RNA–Protein interactions for RNA: ENST00000583277.1

SENP3-208, Transcript of SUMO specific peptidase 3, humanhuman

TSL 2

Gene SENP3, Length 1,578 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-208ENST00000583277 CLCC1Q96S66 551 aa11.73□□□□□ -0.53
SENP3-208ENST00000583277 C1RLQ9NZP8 487 aa11.73□□□□□ -0.53
SENP3-208ENST00000583277 METTL1Q9UBP6 276 aaKnown RBP11.73□□□□□ -0.53
SENP3-208ENST00000583277 SIGLEC9Q9Y336 463 aa11.73□□□□□ -0.53
SENP3-208ENST00000583277 OR51B2Q9Y5P1 312 aa11.73□□□□□ -0.53
SENP3-208ENST00000583277 WSB1Q9Y6I7 421 aa11.73□□□□□ -0.53
SENP3-208ENST00000583277 CEBPZOSA8MTT3 80 aa11.72□□□□□ -0.53
SENP3-208ENST00000583277 CHST1O43916 411 aa11.72□□□□□ -0.53
SENP3-208ENST00000583277 CRYGBP07316 175 aa11.72□□□□□ -0.53
SENP3-208ENST00000583277 C4BPBP20851 252 aa11.72□□□□□ -0.53
SENP3-208ENST00000583277 CNTFRP26992 372 aa11.72□□□□□ -0.53
SENP3-208ENST00000583277 MAS1LP35410 378 aa11.72□□□□□ -0.53
SENP3-208ENST00000583277 P2RY1P47900 373 aa11.72□□□□□ -0.53
SENP3-208ENST00000583277 TAS2R30P59541 319 aa11.72□□□□□ -0.53
SENP3-208ENST00000583277 HSPE1P61604 102 aaKnown RBP11.72□□□□□ -0.53
SENP3-208ENST00000583277 PLGLAQ15195 96 aa11.72□□□□□ -0.53
SENP3-208ENST00000583277 ACOT7LQ6ZUV0 252 aa11.72□□□□□ -0.53
SENP3-208ENST00000583277 C9orf62Q8N4C0 152 aa11.72□□□□□ -0.53
SENP3-208ENST00000583277 COMMD5Q9GZQ3 224 aa11.72□□□□□ -0.53
SENP3-208ENST00000583277 MFFQ9GZY8 342 aa11.72□□□□□ -0.53
SENP3-208ENST00000583277 RBKSQ9H477 322 aa11.72□□□□□ -0.53
SENP3-208ENST00000583277 C11orf1Q9H5F2 150 aa11.72□□□□□ -0.53
SENP3-208ENST00000583277 ZNF430Q9H8G1 570 aaPredicted RBP11.72□□□□□ -0.53
SENP3-208ENST00000583277 TCF19Q9Y242 345 aa11.72□□□□□ -0.53
SENP3-208ENST00000583277 ACTL6BO94805 426 aa11.71□□□□□ -0.53
SENP3-208ENST00000583277 OR2F2O95006 317 aa11.71□□□□□ -0.53
SENP3-208ENST00000583277 CD24P25063 80 aa11.71□□□□□ -0.53
SENP3-208ENST00000583277 RPL23AP62750 156 aaKnown RBP11.71□□□□□ -0.53
SENP3-208ENST00000583277 KRTAP1-1Q07627 177 aa11.71□□□□□ -0.53
SENP3-208ENST00000583277 OR2F1Q13607 317 aa11.71□□□□□ -0.53
SENP3-208ENST00000583277 HNF4GQ14541 408 aa11.71□□□□□ -0.53
SENP3-208ENST00000583277 PRSS8Q16651 343 aa11.71□□□□□ -0.53
SENP3-208ENST00000583277 PPP1R27Q86WC6 154 aa11.71□□□□□ -0.53
SENP3-208ENST00000583277 OR1L8Q8NGR8 309 aa11.71□□□□□ -0.53
SENP3-208ENST00000583277 DTD1Q8TEA8 209 aa11.71□□□□□ -0.53
SENP3-208ENST00000583277 AQP10Q96PS8 301 aa11.71□□□□□ -0.53
SENP3-208ENST00000583277 TPSG1Q9NRR2 321 aa11.71□□□□□ -0.53
SENP3-208ENST00000583277 LYRM2Q9NU23 88 aaPredicted RBP11.71□□□□□ -0.53
SENP3-208ENST00000583277 HSPB11Q9Y547 144 aa11.71□□□□□ -0.53
SENP3-208ENST00000583277 A0A0D9SG52 128 aa11.71□□□□□ -0.54
SENP3-208ENST00000583277 TSC22D2O75157 780 aa11.71□□□□□ -0.54
SENP3-208ENST00000583277 F2RL1P55085 397 aa11.71□□□□□ -0.54
SENP3-208ENST00000583277 SMIM8Q96KF7 97 aa11.71□□□□□ -0.54
SENP3-208ENST00000583277 SSX3Q99909 188 aa11.71□□□□□ -0.54
SENP3-208ENST00000583277 FBXL15Q9H469 300 aa11.71□□□□□ -0.54
SENP3-208ENST00000583277 PLEKHA3Q9HB20 300 aa11.71□□□□□ -0.54
SENP3-208ENST00000583277 ENY2Q9NPA8 101 aa11.71□□□□□ -0.54
SENP3-208ENST00000583277 MXRA5Q9NR99 2828 aa11.7□□□□□ -0.54
SENP3-208ENST00000583277 RNF222A6NCQ9 220 aa11.7□□□□□ -0.54
SENP3-208ENST00000583277 IAPPP10997 89 aa11.7□□□□□ -0.54
SENP3-208ENST00000583277 HOXA1P49639 335 aaPredicted RBP11.7□□□□□ -0.54
SENP3-208ENST00000583277 CAV2P51636 162 aa11.7□□□□□ -0.54
SENP3-208ENST00000583277 PRCDQ00LT1 54 aa11.7□□□□□ -0.54
SENP3-208ENST00000583277 C5orf64Q2M2E5 130 aa11.7□□□□□ -0.54
SENP3-208ENST00000583277 FAM120AOSQ5T036 256 aa11.7□□□□□ -0.54
SENP3-208ENST00000583277 MRPL41Q8IXM3 137 aaKnown RBP11.7□□□□□ -0.54
SENP3-208ENST00000583277 OR2C3Q8N628 320 aa11.7□□□□□ -0.54
SENP3-208ENST00000583277 SLC25A31Q9H0C2 315 aa11.7□□□□□ -0.54
SENP3-208ENST00000583277 HIPK2Q9H2X6 1198 aa11.7□□□□□ -0.54
SENP3-208ENST00000583277 ZC4H2Q9NQZ6 224 aa11.7□□□□□ -0.54
SENP3-208ENST00000583277 SONP18583 2426 aaKnown RBP11.69□□□□□ -0.54
SENP3-208ENST00000583277 PLXNB1O43157 2135 aa11.69□□□□□ -0.54
SENP3-208ENST00000583277 TEX50A0A1B0GTY4 177 aa11.69□□□□□ -0.54
SENP3-208ENST00000583277 NCBP2LA6PVI3 153 aaKnown RBP11.69□□□□□ -0.54
SENP3-208ENST00000583277 CXCL2P19875 107 aa11.69□□□□□ -0.54
SENP3-208ENST00000583277 HNF1AP20823 631 aa11.69□□□□□ -0.54
SENP3-208ENST00000583277 RPL12P30050 165 aaKnown RBP11.69□□□□□ -0.54
SENP3-208ENST00000583277 LGALSLQ3ZCW2 172 aaPredicted RBP11.69□□□□□ -0.54
SENP3-208ENST00000583277 LAMTOR1Q6IAA8 161 aa11.69□□□□□ -0.54
SENP3-208ENST00000583277 SPNS3Q6ZMD2 512 aa11.69□□□□□ -0.54
SENP3-208ENST00000583277 KCNRGQ8N5I3 272 aa11.69□□□□□ -0.54
SENP3-208ENST00000583277 ZDHHC16Q969W1 377 aa11.69□□□□□ -0.54
SENP3-208ENST00000583277 PLSCR3Q9NRY6 295 aa11.69□□□□□ -0.54
SENP3-208ENST00000583277 PSENENQ9NZ42 101 aa11.69□□□□□ -0.54
SENP3-208ENST00000583277 PITPNC1Q9UKF7 332 aa11.69□□□□□ -0.54
SENP3-208ENST00000583277 A0A1W2PN81 502 aa11.68□□□□□ -0.54
SENP3-208ENST00000583277 SCAF4O95104 1147 aaKnown RBP11.68□□□□□ -0.54
SENP3-208ENST00000583277 TMEM50AO95807 157 aa11.68□□□□□ -0.54
SENP3-208ENST00000583277 HKR1P10072 659 aa11.68□□□□□ -0.54
SENP3-208ENST00000583277 CHRNA7P36544 502 aa11.68□□□□□ -0.54
SENP3-208ENST00000583277 COMPP49747 757 aaPredicted RBP11.68□□□□□ -0.54
SENP3-208ENST00000583277 AP2S1P53680 142 aaPredicted RBP11.68□□□□□ -0.54
SENP3-208ENST00000583277 PAX9P55771 341 aa11.68□□□□□ -0.54
SENP3-208ENST00000583277 RPP30P78346 268 aaKnown RBP11.68□□□□□ -0.54
SENP3-208ENST00000583277 BAXQ07812 192 aa11.68□□□□□ -0.54
SENP3-208ENST00000583277 TNXAQ16473 311 aa11.68□□□□□ -0.54
SENP3-208ENST00000583277 MRGPRG-AS1Q2M3A8 158 aa11.68□□□□□ -0.54
SENP3-208ENST00000583277 FBLN7Q53RD9 439 aa11.68□□□□□ -0.54
SENP3-208ENST00000583277 SPINK9Q5DT21 86 aa11.68□□□□□ -0.54
SENP3-208ENST00000583277 STX12Q86Y82 276 aa11.68□□□□□ -0.54
SENP3-208ENST00000583277 HINT2Q9BX68 163 aa11.68□□□□□ -0.54
SENP3-208ENST00000583277 ARL6Q9H0F7 186 aa11.68□□□□□ -0.54
SENP3-208ENST00000583277 NDUFA4L2Q9NRX3 87 aa11.68□□□□□ -0.54
SENP3-208ENST00000583277 MOB4Q9Y3A3 225 aa11.68□□□□□ -0.54
SENP3-208ENST00000583277 MSGN1A6NI15 193 aa11.67□□□□□ -0.54
SENP3-208ENST00000583277 INS-IGF2F8WCM5 200 aa11.67□□□□□ -0.54
SENP3-208ENST00000583277 H3BUX3 64 aa11.67□□□□□ -0.54
SENP3-208ENST00000583277 S100A11P31949 105 aa11.67□□□□□ -0.54
SENP3-208ENST00000583277 VDAC2P45880 294 aaPredicted RBP11.67□□□□□ -0.54
SENP3-208ENST00000583277 RPL27AP46776 148 aaKnown RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms