3-207ENST00000586119 TMEM68Q96MH6 324 aa8.76□□□□□ -1.01
LIG3-207ENST00000586119 KRTAP17-1Q9BYP8 105 aa8.76□□□□□ -1.01
LIG3-207ENST00000586119 S4R3C0 116 aa8.76□□□□□ -1.01
LIG3-207ENST00000586119 V9GYH0 126 aa8.76□□□□□ -1.01
LIG3-207ENST00000586119 HMX3A6NHT5 357 aa8.75□□□□□ -1.01
LIG3-207ENST00000586119 OR2J3O76001 311 aa8.75□□□□□ -1.01
LIG3-207ENST00000586119 OR2A4O95047 310 aa8.75□□□□□ -1.01
LIG3-207ENST00000586119 CRYZL1O95825 349 aa8.75□□□□□ -1.01
LIG3-207ENST00000586119 IGHV3-23P01764 117 aa8.75□□□□□ -1.01
LIG3-207ENST00000586119 EXOSC2Q13868 293 aaKnown RBP8.75□□□□□ -1.01
LIG3-207ENST00000586119 GVQW1Q8N7I0 195 aa8.75□□□□□ -1.01
LIG3-207ENST00000586119 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.75□□□□□ -1.01
LIG3-207ENST00000586119 OR52I2Q8NH67 350 aa8.75□□□□□ -1.01
LIG3-207ENST00000586119 S100ZQ8WXG8 99 aa8.75□□□□□ -1.01
LIG3-207ENST00000586119 CACNG8Q8WXS5 425 aa8.75□□□□□ -1.01
LIG3-207ENST00000586119 WDR89Q96FK6 387 aaPredicted RBP8.75□□□□□ -1.01
LIG3-207ENST00000586119 GINS4Q9BRT9 223 aa8.75□□□□□ -1.01
LIG3-207ENST00000586119 SRD5A3Q9H8P0 318 aa8.75□□□□□ -1.01
LIG3-207ENST00000586119 RBMX2Q9Y388 322 aaKnown RBP8.75□□□□□ -1.01
LIG3-207ENST00000586119 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.74□□□□□ -1.01
LIG3-207ENST00000586119 TRBV9A0A0B4J1U6 114 aa8.74□□□□□ -1.01
LIG3-207ENST00000586119 OR11H12B2RN74 326 aa8.74□□□□□ -1.01
LIG3-207ENST00000586119 E7EUB6 86 aa8.74□□□□□ -1.01
LIG3-207ENST00000586119 MPPED1O15442 326 aa8.74□□□□□ -1.01
LIG3-207ENST00000586119 JTBO76095 146 aa8.74□□□□□ -1.01
LIG3-207ENST00000586119 OR2C1O95371 312 aa8.74□□□□□ -1.01
LIG3-207ENST00000586119 DUTP33316 252 aaKnown RBP8.74□□□□□ -1.01
LIG3-207ENST00000586119 TAS2R19P59542 299 aa8.74□□□□□ -1.01
LIG3-207ENST00000586119 UBE2KP61086 200 aa8.74□□□□□ -1.01
LIG3-207ENST00000586119 ATP5G2Q06055 141 aa8.74□□□□□ -1.01
LIG3-207ENST00000586119 CDK10Q15131 360 aa8.74□□□□□ -1.01
LIG3-207ENST00000586119 GUCA2BQ16661 112 aa8.74□□□□□ -1.01
LIG3-207ENST00000586119 PYDC2Q56P42 97 aa8.74□□□□□ -1.01
LIG3-207ENST00000586119 LYSMD2Q8IV50 215 aa8.74□□□□□ -1.01
LIG3-207ENST00000586119 H1FOOQ8IZA3 346 aaPredicted RBP8.74□□□□□ -1.01
LIG3-207ENST00000586119 GDPD1Q8N9F7 314 aa8.74□□□□□ -1.01
LIG3-207ENST00000586119 TEX45Q8NA69 505 aa8.74□□□□□ -1.01
LIG3-207ENST00000586119 TMEM229BQ8NBD8 167 aa8.74□□□□□ -1.01
LIG3-207ENST00000586119 OR5H2Q8NGV7 314 aa8.74□□□□□ -1.01
LIG3-207ENST00000586119 DEDD2Q8WXF8 326 aa8.74□□□□□ -1.01
LIG3-207ENST00000586119 ZNF430Q9H8G1 570 aaPredicted RBP8.74□□□□□ -1.01
LIG3-207ENST00000586119 PEMTQ9UBM1 199 aa8.74□□□□□ -1.01
LIG3-207ENST00000586119 KLK11Q9UBX7 282 aa8.74□□□□□ -1.01
LIG3-207ENST00000586119 RBM7Q9Y580 266 aaKnown RBP8.74□□□□□ -1.01
LIG3-207ENST00000586119 MEIS3P1A6NDR6 274 aa8.73□□□□□ -1.01
LIG3-207ENST00000586119 C2orf70A6NJV1 201 aa8.73□□□□□ -1.01
LIG3-207ENST00000586119 FOLR2P14207 255 aa8.73□□□□□ -1.01
LIG3-207ENST00000586119 KIR2DS2P43631 304 aa8.73□□□□□ -1.01
LIG3-207ENST00000586119 RPL30P62888 115 aaKnown RBP8.73□□□□□ -1.01
LIG3-207ENST00000586119 ZNF79Q15937 498 aa8.73□□□□□ -1.01
LIG3-207ENST00000586119 RTL8BQ17RB0 113 aa8.73□□□□□ -1.01
LIG3-207ENST00000586119 VMA21Q3ZAQ7 101 aa8.73□□□□□ -1.01
LIG3-207ENST00000586119 OR2B11Q5JQS5 317 aa8.73□□□□□ -1.01
LIG3-207ENST00000586119 DHRS11Q6UWP2 260 aa8.73□□□□□ -1.01
LIG3-207ENST00000586119 VKORC1L1Q8N0U8 176 aa8.73□□□□□ -1.01
LIG3-207ENST00000586119 GIMAP1Q8WWP7 306 aa8.73□□□□□ -1.01
LIG3-207ENST00000586119 FAM210AQ96ND0 272 aa8.73□□□□□ -1.01
LIG3-207ENST00000586119 SRRQ9GZT4 340 aa8.73□□□□□ -1.01
LIG3-207ENST00000586119 A0A1B0GW64 132 aa8.72□□□□□ -1.01
LIG3-207ENST00000586119 FCGR3BO75015 233 aa8.72□□□□□ -1.01
LIG3-207ENST00000586119 TUSC2O75896 110 aa8.72□□□□□ -1.01
LIG3-207ENST00000586119 SLC22A5O76082 557 aa8.72□□□□□ -1.01
LIG3-207ENST00000586119 NDUFB8O95169 186 aa8.72□□□□□ -1.01
LIG3-207ENST00000586119 CD74P04233 296 aa8.72□□□□□ -1.01
LIG3-207ENST00000586119 SAA1P0DJI8 122 aaPredicted RBP8.72□□□□□ -1.01
LIG3-207ENST00000586119 MYOD1P15172 320 aa8.72□□□□□ -1.01
LIG3-207ENST00000586119 HLA-DMAP28067 261 aa8.72□□□□□ -1.01
LIG3-207ENST00000586119 AP3S2P59780 193 aa8.72□□□□□ -1.01
LIG3-207ENST00000586119 EWSR1Q01844 656 aaKnown RBP eCLIP8.72□□□□□ -1.01
LIG3-207ENST00000586119 MEF2DQ14814 521 aa8.72□□□□□ -1.01
LIG3-207ENST00000586119 MSMO1Q15800 293 aa8.72□□□□□ -1.01
LIG3-207ENST00000586119 RNASE10Q5GAN6 216 aaKnown RBP8.72□□□□□ -1.01
LIG3-207ENST00000586119 TMEM17Q86X19 198 aa8.72□□□□□ -1.01
LIG3-207ENST00000586119 ARRDC1Q8N5I2 433 aa8.72□□□□□ -1.01
LIG3-207ENST00000586119 TTC9CQ8N5M4 171 aa8.72□□□□□ -1.01
LIG3-207ENST00000586119 OR2K2Q8NGT1 345 aa8.72□□□□□ -1.01
LIG3-207ENST00000586119 DYNLRB2Q8TF09 96 aa8.72□□□□□ -1.01
LIG3-207ENST00000586119 SLC2A8Q9NY64 477 aa8.72□□□□□ -1.01
LIG3-207ENST00000586119 EHFQ9NZC4 300 aa8.72□□□□□ -1.01
LIG3-207ENST00000586119 OR2W1Q9Y3N9 320 aa8.72□□□□□ -1.01
LIG3-207ENST00000586119 FRAS1Q86XX4 4008 aa8.72□□□□□ -1.01
LIG3-207ENST00000586119 ANKRD20A5PA0PJZ0 165 aa8.71□□□□□ -1.02
LIG3-207ENST00000586119 FAM223BA6NKX1 122 aa8.71□□□□□ -1.02
LIG3-207ENST00000586119 TEX22C9J3V5 150 aa8.71□□□□□ -1.02
LIG3-207ENST00000586119 IGLV2-14P01704 120 aa8.71□□□□□ -1.02
LIG3-207ENST00000586119 PMP2P02689 132 aa8.71□□□□□ -1.02
LIG3-207ENST00000586119 IL6RP08887 468 aaPredicted RBP8.71□□□□□ -1.02
LIG3-207ENST00000586119 AKAIN1P0CW23 69 aa8.71□□□□□ -1.02
LIG3-207ENST00000586119 RRASP10301 218 aa8.71□□□□□ -1.02
LIG3-207ENST00000586119 FCGR2CP31995 323 aa8.71□□□□□ -1.02
LIG3-207ENST00000586119 HRH1P35367 487 aa8.71□□□□□ -1.02
LIG3-207ENST00000586119 BRWD1-AS2P59051 145 aa8.71□□□□□ -1.02
LIG3-207ENST00000586119 C15orf32Q32M92 178 aa8.71□□□□□ -1.02
LIG3-207ENST00000586119 RNASE12Q5GAN4 147 aaKnown RBP8.71□□□□□ -1.02
LIG3-207ENST00000586119 STEAP1BQ6NZ63 245 aa8.71□□□□□ -1.02
LIG3-207ENST00000586119 FAM223AQ8IWN6 122 aa8.71□□□□□ -1.02
LIG3-207ENST00000586119 MFSD4AQ8N468 514 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms