RNA–Protein interactions for RNA: ENST00000582448.5

SS18-221, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-221ENST00000582448 C8orf31Q8N9H6 132 aa8.26□□□□□ -1.09
SS18-221ENST00000582448 OR4D5Q8NGN0 318 aa8.26□□□□□ -1.09
SS18-221ENST00000582448 OR10X1Q8NGY0 326 aa8.26□□□□□ -1.09
SS18-221ENST00000582448 ARPC5LQ9BPX5 153 aa8.26□□□□□ -1.09
SS18-221ENST00000582448 AIFM2Q9BRQ8 373 aa8.26□□□□□ -1.09
SS18-221ENST00000582448 IFI27L2Q9H2X8 130 aa8.26□□□□□ -1.09
SS18-221ENST00000582448 CACFD1Q9UGQ2 172 aa8.26□□□□□ -1.09
SS18-221ENST00000582448 UBQLN2Q9UHD9 624 aa8.26□□□□□ -1.09
SS18-221ENST00000582448 MMP24Q9Y5R2 645 aa8.26□□□□□ -1.09
SS18-221ENST00000582448 U3KQ87 197 aa8.26□□□□□ -1.09
SS18-221ENST00000582448 PPIAL4CA0A0B4J2A2 164 aa8.25□□□□□ -1.09
SS18-221ENST00000582448 GPR137BO60478 399 aa8.25□□□□□ -1.09
SS18-221ENST00000582448 RBMXL2O75526 392 aaKnown RBP8.25□□□□□ -1.09
SS18-221ENST00000582448 HPRT1P00492 218 aa8.25□□□□□ -1.09
SS18-221ENST00000582448 KRASP01116 189 aa8.25□□□□□ -1.09
SS18-221ENST00000582448 IGHV3-7P01780 117 aa8.25□□□□□ -1.09
SS18-221ENST00000582448 RBP4P02753 201 aa8.25□□□□□ -1.09
SS18-221ENST00000582448 LIPFP07098 398 aa8.25□□□□□ -1.09
SS18-221ENST00000582448 PPIAL4GP0DN37 164 aa8.25□□□□□ -1.09
SS18-221ENST00000582448 IGHV4-38-2P0DP08 117 aa8.25□□□□□ -1.09
SS18-221ENST00000582448 MMP9P14780 707 aa8.25□□□□□ -1.09
SS18-221ENST00000582448 CCL3L1P16619 93 aa8.25□□□□□ -1.09
SS18-221ENST00000582448 RPL12P30050 165 aaKnown RBP8.25□□□□□ -1.09
SS18-221ENST00000582448 DUTP33316 252 aaKnown RBP8.25□□□□□ -1.09
SS18-221ENST00000582448 P2RY1P47900 373 aa8.25□□□□□ -1.09
SS18-221ENST00000582448 PRRX1P54821 245 aa8.25□□□□□ -1.09
SS18-221ENST00000582448 RPL23AP62750 156 aaKnown RBP8.25□□□□□ -1.09
SS18-221ENST00000582448 ZNF816Q0VGE8 651 aaPredicted RBP8.25□□□□□ -1.09
SS18-221ENST00000582448 RTL8BQ17RB0 113 aa8.25□□□□□ -1.09
SS18-221ENST00000582448 CT45A1Q5HYN5 189 aa8.25□□□□□ -1.09
SS18-221ENST00000582448 OR2B11Q5JQS5 317 aa8.25□□□□□ -1.09
SS18-221ENST00000582448 GPR157Q5UAW9 335 aa8.25□□□□□ -1.09
SS18-221ENST00000582448 SLC25A48Q6ZT89 311 aaKnown RBP8.25□□□□□ -1.09
SS18-221ENST00000582448 TCF23Q7RTU1 214 aa8.25□□□□□ -1.09
SS18-221ENST00000582448 FGFRL1Q8N441 504 aa8.25□□□□□ -1.09
SS18-221ENST00000582448 OR4S2Q8NH73 311 aa8.25□□□□□ -1.09
SS18-221ENST00000582448 OR9G1Q8NH87 305 aa8.25□□□□□ -1.09
SS18-221ENST00000582448 CT45A3Q8NHU0 189 aa8.25□□□□□ -1.09
SS18-221ENST00000582448 TNFRSF14Q92956 283 aa8.25□□□□□ -1.09
SS18-221ENST00000582448 LEAP2Q969E1 77 aa8.25□□□□□ -1.09
SS18-221ENST00000582448 AQP10Q96PS8 301 aa8.25□□□□□ -1.09
SS18-221ENST00000582448 RNF126Q9BV68 326 aa8.25□□□□□ -1.09
SS18-221ENST00000582448 ZNF471Q9BX82 626 aaPredicted RBP8.25□□□□□ -1.09
SS18-221ENST00000582448 SLC25A31Q9H0C2 315 aa8.25□□□□□ -1.09
SS18-221ENST00000582448 PATZ1Q9HBE1 687 aaKnown RBP8.25□□□□□ -1.09
SS18-221ENST00000582448 INSIG2Q9Y5U4 225 aa8.25□□□□□ -1.09
SS18-221ENST00000582448 SESN1Q9Y6P5 492 aa8.25□□□□□ -1.09
SS18-221ENST00000582448 CMYA5Q8N3K9 4069 aa8.25□□□□□ -1.09
SS18-221ENST00000582448 PKD1L1Q8TDX9 2849 aa8.24□□□□□ -1.09
SS18-221ENST00000582448 SAA2-SAA4A0A096LPE2 208 aa8.24□□□□□ -1.09
SS18-221ENST00000582448 C17orf98A8MV24 154 aa8.24□□□□□ -1.09
SS18-221ENST00000582448 FAM90A26D6RGX4 464 aa8.24□□□□□ -1.09
SS18-221ENST00000582448 SSSCA1O60232 199 aa8.24□□□□□ -1.09
SS18-221ENST00000582448 FCGR3BO75015 233 aa8.24□□□□□ -1.09
SS18-221ENST00000582448 MED6O75586 246 aa8.24□□□□□ -1.09
SS18-221ENST00000582448 APOA2P02652 100 aa8.24□□□□□ -1.09
SS18-221ENST00000582448 SAA2P0DJI9 122 aaPredicted RBP8.24□□□□□ -1.09
SS18-221ENST00000582448 RRASP10301 218 aa8.24□□□□□ -1.09
SS18-221ENST00000582448 TPT1P13693 172 aaKnown RBP8.24□□□□□ -1.09
SS18-221ENST00000582448 GYPEP15421 78 aa8.24□□□□□ -1.09
SS18-221ENST00000582448 CAV2P51636 162 aa8.24□□□□□ -1.09
SS18-221ENST00000582448 ARHGDIBP52566 201 aa8.24□□□□□ -1.09
SS18-221ENST00000582448 ZNF134P52741 427 aa8.24□□□□□ -1.09
SS18-221ENST00000582448 RPL30P62888 115 aaKnown RBP8.24□□□□□ -1.09
SS18-221ENST00000582448 ZNF585BQ52M93 769 aa8.24□□□□□ -1.09
SS18-221ENST00000582448 RPL39P5Q59GN2 51 aa8.24□□□□□ -1.09
SS18-221ENST00000582448 C19orf54Q5BKX5 351 aa8.24□□□□□ -1.09
SS18-221ENST00000582448 WDR25Q64LD2 544 aaPredicted RBP8.24□□□□□ -1.09
SS18-221ENST00000582448 EIF5AL1Q6IS14 154 aaKnown RBP8.24□□□□□ -1.09
SS18-221ENST00000582448 FAM53AQ6NSI3 398 aaPredicted RBP8.24□□□□□ -1.09
SS18-221ENST00000582448 ZNF439Q8NDP4 499 aa8.24□□□□□ -1.09
SS18-221ENST00000582448 ZNF680Q8NEM1 530 aa8.24□□□□□ -1.09
SS18-221ENST00000582448 GPR146Q96CH1 333 aa8.24□□□□□ -1.09
SS18-221ENST00000582448 CLCC1Q96S66 551 aa8.24□□□□□ -1.09
SS18-221ENST00000582448 TMEM133Q9H2Q1 129 aa8.24□□□□□ -1.09
SS18-221ENST00000582448 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.24□□□□□ -1.09
SS18-221ENST00000582448 COA4Q9NYJ1 87 aa8.24□□□□□ -1.09
SS18-221ENST00000582448 OR5AC2Q9NZP5 309 aa8.24□□□□□ -1.09
SS18-221ENST00000582448 ONECUT1Q9UBC0 465 aa8.24□□□□□ -1.09
SS18-221ENST00000582448 CACNG5Q9UF02 275 aa8.24□□□□□ -1.09
SS18-221ENST00000582448 RCL1Q9Y2P8 373 aaKnown RBP8.24□□□□□ -1.09
SS18-221ENST00000582448 AMMECR1Q9Y4X0 333 aaPredicted RBP8.24□□□□□ -1.09
SS18-221ENST00000582448 BORCS7-ASMTA0A0B4J1R7 106 aa8.23□□□□□ -1.09
SS18-221ENST00000582448 A0A1W2PPE3 182 aa8.23□□□□□ -1.09
SS18-221ENST00000582448 RNF222A6NCQ9 220 aa8.23□□□□□ -1.09
SS18-221ENST00000582448 MARCH11A6NNE9 402 aa8.23□□□□□ -1.09
SS18-221ENST00000582448 FAM90A9PA6NNJ1 464 aa8.23□□□□□ -1.09
SS18-221ENST00000582448 LINC00473A8K010 186 aa8.23□□□□□ -1.09
SS18-221ENST00000582448 H0YIZ8 118 aa8.23□□□□□ -1.09
SS18-221ENST00000582448 CLDN34H7C241 214 aa8.23□□□□□ -1.09
SS18-221ENST00000582448 M0QZ24 198 aa8.23□□□□□ -1.09
SS18-221ENST00000582448 SLC31A2O15432 143 aa8.23□□□□□ -1.09
SS18-221ENST00000582448 RAMP3O60896 148 aa8.23□□□□□ -1.09
SS18-221ENST00000582448 S1PR2O95136 353 aa8.23□□□□□ -1.09
SS18-221ENST00000582448 SPDEFO95238 335 aa8.23□□□□□ -1.09
SS18-221ENST00000582448 HRASP01112 189 aa8.23□□□□□ -1.09
SS18-221ENST00000582448 IGHV1-8P0DP01 117 aa8.23□□□□□ -1.09
SS18-221ENST00000582448 NQO2P16083 231 aa8.23□□□□□ -1.09
SS18-221ENST00000582448 EIF4EBP1Q13541 118 aaPredicted RBP8.23□□□□□ -1.09
SS18-221ENST00000582448 DEFB112Q30KQ8 113 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms