RNA–Protein interactions for RNA: ENST00000584760.1

SREBF1-223, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 2

Gene SREBF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-223	ENST00000584760	AREG	P15514	252 aa		10.19	□□□□□ -0.78
SREBF1-223	ENST00000584760	TMBIM6	P55061	237 aa		10.19	□□□□□ -0.78
SREBF1-223	ENST00000584760	TSPAN5	P62079	268 aa		10.19	□□□□□ -0.78
SREBF1-223	ENST00000584760	PHLDA2	Q53GA4	152 aa		10.19	□□□□□ -0.78
SREBF1-223	ENST00000584760	C19orf35	Q6ZS72	473 aa		10.19	□□□□□ -0.78
SREBF1-223	ENST00000584760	NECAP1	Q8NC96	275 aa		10.19	□□□□□ -0.78
SREBF1-223	ENST00000584760	DYNC2LI1	Q8TCX1	351 aa		10.19	□□□□□ -0.78
SREBF1-223	ENST00000584760	FCAMR	Q8WWV6	532 aa		10.19	□□□□□ -0.78
SREBF1-223	ENST00000584760	DGCR14	Q96DF8	476 aa	Known RBP	10.19	□□□□□ -0.78
SREBF1-223	ENST00000584760	ASCL2	Q99929	193 aa		10.19	□□□□□ -0.78
SREBF1-223	ENST00000584760	RSRP1	Q9BUV0	290 aa		10.19	□□□□□ -0.78
SREBF1-223	ENST00000584760	PEF1	Q9UBV8	284 aa	Known RBP	10.19	□□□□□ -0.78
SREBF1-223	ENST00000584760	KLK11	Q9UBX7	282 aa		10.19	□□□□□ -0.78
SREBF1-223	ENST00000584760	MTFP1	Q9UDX5	166 aa		10.19	□□□□□ -0.78
SREBF1-223	ENST00000584760	LSM4	Q9Y4Z0	139 aa	Known RBP	10.19	□□□□□ -0.78
SREBF1-223	ENST00000584760	MARCH11	A6NNE9	402 aa		10.18	□□□□□ -0.78
SREBF1-223	ENST00000584760		M0QYG6	137 aa		10.18	□□□□□ -0.78
SREBF1-223	ENST00000584760	CTRB1	P17538	263 aa		10.18	□□□□□ -0.78
SREBF1-223	ENST00000584760	TBP	P20226	339 aa		10.18	□□□□□ -0.78
SREBF1-223	ENST00000584760	PSMB6	P28072	239 aa		10.18	□□□□□ -0.78
SREBF1-223	ENST00000584760	RPL5	P46777	297 aa	Known RBP	10.18	□□□□□ -0.78
SREBF1-223	ENST00000584760	UCP3	P55916	312 aa		10.18	□□□□□ -0.78
SREBF1-223	ENST00000584760	OR2B8P	P59922	312 aa		10.18	□□□□□ -0.78
SREBF1-223	ENST00000584760	EXOSC2	Q13868	293 aa	Known RBP	10.18	□□□□□ -0.78
SREBF1-223	ENST00000584760	KLF5	Q13887	457 aa	Predicted RBP	10.18	□□□□□ -0.78
SREBF1-223	ENST00000584760	KLK9	Q2XQG4	91 aa		10.18	□□□□□ -0.78
SREBF1-223	ENST00000584760	C15orf32	Q32M92	178 aa		10.18	□□□□□ -0.78
SREBF1-223	ENST00000584760	ZNF585B	Q52M93	769 aa		10.18	□□□□□ -0.78
SREBF1-223	ENST00000584760	CTRB2	Q6GPI1	263 aa		10.18	□□□□□ -0.78
SREBF1-223	ENST00000584760	LHFPL1	Q86WI0	220 aa		10.18	□□□□□ -0.78
SREBF1-223	ENST00000584760	DMBX1	Q8NFW5	382 aa		10.18	□□□□□ -0.78
SREBF1-223	ENST00000584760	FANCD2OS	Q96PS1	177 aa		10.18	□□□□□ -0.78
SREBF1-223	ENST00000584760	KLK9	Q9UKQ9	250 aa		10.18	□□□□□ -0.78
SREBF1-223	ENST00000584760	IGLC7	A0M8Q6	106 aa		10.17	□□□□□ -0.78
SREBF1-223	ENST00000584760	DPPA5	A6NC42	116 aa		10.17	□□□□□ -0.78
SREBF1-223	ENST00000584760	BMPR1B	O00238	502 aa		10.17	□□□□□ -0.78
SREBF1-223	ENST00000584760	CTDSP2	O14595	271 aa		10.17	□□□□□ -0.78
SREBF1-223	ENST00000584760	RGS5	O15539	181 aa		10.17	□□□□□ -0.78
SREBF1-223	ENST00000584760	OR2J3	O76001	311 aa		10.17	□□□□□ -0.78
SREBF1-223	ENST00000584760	ERVK-16	P61578	105 aa		10.17	□□□□□ -0.78
SREBF1-223	ENST00000584760	ATP5G2	Q06055	141 aa		10.17	□□□□□ -0.78
SREBF1-223	ENST00000584760	RNASE10	Q5GAN6	216 aa	Known RBP	10.17	□□□□□ -0.78
SREBF1-223	ENST00000584760	LPCAT3	Q6P1A2	487 aa		10.17	□□□□□ -0.78
SREBF1-223	ENST00000584760	SLC38A6	Q8IZM9	456 aa		10.17	□□□□□ -0.78
SREBF1-223	ENST00000584760	CADM3	Q8N126	398 aa		10.17	□□□□□ -0.78
SREBF1-223	ENST00000584760	C15orf40	Q8WUR7	153 aa		10.17	□□□□□ -0.78
SREBF1-223	ENST00000584760	FAM212B	Q9NTI7	297 aa	Predicted RBP	10.17	□□□□□ -0.78
SREBF1-223	ENST00000584760	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	10.16	□□□□□ -0.78
SREBF1-223	ENST00000584760		H3BMQ9	156 aa		10.16	□□□□□ -0.78
SREBF1-223	ENST00000584760	GABARAP	H6UMI1	98 aa		10.16	□□□□□ -0.78
SREBF1-223	ENST00000584760	CD3D	P04234	171 aa		10.16	□□□□□ -0.78
SREBF1-223	ENST00000584760	REG1A	P05451	166 aa		10.16	□□□□□ -0.78
SREBF1-223	ENST00000584760	RPA2	P15927	270 aa		10.16	□□□□□ -0.78
SREBF1-223	ENST00000584760	SPN	P16150	400 aa		10.16	□□□□□ -0.78
SREBF1-223	ENST00000584760	LPAR6	P43657	344 aa		10.16	□□□□□ -0.78
SREBF1-223	ENST00000584760	SYNJ2BP	P57105	145 aa		10.16	□□□□□ -0.78
SREBF1-223	ENST00000584760	CASC10	Q5T4H9	136 aa		10.16	□□□□□ -0.78
SREBF1-223	ENST00000584760	IL34	Q6ZMJ4	242 aa		10.16	□□□□□ -0.78
SREBF1-223	ENST00000584760	TBC1D26	Q86UD7	250 aa		10.16	□□□□□ -0.78
SREBF1-223	ENST00000584760	ARRDC1	Q8N5I2	433 aa		10.16	□□□□□ -0.78
SREBF1-223	ENST00000584760	OR4D10	Q8NGI6	311 aa		10.16	□□□□□ -0.78
SREBF1-223	ENST00000584760	OR9G4	Q8NGQ1	327 aa		10.16	□□□□□ -0.78
SREBF1-223	ENST00000584760	OR6Q1	Q8NGQ2	317 aa		10.16	□□□□□ -0.78
SREBF1-223	ENST00000584760	ISOC1	Q96CN7	298 aa		10.16	□□□□□ -0.78
SREBF1-223	ENST00000584760	OR4C12	Q96R67	309 aa		10.16	□□□□□ -0.78
SREBF1-223	ENST00000584760	SRSF8	Q9BRL6	282 aa	Known RBP	10.16	□□□□□ -0.78
SREBF1-223	ENST00000584760	ELOVL1	Q9BW60	279 aa		10.16	□□□□□ -0.78
SREBF1-223	ENST00000584760	COMMD5	Q9GZQ3	224 aa		10.16	□□□□□ -0.78
SREBF1-223	ENST00000584760	SLIRP	Q9GZT3	109 aa	Known RBP	10.16	□□□□□ -0.78
SREBF1-223	ENST00000584760	GAR1	Q9NY12	217 aa	Known RBP	10.16	□□□□□ -0.78
SREBF1-223	ENST00000584760	DMRT1	Q9Y5R6	373 aa		10.16	□□□□□ -0.78
SREBF1-223	ENST00000584760	IGLV11-55	A0A075B6I3	123 aa		10.15	□□□□□ -0.78
SREBF1-223	ENST00000584760	LY86	O95711	162 aa		10.15	□□□□□ -0.78
SREBF1-223	ENST00000584760	DHFR	P00374	187 aa		10.15	□□□□□ -0.78
SREBF1-223	ENST00000584760	KRAS	P01116	189 aa		10.15	□□□□□ -0.78
SREBF1-223	ENST00000584760	IGLV1-51	P01701	117 aa		10.15	□□□□□ -0.78
SREBF1-223	ENST00000584760	CD74	P04233	296 aa		10.15	□□□□□ -0.78
SREBF1-223	ENST00000584760	S100G	P29377	79 aa		10.15	□□□□□ -0.78
SREBF1-223	ENST00000584760	G6PC	P35575	357 aa		10.15	□□□□□ -0.78
SREBF1-223	ENST00000584760	SSBP1	Q04837	148 aa	Known RBP	10.15	□□□□□ -0.78
SREBF1-223	ENST00000584760	RPEL1	Q2QD12	228 aa		10.15	□□□□□ -0.78
SREBF1-223	ENST00000584760	HAPLN4	Q86UW8	402 aa		10.15	□□□□□ -0.78
SREBF1-223	ENST00000584760	TMEM229B	Q8NBD8	167 aa		10.15	□□□□□ -0.78
SREBF1-223	ENST00000584760	MUC7	Q8TAX7	377 aa		10.15	□□□□□ -0.78
SREBF1-223	ENST00000584760	SMIM4	Q8WVI0	70 aa		10.15	□□□□□ -0.78
SREBF1-223	ENST00000584760	CCDC140	Q96MF4	163 aa		10.15	□□□□□ -0.78
SREBF1-223	ENST00000584760	QTRT1	Q9BXR0	403 aa	Known RBP	10.15	□□□□□ -0.78
SREBF1-223	ENST00000584760	FBXL7	Q9UJT9	491 aa		10.15	□□□□□ -0.78
SREBF1-223	ENST00000584760	TENM2	Q9NT68	2774 aa		10.14	□□□□□ -0.79
SREBF1-223	ENST00000584760	NOL3	O60936	208 aa	Known RBP	10.14	□□□□□ -0.79
SREBF1-223	ENST00000584760	NDUFB8	O95169	186 aa		10.14	□□□□□ -0.79
SREBF1-223	ENST00000584760	IGKV1-39	P01597	117 aa		10.14	□□□□□ -0.79
SREBF1-223	ENST00000584760	IGKV1D-39	P04432	117 aa		10.14	□□□□□ -0.79
SREBF1-223	ENST00000584760	IFNA6	P05013	189 aa		10.14	□□□□□ -0.79
SREBF1-223	ENST00000584760	GP9	P14770	177 aa		10.14	□□□□□ -0.79
SREBF1-223	ENST00000584760	PTBP1	P26599	531 aa	Known RBP eCLIP	10.14	□□□□□ -0.79
SREBF1-223	ENST00000584760	TAS2R19	P59542	299 aa		10.14	□□□□□ -0.79
SREBF1-223	ENST00000584760	RND3	P61587	244 aa		10.14	□□□□□ -0.79
SREBF1-223	ENST00000584760	MRPS10	P82664	201 aa	Known RBP	10.14	□□□□□ -0.79
SREBF1-223	ENST00000584760	FAM209B	Q5JX69	171 aa		10.14	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms