RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 CHST1O43916 411 aa12.98□□□□□ -0.33
CDK5RAP3-228ENST00000583363 FGF2P09038 288 aa12.98□□□□□ -0.33
CDK5RAP3-228ENST00000583363 RPL8P62917 257 aaKnown RBP12.98□□□□□ -0.33
CDK5RAP3-228ENST00000583363 IL15RAQ13261 267 aa12.98□□□□□ -0.33
CDK5RAP3-228ENST00000583363 PLGLAQ15195 96 aa12.98□□□□□ -0.33
CDK5RAP3-228ENST00000583363 AARDQ4LEZ3 155 aa12.98□□□□□ -0.33
CDK5RAP3-228ENST00000583363 THOC7Q6I9Y2 204 aaKnown RBP12.98□□□□□ -0.33
CDK5RAP3-228ENST00000583363 FOXRED2Q8IWF2 684 aa12.98□□□□□ -0.33
CDK5RAP3-228ENST00000583363 ZBTB8BQ8NAP8 495 aaPredicted RBP12.98□□□□□ -0.33
CDK5RAP3-228ENST00000583363 WDR89Q96FK6 387 aaPredicted RBP12.98□□□□□ -0.33
CDK5RAP3-228ENST00000583363 CLCC1Q96S66 551 aa12.98□□□□□ -0.33
CDK5RAP3-228ENST00000583363 ZNF436Q9C0F3 470 aaPredicted RBP12.98□□□□□ -0.33
CDK5RAP3-228ENST00000583363 FKBP11Q9NYL4 201 aa12.98□□□□□ -0.33
CDK5RAP3-228ENST00000583363 GSKIPQ9P0R6 139 aa12.98□□□□□ -0.33
CDK5RAP3-228ENST00000583363 PRNDQ9UKY0 176 aa12.98□□□□□ -0.33
CDK5RAP3-228ENST00000583363 FOXA2Q9Y261 457 aaPredicted RBP12.98□□□□□ -0.33
CDK5RAP3-228ENST00000583363 C15orf61A6NNL5 157 aa12.97□□□□□ -0.33
CDK5RAP3-228ENST00000583363 CLDN34H7C241 214 aa12.97□□□□□ -0.33
CDK5RAP3-228ENST00000583363 M0QZK8 103 aa12.97□□□□□ -0.33
CDK5RAP3-228ENST00000583363 MAS1LP35410 378 aa12.97□□□□□ -0.33
CDK5RAP3-228ENST00000583363 ZNF429Q86V71 674 aa12.97□□□□□ -0.33
CDK5RAP3-228ENST00000583363 OR4D5Q8NGN0 318 aa12.97□□□□□ -0.33
CDK5RAP3-228ENST00000583363 OR1S1Q8NH92 325 aa12.97□□□□□ -0.33
CDK5RAP3-228ENST00000583363 QTRT1Q9BXR0 403 aaKnown RBP12.97□□□□□ -0.33
CDK5RAP3-228ENST00000583363 CHIAQ9BZP6 476 aa12.97□□□□□ -0.33
CDK5RAP3-228ENST00000583363 NMES1Q9C002 83 aa12.97□□□□□ -0.33
CDK5RAP3-228ENST00000583363 ESM1Q9NQ30 184 aa12.97□□□□□ -0.33
CDK5RAP3-228ENST00000583363 TMEM14BQ9NUH8 114 aa12.97□□□□□ -0.33
CDK5RAP3-228ENST00000583363 OR51B2Q9Y5P1 312 aa12.97□□□□□ -0.33
CDK5RAP3-228ENST00000583363 PLXNB1O43157 2135 aa12.97□□□□□ -0.33
CDK5RAP3-228ENST00000583363 TEX50A0A1B0GTY4 177 aa12.96□□□□□ -0.33
CDK5RAP3-228ENST00000583363 DNAJC9-AS1A6NH13 148 aa12.96□□□□□ -0.33
CDK5RAP3-228ENST00000583363 ST8SIA3O43173 380 aa12.96□□□□□ -0.33
CDK5RAP3-228ENST00000583363 RBMXL2O75526 392 aaKnown RBP12.96□□□□□ -0.33
CDK5RAP3-228ENST00000583363 HLA-DRB1P01911 266 aa12.96□□□□□ -0.33
CDK5RAP3-228ENST00000583363 MYOD1P15172 320 aa12.96□□□□□ -0.33
CDK5RAP3-228ENST00000583363 OR2B8PP59922 312 aa12.96□□□□□ -0.33
CDK5RAP3-228ENST00000583363 HSPE1P61604 102 aaKnown RBP12.96□□□□□ -0.33
CDK5RAP3-228ENST00000583363 SSBP2P81877 361 aaPredicted RBP12.96□□□□□ -0.33
CDK5RAP3-228ENST00000583363 CYCSP99999 105 aaKnown RBP12.96□□□□□ -0.33
CDK5RAP3-228ENST00000583363 ID3Q02535 119 aa12.96□□□□□ -0.33
CDK5RAP3-228ENST00000583363 CXorf66Q5JRM2 361 aaPredicted RBP12.96□□□□□ -0.33
CDK5RAP3-228ENST00000583363 ZNF562Q6V9R5 426 aa12.96□□□□□ -0.33
CDK5RAP3-228ENST00000583363 OR52E5Q8NH55 327 aa12.96□□□□□ -0.33
CDK5RAP3-228ENST00000583363 DUX5Q96PT3 197 aa12.96□□□□□ -0.33
CDK5RAP3-228ENST00000583363 PDCD10Q9BUL8 212 aa12.96□□□□□ -0.33
CDK5RAP3-228ENST00000583363 CA2P00918 260 aa12.95□□□□□ -0.34
CDK5RAP3-228ENST00000583363 HILS1P60008 231 aa12.95□□□□□ -0.34
CDK5RAP3-228ENST00000583363 BLCAPP62952 87 aa12.95□□□□□ -0.34
CDK5RAP3-228ENST00000583363 CX3CL1P78423 397 aa12.95□□□□□ -0.34
CDK5RAP3-228ENST00000583363 PDLIM3Q53GG5 364 aaPredicted RBP12.95□□□□□ -0.34
CDK5RAP3-228ENST00000583363 OR1L8Q8NGR8 309 aa12.95□□□□□ -0.34
CDK5RAP3-228ENST00000583363 ASB13Q8WXK3 278 aa12.95□□□□□ -0.34
CDK5RAP3-228ENST00000583363 FYTTD1Q96QD9 318 aaKnown RBP12.95□□□□□ -0.34
CDK5RAP3-228ENST00000583363 CACFD1Q9UGQ2 172 aa12.95□□□□□ -0.34
CDK5RAP3-228ENST00000583363 ZNF257Q9Y2Q1 563 aa12.95□□□□□ -0.34
CDK5RAP3-228ENST00000583363 IGHV7-81A0A0B4J1V7 117 aa12.94□□□□□ -0.34
CDK5RAP3-228ENST00000583363 SH2D7A6NKC9 451 aaPredicted RBP12.94□□□□□ -0.34
CDK5RAP3-228ENST00000583363 FAM90A26D6RGX4 464 aa12.94□□□□□ -0.34
CDK5RAP3-228ENST00000583363 E7EUB6 86 aa12.94□□□□□ -0.34
CDK5RAP3-228ENST00000583363 GPR137BO60478 399 aa12.94□□□□□ -0.34
CDK5RAP3-228ENST00000583363 ACTL6BO94805 426 aa12.94□□□□□ -0.34
CDK5RAP3-228ENST00000583363 OPN1MWP04001 364 aa12.94□□□□□ -0.34
CDK5RAP3-228ENST00000583363 GIPP09681 153 aaPredicted RBP12.94□□□□□ -0.34
CDK5RAP3-228ENST00000583363 OPN1MW2P0DN77 364 aa12.94□□□□□ -0.34
CDK5RAP3-228ENST00000583363 OPN1MW3P0DN78 364 aa12.94□□□□□ -0.34
CDK5RAP3-228ENST00000583363 NKX2-1P43699 371 aaPredicted RBP12.94□□□□□ -0.34
CDK5RAP3-228ENST00000583363 COMPP49747 757 aaPredicted RBP12.94□□□□□ -0.34
CDK5RAP3-228ENST00000583363 SPCS3P61009 180 aa12.94□□□□□ -0.34
CDK5RAP3-228ENST00000583363 CD83Q01151 205 aa12.94□□□□□ -0.34
CDK5RAP3-228ENST00000583363 FXYD3Q14802 87 aa12.94□□□□□ -0.34
CDK5RAP3-228ENST00000583363 TNXAQ16473 311 aa12.94□□□□□ -0.34
CDK5RAP3-228ENST00000583363 OR5B3Q8NH48 314 aa12.94□□□□□ -0.34
CDK5RAP3-228ENST00000583363 JMJD8Q96S16 334 aa12.94□□□□□ -0.34
CDK5RAP3-228ENST00000583363 COMMD5Q9GZQ3 224 aa12.94□□□□□ -0.34
CDK5RAP3-228ENST00000583363 NDUFA4L2Q9NRX3 87 aa12.94□□□□□ -0.34
CDK5RAP3-228ENST00000583363 HSPB7Q9UBY9 170 aa12.94□□□□□ -0.34
CDK5RAP3-228ENST00000583363 TET2Q6N021 2002 aaPredicted RBP12.93□□□□□ -0.34
CDK5RAP3-228ENST00000583363 CGB1A6NKQ9 187 aa12.93□□□□□ -0.34
CDK5RAP3-228ENST00000583363 NXPH3O95157 252 aa12.93□□□□□ -0.34
CDK5RAP3-228ENST00000583363 CNIH1O95406 144 aa12.93□□□□□ -0.34
CDK5RAP3-228ENST00000583363 IFNA17P01571 189 aa12.93□□□□□ -0.34
CDK5RAP3-228ENST00000583363 MBPP02686 304 aaPredicted RBP12.93□□□□□ -0.34
CDK5RAP3-228ENST00000583363 GNB1P62873 340 aa12.93□□□□□ -0.34
CDK5RAP3-228ENST00000583363 TNFRSF9Q07011 255 aa12.93□□□□□ -0.34
CDK5RAP3-228ENST00000583363 ST6GAL2Q96JF0 529 aa12.93□□□□□ -0.34
CDK5RAP3-228ENST00000583363 HSPB9Q9BQS6 159 aa12.93□□□□□ -0.34
CDK5RAP3-228ENST00000583363 A0A1B0GW64 132 aa12.92□□□□□ -0.34
CDK5RAP3-228ENST00000583363 LINC01548A6NM66 108 aa12.92□□□□□ -0.34
CDK5RAP3-228ENST00000583363 RNASE1P07998 156 aaKnown RBP12.92□□□□□ -0.34
CDK5RAP3-228ENST00000583363 RPL27AP46776 148 aaKnown RBP12.92□□□□□ -0.34
CDK5RAP3-228ENST00000583363 RAP2BP61225 183 aa12.92□□□□□ -0.34
CDK5RAP3-228ENST00000583363 C10orf55Q5SWW7 151 aa12.92□□□□□ -0.34
CDK5RAP3-228ENST00000583363 Q6ZS46 218 aa12.92□□□□□ -0.34
CDK5RAP3-228ENST00000583363 RBKSQ9H477 322 aa12.92□□□□□ -0.34
CDK5RAP3-228ENST00000583363 RANGRFQ9HD47 186 aaPredicted RBP12.92□□□□□ -0.34
CDK5RAP3-228ENST00000583363 MSGN1A6NI15 193 aa12.91□□□□□ -0.34
CDK5RAP3-228ENST00000583363 K7EPK0 472 aa12.91□□□□□ -0.34
CDK5RAP3-228ENST00000583363 TCF21O43680 179 aa12.91□□□□□ -0.34
CDK5RAP3-228ENST00000583363 MED6O75586 246 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms