RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 HIST1H2BCP62807 126 aa11.07□□□□□ -0.64
RNF43-208ENST00000584437 HIST2H2BEQ16778 126 aa11.07□□□□□ -0.64
RNF43-208ENST00000584437 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.07□□□□□ -0.64
RNF43-208ENST00000584437 LY6G6FQ5SQ64 297 aa11.07□□□□□ -0.64
RNF43-208ENST00000584437 SP7Q8TDD2 431 aaPredicted RBP11.07□□□□□ -0.64
RNF43-208ENST00000584437 HIST1H2BHQ93079 126 aa11.07□□□□□ -0.64
RNF43-208ENST00000584437 HIST1H2BNQ99877 126 aa11.07□□□□□ -0.64
RNF43-208ENST00000584437 HIST1H2BMQ99879 126 aa11.07□□□□□ -0.64
RNF43-208ENST00000584437 BEX4Q9NWD9 120 aaPredicted RBP11.07□□□□□ -0.64
RNF43-208ENST00000584437 H3BTX0 84 aa11.07□□□□□ -0.64
RNF43-208ENST00000584437 PF4V1P10720 104 aa11.07□□□□□ -0.64
RNF43-208ENST00000584437 GPR183P32249 361 aa11.07□□□□□ -0.64
RNF43-208ENST00000584437 FOXL2P58012 376 aa11.07□□□□□ -0.64
RNF43-208ENST00000584437 ZNF124Q15973 351 aa11.07□□□□□ -0.64
RNF43-208ENST00000584437 FAM106AQ4KMX7 169 aa11.07□□□□□ -0.64
RNF43-208ENST00000584437 RNFT1Q5M7Z0 435 aa11.07□□□□□ -0.64
RNF43-208ENST00000584437 SRXN1Q9BYN0 137 aa11.07□□□□□ -0.64
RNF43-208ENST00000584437 NPPCP23582 126 aa11.07□□□□□ -0.64
RNF43-208ENST00000584437 SPRED2Q7Z698 418 aa11.07□□□□□ -0.64
RNF43-208ENST00000584437 CIARTQ8N365 385 aaPredicted RBP11.07□□□□□ -0.64
RNF43-208ENST00000584437 CACNG8Q8WXS5 425 aa11.07□□□□□ -0.64
RNF43-208ENST00000584437 SCARF2Q96GP6 870 aaPredicted RBP11.07□□□□□ -0.64
RNF43-208ENST00000584437 LOC101059948A0A1B0GTJ6 334 aa11.07□□□□□ -0.64
RNF43-208ENST00000584437 GCSAMLQ5JQS6 135 aa11.07□□□□□ -0.64
RNF43-208ENST00000584437 ARFGEF1Q9Y6D6 1849 aa11.07□□□□□ -0.64
RNF43-208ENST00000584437 OR4X2Q8NGF9 303 aa11.06□□□□□ -0.64
RNF43-208ENST00000584437 ZNF418Q8TF45 676 aaPredicted RBP11.06□□□□□ -0.64
RNF43-208ENST00000584437 TMEM171Q8WVE6 324 aa11.06□□□□□ -0.64
RNF43-208ENST00000584437 TMEM170BQ5T4T1 132 aa11.06□□□□□ -0.64
RNF43-208ENST00000584437 ST6GALNAC3Q8NDV1 305 aa11.06□□□□□ -0.64
RNF43-208ENST00000584437 CHODLQ9H9P2 273 aa11.06□□□□□ -0.64
RNF43-208ENST00000584437 TRAV9-2A0A087WT02 112 aa11.06□□□□□ -0.64
RNF43-208ENST00000584437 REG1AP05451 166 aa11.06□□□□□ -0.64
RNF43-208ENST00000584437 RRN3P1Q2M238 152 aa11.06□□□□□ -0.64
RNF43-208ENST00000584437 HEPN1Q6WQI6 88 aa11.06□□□□□ -0.64
RNF43-208ENST00000584437 ST6GALNAC6Q969X2 333 aa11.06□□□□□ -0.64
RNF43-208ENST00000584437 C18orf12Q96KH6 178 aa11.06□□□□□ -0.64
RNF43-208ENST00000584437 C18orf15Q96N68 181 aa11.06□□□□□ -0.64
RNF43-208ENST00000584437 CLEC7AQ9BXN2 247 aa11.06□□□□□ -0.64
RNF43-208ENST00000584437 TMEM242Q9NWH2 141 aa11.06□□□□□ -0.64
RNF43-208ENST00000584437 TPRP12270 2363 aaKnown RBP11.06□□□□□ -0.64
RNF43-208ENST00000584437 TFPI2P48307 235 aa11.06□□□□□ -0.64
RNF43-208ENST00000584437 CCL20P78556 96 aa11.06□□□□□ -0.64
RNF43-208ENST00000584437 ORMDL3Q8N138 153 aa11.06□□□□□ -0.64
RNF43-208ENST00000584437 HS3ST3B1Q9Y662 390 aa11.06□□□□□ -0.64
RNF43-208ENST00000584437 C12orf77C9JDV5 145 aa11.06□□□□□ -0.64
RNF43-208ENST00000584437 CA1P00915 261 aaPredicted RBP11.06□□□□□ -0.64
RNF43-208ENST00000584437 IGFBP2P18065 325 aa11.06□□□□□ -0.64
RNF43-208ENST00000584437 ZNF56Q15929 161 aa11.06□□□□□ -0.64
RNF43-208ENST00000584437 LINC00114Q6XXX2 140 aa11.06□□□□□ -0.64
RNF43-208ENST00000584437 FAM19A2Q8N3H0 131 aa11.06□□□□□ -0.64
RNF43-208ENST00000584437 OR5A1Q8NGJ0 315 aa11.06□□□□□ -0.64
RNF43-208ENST00000584437 MOSP00540 346 aa11.05□□□□□ -0.64
RNF43-208ENST00000584437 MESP2Q0VG99 397 aa11.05□□□□□ -0.64
RNF43-208ENST00000584437 FBLN7Q53RD9 439 aa11.05□□□□□ -0.64
RNF43-208ENST00000584437 NR2C2APQ86WQ0 139 aa11.05□□□□□ -0.64
RNF43-208ENST00000584437 SMRP1Q8NCR6 262 aa11.05□□□□□ -0.64
RNF43-208ENST00000584437 RAX2Q96IS3 184 aa11.05□□□□□ -0.64
RNF43-208ENST00000584437 MCM3APO60318 1980 aa11.05□□□□□ -0.64
RNF43-208ENST00000584437 ATP5G2Q06055 141 aa11.05□□□□□ -0.64
RNF43-208ENST00000584437 NRN1LQ496H8 165 aa11.05□□□□□ -0.64
RNF43-208ENST00000584437 FAM159AQ6UWV7 190 aa11.05□□□□□ -0.64
RNF43-208ENST00000584437 LEAP2Q969E1 77 aa11.05□□□□□ -0.64
RNF43-208ENST00000584437 PPIAL4CA0A0B4J2A2 164 aa11.05□□□□□ -0.64
RNF43-208ENST00000584437 FOXI3A8MTJ6 420 aaPredicted RBP11.05□□□□□ -0.64
RNF43-208ENST00000584437 H7C1H1 209 aa11.05□□□□□ -0.64
RNF43-208ENST00000584437 PPIAL4GP0DN37 164 aa11.05□□□□□ -0.64
RNF43-208ENST00000584437 EEF1AKMT3Q96AZ1 226 aa11.05□□□□□ -0.64
RNF43-208ENST00000584437 FOXC2Q99958 501 aa11.05□□□□□ -0.64
RNF43-208ENST00000584437 C1QL4Q86Z23 238 aa11.05□□□□□ -0.64
RNF43-208ENST00000584437 SCGB3A1Q96QR1 104 aa11.05□□□□□ -0.64
RNF43-208ENST00000584437 GP6Q9HCN6 339 aa11.05□□□□□ -0.64
RNF43-208ENST00000584437 OSTCQ9NRP0 149 aa11.05□□□□□ -0.64
RNF43-208ENST00000584437 TEX45Q8NA69 505 aa11.04□□□□□ -0.64
RNF43-208ENST00000584437 ZNF257Q9Y2Q1 563 aa11.04□□□□□ -0.64
RNF43-208ENST00000584437 TRAV24A0A0B4J272 114 aa11.04□□□□□ -0.64
RNF43-208ENST00000584437 H3BUT2 72 aa11.04□□□□□ -0.64
RNF43-208ENST00000584437 ADMP35318 185 aa11.04□□□□□ -0.64
RNF43-208ENST00000584437 SRSF3P84103 164 aaKnown RBP11.04□□□□□ -0.64
RNF43-208ENST00000584437 PMS2CLQ68D20 193 aa11.04□□□□□ -0.64
RNF43-208ENST00000584437 ANKRD31Q8N7Z5 1873 aa11.04□□□□□ -0.64
RNF43-208ENST00000584437 RNASEH2CQ8TDP1 164 aaKnown RBP11.04□□□□□ -0.64
RNF43-208ENST00000584437 TRBV24-1A0A075B6N3 115 aa11.04□□□□□ -0.64
RNF43-208ENST00000584437 SYNGR3O43761 229 aa11.04□□□□□ -0.64
RNF43-208ENST00000584437 IL9P15248 144 aa11.04□□□□□ -0.64
RNF43-208ENST00000584437 TFF2Q03403 129 aa11.04□□□□□ -0.64
RNF43-208ENST00000584437 OR10J3Q5JRS4 329 aa11.04□□□□□ -0.64
RNF43-208ENST00000584437 OR52E5Q8NH55 327 aa11.04□□□□□ -0.64
RNF43-208ENST00000584437 SNAI2O43623 268 aa11.04□□□□□ -0.64
RNF43-208ENST00000584437 CTSSP25774 331 aa11.04□□□□□ -0.64
RNF43-208ENST00000584437 WDR82Q6UXN9 313 aa11.04□□□□□ -0.64
RNF43-208ENST00000584437 MRAP2Q96G30 205 aa11.04□□□□□ -0.64
RNF43-208ENST00000584437 HIST1H2BLQ99880 126 aa11.04□□□□□ -0.64
RNF43-208ENST00000584437 LPAR2Q9HBW0 351 aa11.04□□□□□ -0.64
RNF43-208ENST00000584437 FOXD3Q9UJU5 478 aaPredicted RBP11.04□□□□□ -0.64
RNF43-208ENST00000584437 ZNHIT1O43257 154 aa11.03□□□□□ -0.64
RNF43-208ENST00000584437 COX6A1P12074 109 aa11.03□□□□□ -0.64
RNF43-208ENST00000584437 RPL39P5Q59GN2 51 aa11.03□□□□□ -0.64
RNF43-208ENST00000584437 C17orf98A8MV24 154 aa11.03□□□□□ -0.64
RNF43-208ENST00000584437 TM4SF5O14894 197 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms