RNA–Protein interactions for RNA: ENST00000585799.5

SMARCA4-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,842 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-208ENST00000585799 HSPB7Q9UBY9 170 aa10.27□□□□□ -0.77
SMARCA4-208ENST00000585799 ZNF343Q6P1L6 599 aa10.27□□□□□ -0.77
SMARCA4-208ENST00000585799 ZNF788Q6ZQV5 615 aa10.27□□□□□ -0.77
SMARCA4-208ENST00000585799 FAM169BQ8N8A8 192 aa10.27□□□□□ -0.77
SMARCA4-208ENST00000585799 GATAD1Q8WUU5 269 aa10.27□□□□□ -0.77
SMARCA4-208ENST00000585799 IFI27L2Q9H2X8 130 aa10.27□□□□□ -0.77
SMARCA4-208ENST00000585799 VAX2Q9UIW0 290 aa10.27□□□□□ -0.77
SMARCA4-208ENST00000585799 IGLV3-9A0A075B6K5 115 aa10.26□□□□□ -0.77
SMARCA4-208ENST00000585799 PPIAL4CA0A0B4J2A2 164 aa10.26□□□□□ -0.77
SMARCA4-208ENST00000585799 C11orf94C9JXX5 98 aa10.26□□□□□ -0.77
SMARCA4-208ENST00000585799 C15orf65H3BRN8 121 aa10.26□□□□□ -0.77
SMARCA4-208ENST00000585799 KBTBD11O94819 623 aa10.26□□□□□ -0.77
SMARCA4-208ENST00000585799 THBDP07204 575 aa10.26□□□□□ -0.77
SMARCA4-208ENST00000585799 PPIAL4GP0DN37 164 aa10.26□□□□□ -0.77
SMARCA4-208ENST00000585799 MGST1P10620 155 aaKnown RBP10.26□□□□□ -0.77
SMARCA4-208ENST00000585799 OR10J1P30954 320 aa10.26□□□□□ -0.77
SMARCA4-208ENST00000585799 TMEM200BQ69YZ2 307 aa10.26□□□□□ -0.77
SMARCA4-208ENST00000585799 SLC35E3Q7Z769 313 aa10.26□□□□□ -0.77
SMARCA4-208ENST00000585799 ZNF383Q8NA42 475 aa10.26□□□□□ -0.77
SMARCA4-208ENST00000585799 PCGF1Q9BSM1 259 aa10.26□□□□□ -0.77
SMARCA4-208ENST00000585799 MYO18BQ8IUG5 2567 aa10.26□□□□□ -0.77
SMARCA4-208ENST00000585799 DMXL1Q9Y485 3027 aa10.26□□□□□ -0.77
SMARCA4-208ENST00000585799 TMEM178BH3BS89 294 aa10.26□□□□□ -0.77
SMARCA4-208ENST00000585799 IGKV1-16P04430 117 aa10.26□□□□□ -0.77
SMARCA4-208ENST00000585799 ORM2P19652 201 aa10.26□□□□□ -0.77
SMARCA4-208ENST00000585799 SUB1P53999 127 aaKnown RBP eCLIP10.26□□□□□ -0.777e-8■■■□□ 19.1
SMARCA4-208ENST00000585799 OR10W1Q8NGF6 305 aa10.26□□□□□ -0.77
SMARCA4-208ENST00000585799 SLX1AQ9BQ83 275 aa10.26□□□□□ -0.77
SMARCA4-208ENST00000585799 RPUSD1Q9UJJ7 312 aaKnown RBP10.26□□□□□ -0.77
SMARCA4-208ENST00000585799 COL8A2P25067 703 aa10.26□□□□□ -0.77
SMARCA4-208ENST00000585799 PRRX1P54821 245 aa10.26□□□□□ -0.77
SMARCA4-208ENST00000585799 RPL8P62917 257 aaKnown RBP10.26□□□□□ -0.77
SMARCA4-208ENST00000585799 FLI1Q01543 452 aaPredicted RBP10.26□□□□□ -0.77
SMARCA4-208ENST00000585799 ACSM6Q6P461 480 aa10.26□□□□□ -0.77
SMARCA4-208ENST00000585799 PNKDQ8N490 385 aa10.26□□□□□ -0.77
SMARCA4-208ENST00000585799 OR1L8Q8NGR8 309 aa10.26□□□□□ -0.77
SMARCA4-208ENST00000585799 C5orf30Q96GV9 206 aa10.26□□□□□ -0.77
SMARCA4-208ENST00000585799 NPCDR1Q9BY65 106 aa10.26□□□□□ -0.77
SMARCA4-208ENST00000585799 LINC00312Q9Y6C7 94 aa10.26□□□□□ -0.77
SMARCA4-208ENST00000585799 KHDC3LQ587J8 217 aa10.25□□□□□ -0.77
SMARCA4-208ENST00000585799 TEPPQ6URK8 271 aa10.25□□□□□ -0.77
SMARCA4-208ENST00000585799 NANPQ8TBE9 248 aa10.25□□□□□ -0.77
SMARCA4-208ENST00000585799 CARHSP1Q9Y2V2 147 aaKnown RBP10.25□□□□□ -0.77
SMARCA4-208ENST00000585799 ARHGAP32A7KAX9 2087 aa10.25□□□□□ -0.77
SMARCA4-208ENST00000585799 IGLV2-14P01704 120 aa10.25□□□□□ -0.77
SMARCA4-208ENST00000585799 OR10J4P0C629 311 aa10.25□□□□□ -0.77
SMARCA4-208ENST00000585799 TMEM241Q24JQ0 296 aa10.25□□□□□ -0.77
SMARCA4-208ENST00000585799 HAPLN4Q86UW8 402 aa10.25□□□□□ -0.77
SMARCA4-208ENST00000585799 UHRF2Q96PU4 802 aa10.25□□□□□ -0.77
SMARCA4-208ENST00000585799 NPVFQ9HCQ7 196 aa10.25□□□□□ -0.77
SMARCA4-208ENST00000585799 CD5P06127 495 aa10.25□□□□□ -0.77
SMARCA4-208ENST00000585799 SAA1P0DJI8 122 aaPredicted RBP10.25□□□□□ -0.77
SMARCA4-208ENST00000585799 C17orf58Q2M2W7 97 aa10.25□□□□□ -0.77
SMARCA4-208ENST00000585799 KCNIP2Q9NS61 270 aa10.25□□□□□ -0.77
SMARCA4-208ENST00000585799 MDFIC2A0A1B0GVS7 189 aa10.24□□□□□ -0.77
SMARCA4-208ENST00000585799 SRP19P09132 144 aaKnown RBP10.24□□□□□ -0.77
SMARCA4-208ENST00000585799 PSG5Q15238 335 aa10.24□□□□□ -0.77
SMARCA4-208ENST00000585799 MMDQ15546 238 aa10.24□□□□□ -0.77
SMARCA4-208ENST00000585799 NOTCH3Q9UM47 2321 aa10.24□□□□□ -0.77
SMARCA4-208ENST00000585799 COX7A2P2O60397 106 aa10.24□□□□□ -0.77
SMARCA4-208ENST00000585799 OR9G1Q8NH87 305 aa10.24□□□□□ -0.77
SMARCA4-208ENST00000585799 NEIL1Q96FI4 390 aaPredicted RBP10.24□□□□□ -0.77
SMARCA4-208ENST00000585799 PTPN13Q12923 2485 aa10.24□□□□□ -0.77
SMARCA4-208ENST00000585799 NBEAQ8NFP9 2946 aa10.24□□□□□ -0.77
SMARCA4-208ENST00000585799 SPINK4O60575 86 aa10.24□□□□□ -0.77
SMARCA4-208ENST00000585799 TDGF1P3P51864 188 aa10.24□□□□□ -0.77
SMARCA4-208ENST00000585799 SSTP61278 116 aa10.24□□□□□ -0.77
SMARCA4-208ENST00000585799 MEF2BQ02080 365 aaPredicted RBP10.24□□□□□ -0.77
SMARCA4-208ENST00000585799 MLANAQ16655 118 aa10.24□□□□□ -0.77
SMARCA4-208ENST00000585799 C9orf152Q5JTZ5 239 aa10.24□□□□□ -0.77
SMARCA4-208ENST00000585799 MRPL41Q8IXM3 137 aaKnown RBP10.24□□□□□ -0.77
SMARCA4-208ENST00000585799 RPP25LQ8N5L8 163 aaKnown RBP10.24□□□□□ -0.77
SMARCA4-208ENST00000585799 WDFY3Q8IZQ1 3526 aa10.23□□□□□ -0.77
SMARCA4-208ENST00000585799 IGFBP2P18065 325 aa10.23□□□□□ -0.77
SMARCA4-208ENST00000585799 GPR6P46095 362 aaPredicted RBP10.23□□□□□ -0.77
SMARCA4-208ENST00000585799 ICAM4Q14773 271 aa10.23□□□□□ -0.77
SMARCA4-208ENST00000585799 NUP37Q8NFH4 326 aa10.23□□□□□ -0.77
SMARCA4-208ENST00000585799 AGMATQ9BSE5 352 aa10.23□□□□□ -0.77
SMARCA4-208ENST00000585799 FKBP11Q9NYL4 201 aa10.23□□□□□ -0.77
SMARCA4-208ENST00000585799 YIF1AO95070 293 aa10.23□□□□□ -0.77
SMARCA4-208ENST00000585799 RBP4P02753 201 aa10.23□□□□□ -0.77
SMARCA4-208ENST00000585799 RHOBP62745 196 aa10.23□□□□□ -0.77
SMARCA4-208ENST00000585799 DIAPH2-AS1Q14236 149 aa10.23□□□□□ -0.77
SMARCA4-208ENST00000585799 SSX2Q16385 188 aa10.23□□□□□ -0.77
SMARCA4-208ENST00000585799 BSXQ3C1V8 233 aa10.23□□□□□ -0.77
SMARCA4-208ENST00000585799 CLDND2Q8NHS1 167 aa10.23□□□□□ -0.77
SMARCA4-208ENST00000585799 BLNKQ8WV28 456 aa10.23□□□□□ -0.77
SMARCA4-208ENST00000585799 IGFBPL1Q8WX77 278 aa10.23□□□□□ -0.77
SMARCA4-208ENST00000585799 CORO2AQ92828 525 aa10.23□□□□□ -0.77
SMARCA4-208ENST00000585799 NDUFB4O95168 129 aa10.23□□□□□ -0.77
SMARCA4-208ENST00000585799 CA7P43166 264 aa10.23□□□□□ -0.77
SMARCA4-208ENST00000585799 ZNF672Q499Z4 452 aaPredicted RBP10.23□□□□□ -0.77
SMARCA4-208ENST00000585799 TMEM14EPQ6UXP3 125 aa10.23□□□□□ -0.77
SMARCA4-208ENST00000585799 WASHC3Q9Y3C0 194 aa10.23□□□□□ -0.77
SMARCA4-208ENST00000585799 DYSFO75923 2080 aa10.22□□□□□ -0.77
SMARCA4-208ENST00000585799 ARL14EPLP0DKL9 152 aa10.22□□□□□ -0.77
SMARCA4-208ENST00000585799 RAB5AP20339 215 aa10.22□□□□□ -0.77
SMARCA4-208ENST00000585799 RAB13P51153 203 aa10.22□□□□□ -0.77
SMARCA4-208ENST00000585799 NCMAPQ5T1S8 102 aa10.22□□□□□ -0.77
SMARCA4-208ENST00000585799 WDR25Q64LD2 544 aaPredicted RBP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms