RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 DLK1P80370 383 aa18.46■□□□□ 0.55
CCDC47-204ENST00000582252 TMEM177Q53S58 311 aa18.46■□□□□ 0.55
CCDC47-204ENST00000582252 ZNF506Q5JVG8 444 aa18.46■□□□□ 0.55
CCDC47-204ENST00000582252 ABHD12Q8N2K0 398 aa18.46■□□□□ 0.55
CCDC47-204ENST00000582252 ZNRD1Q9P1U0 126 aa18.46■□□□□ 0.55
CCDC47-204ENST00000582252 DCHS2Q6V1P9 2916 aa18.45■□□□□ 0.54
CCDC47-204ENST00000582252 KBTBD11O94819 623 aa18.45■□□□□ 0.54
CCDC47-204ENST00000582252 HSPB1P04792 205 aaKnown RBP18.45■□□□□ 0.54
CCDC47-204ENST00000582252 KHDC3LQ587J8 217 aa18.45■□□□□ 0.54
CCDC47-204ENST00000582252 C11orf71Q6IPW1 123 aa18.45■□□□□ 0.54
CCDC47-204ENST00000582252 VSTM2AQ8TAG5 236 aa18.45■□□□□ 0.54
CCDC47-204ENST00000582252 FLYWCH2Q96CP2 140 aaKnown RBP18.45■□□□□ 0.54
CCDC47-204ENST00000582252 NEIL1Q96FI4 390 aaPredicted RBP18.45■□□□□ 0.54
CCDC47-204ENST00000582252 RCC1LQ96I51 464 aaKnown RBP18.45■□□□□ 0.54
CCDC47-204ENST00000582252 HARBI1Q96MB7 349 aa18.45■□□□□ 0.54
CCDC47-204ENST00000582252 NPCDR1Q9BY65 106 aa18.45■□□□□ 0.54
CCDC47-204ENST00000582252 UTP20O75691 2785 aaKnown RBP18.44■□□□□ 0.54
CCDC47-204ENST00000582252 hCG_1809904A0A1W2PP81 198 aa18.44■□□□□ 0.54
CCDC47-204ENST00000582252 A0A1W2PPE2 198 aa18.44■□□□□ 0.54
CCDC47-204ENST00000582252 A0A1W2PPR1 153 aa18.44■□□□□ 0.54
CCDC47-204ENST00000582252 A0A1W2PR64 198 aa18.44■□□□□ 0.54
CCDC47-204ENST00000582252 A0A1W2PRV1 198 aa18.44■□□□□ 0.54
CCDC47-204ENST00000582252 F12P00748 615 aaPredicted RBP18.44■□□□□ 0.54
CCDC47-204ENST00000582252 IFNA1P01562 189 aa18.44■□□□□ 0.54
CCDC47-204ENST00000582252 IGKV1-16P04430 117 aa18.44■□□□□ 0.54
CCDC47-204ENST00000582252 NPBWR1P48145 328 aa18.44■□□□□ 0.54
CCDC47-204ENST00000582252 ATP5IP56385 69 aaPredicted RBP18.44■□□□□ 0.54
CCDC47-204ENST00000582252 DTX2Q86UW9 622 aa18.44■□□□□ 0.54
CCDC47-204ENST00000582252 TGIF2LXQ8IUE1 241 aa18.44■□□□□ 0.54
CCDC47-204ENST00000582252 SLC24A4Q8NFF2 622 aa18.44■□□□□ 0.54
CCDC47-204ENST00000582252 OR4C13Q8NGP0 309 aa18.44■□□□□ 0.54
CCDC47-204ENST00000582252 OR4A5Q8NH83 315 aa18.44■□□□□ 0.54
CCDC47-204ENST00000582252 CLDND2Q8NHS1 167 aa18.44■□□□□ 0.54
CCDC47-204ENST00000582252 NABP2Q9BQ15 211 aa18.44■□□□□ 0.54
CCDC47-204ENST00000582252 VSIRQ9H7M9 311 aa18.44■□□□□ 0.54
CCDC47-204ENST00000582252 PLEKHA3Q9HB20 300 aa18.44■□□□□ 0.54
CCDC47-204ENST00000582252 SLC39A9Q9NUM3 307 aa18.44■□□□□ 0.54
CCDC47-204ENST00000582252 WDR83OSQ9Y284 106 aa18.44■□□□□ 0.54
CCDC47-204ENST00000582252 TET2Q6N021 2002 aaPredicted RBP18.44■□□□□ 0.54
CCDC47-204ENST00000582252 FAM74A7A6NL05 159 aa18.43■□□□□ 0.54
CCDC47-204ENST00000582252 IFNA4P05014 189 aa18.43■□□□□ 0.54
CCDC47-204ENST00000582252 MDKP21741 143 aaPredicted RBP18.43■□□□□ 0.54
CCDC47-204ENST00000582252 NPY1RP25929 384 aa18.43■□□□□ 0.54
CCDC47-204ENST00000582252 MC5RP33032 325 aa18.43■□□□□ 0.54
CCDC47-204ENST00000582252 PRRX1P54821 245 aa18.43■□□□□ 0.54
CCDC47-204ENST00000582252 RPS16P62249 146 aaKnown RBP18.43■□□□□ 0.54
CCDC47-204ENST00000582252 PRCDQ00LT1 54 aa18.43■□□□□ 0.54
CCDC47-204ENST00000582252 HAGHQ16775 308 aa18.43■□□□□ 0.54
CCDC47-204ENST00000582252 FAM74A3Q4VXF1 159 aa18.43■□□□□ 0.54
CCDC47-204ENST00000582252 ZNF841Q6ZN19 808 aa18.43■□□□□ 0.54
CCDC47-204ENST00000582252 OR5B3Q8NH48 314 aa18.43■□□□□ 0.54
CCDC47-204ENST00000582252 LHX4Q969G2 390 aa18.43■□□□□ 0.54
CCDC47-204ENST00000582252 WASHC3Q9Y3C0 194 aa18.43■□□□□ 0.54
CCDC47-204ENST00000582252 MAP1LC3B2A6NCE7 125 aa18.43■□□□□ 0.54
CCDC47-204ENST00000582252 NUPL2O15504 423 aaKnown RBP18.43■□□□□ 0.54
CCDC47-204ENST00000582252 SAA1P0DJI8 122 aaPredicted RBP18.43■□□□□ 0.54
CCDC47-204ENST00000582252 SOHLH1Q5JUK2 328 aa18.43■□□□□ 0.54
CCDC47-204ENST00000582252 FFAR4Q5NUL3 377 aa18.43■□□□□ 0.54
CCDC47-204ENST00000582252 C8orf46Q8TAG6 207 aa18.43■□□□□ 0.54
CCDC47-204ENST00000582252 ST6GALNAC6Q969X2 333 aa18.43■□□□□ 0.54
CCDC47-204ENST00000582252 RARRES2Q99969 163 aa18.43■□□□□ 0.54
CCDC47-204ENST00000582252 MAP1LC3BQ9GZQ8 125 aa18.43■□□□□ 0.54
CCDC47-204ENST00000582252 KCNIP2Q9NS61 270 aa18.43■□□□□ 0.54
CCDC47-204ENST00000582252 TENM4Q6N022 2769 aa18.42■□□□□ 0.54
CCDC47-204ENST00000582252 ACOT6Q3I5F7 207 aaPredicted RBP18.42■□□□□ 0.54
CCDC47-204ENST00000582252 AVPI1Q5T686 147 aa18.42■□□□□ 0.54
CCDC47-204ENST00000582252 LCN15Q6UWW0 184 aa18.42■□□□□ 0.54
CCDC47-204ENST00000582252 ACTR3CQ9C0K3 210 aaPredicted RBP18.42■□□□□ 0.54
CCDC47-204ENST00000582252 UBTD1Q9HAC8 227 aa18.42■□□□□ 0.54
CCDC47-204ENST00000582252 DOPEY2Q9Y3R5 2298 aa18.42■□□□□ 0.54
CCDC47-204ENST00000582252 CTXND1A0A1B0GTU2 59 aa18.41■□□□□ 0.54
CCDC47-204ENST00000582252 SMCO3A2RU48 225 aa18.41■□□□□ 0.54
CCDC47-204ENST00000582252 RRHO14718 337 aa18.41■□□□□ 0.54
CCDC47-204ENST00000582252 USF1P22415 310 aaPredicted RBP18.41■□□□□ 0.54
CCDC47-204ENST00000582252 ZNF726P1Q15940 193 aa18.41■□□□□ 0.54
CCDC47-204ENST00000582252 PPIAL4CA0A0B4J2A2 164 aa18.4■□□□□ 0.54
CCDC47-204ENST00000582252 LOC102723971A0A1B0GUV8 181 aa18.4■□□□□ 0.54
CCDC47-204ENST00000582252 SRRM4A7MD48 611 aaKnown RBP18.4■□□□□ 0.54
CCDC47-204ENST00000582252 SOD3P08294 240 aa18.4■□□□□ 0.54
CCDC47-204ENST00000582252 PPIAL4GP0DN37 164 aa18.4■□□□□ 0.54
CCDC47-204ENST00000582252 OR13C7P0DN81 318 aa18.4■□□□□ 0.54
CCDC47-204ENST00000582252 PMS2P11Q13670 270 aa18.4■□□□□ 0.54
CCDC47-204ENST00000582252 ICAM4Q14773 271 aa18.4■□□□□ 0.54
CCDC47-204ENST00000582252 ACSM6Q6P461 480 aa18.4■□□□□ 0.54
CCDC47-204ENST00000582252 OR10G4Q8NGN3 311 aa18.4■□□□□ 0.54
CCDC47-204ENST00000582252 OR10G9Q8NGN4 311 aa18.4■□□□□ 0.54
CCDC47-204ENST00000582252 OR10G7Q8NGN6 311 aa18.4■□□□□ 0.54
CCDC47-204ENST00000582252 HINT2Q9BX68 163 aa18.4■□□□□ 0.54
CCDC47-204ENST00000582252 GNG13Q9P2W3 67 aa18.4■□□□□ 0.54
CCDC47-204ENST00000582252 PRSS46E5RG02 174 aa18.4■□□□□ 0.54
CCDC47-204ENST00000582252 CYB5BO43169 146 aa18.4■□□□□ 0.54
CCDC47-204ENST00000582252 COX6B1P14854 86 aa18.4■□□□□ 0.54
CCDC47-204ENST00000582252 TAGLN2P37802 199 aaKnown RBP18.4■□□□□ 0.54
CCDC47-204ENST00000582252 REG1BP48304 166 aa18.4■□□□□ 0.54
CCDC47-204ENST00000582252 WDR25Q64LD2 544 aaPredicted RBP18.4■□□□□ 0.54
CCDC47-204ENST00000582252 C11orf42Q8N5U0 333 aa18.4■□□□□ 0.54
CCDC47-204ENST00000582252 CLEC7AQ9BXN2 247 aa18.4■□□□□ 0.54
CCDC47-204ENST00000582252 NPVFQ9HCQ7 196 aa18.4■□□□□ 0.54
CCDC47-204ENST00000582252 AMMECR1Q9Y4X0 333 aaPredicted RBP18.4■□□□□ 0.54
CCDC47-204ENST00000582252 A1L4Q6 167 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms