RNA–Protein interactions for RNA: ENST00000581570.5

SS18-219, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-219ENST00000581570 PTBP1P26599 531 aaKnown RBP eCLIP9.3□□□□□ -0.92
SS18-219ENST00000581570 RAB11BQ15907 218 aa9.3□□□□□ -0.92
SS18-219ENST00000581570 SSX9Q7RTT3 188 aa9.3□□□□□ -0.92
SS18-219ENST00000581570 NR2C2APQ86WQ0 139 aa9.3□□□□□ -0.92
SS18-219ENST00000581570 ZNF645Q8N7E2 425 aa9.3□□□□□ -0.92
SS18-219ENST00000581570 NANOGP1Q8N7R0 232 aa9.3□□□□□ -0.92
SS18-219ENST00000581570 OR4S2Q8NH73 311 aa9.3□□□□□ -0.92
SS18-219ENST00000581570 THYN1Q9P016 225 aa9.3□□□□□ -0.92
SS18-219ENST00000581570 IGHV4-4A0A075B6R2 117 aa9.29□□□□□ -0.92
SS18-219ENST00000581570 M0R2N4 97 aa9.29□□□□□ -0.92
SS18-219ENST00000581570 DENRO43583 198 aaKnown RBP9.29□□□□□ -0.92
SS18-219ENST00000581570 CA1P00915 261 aaPredicted RBP9.29□□□□□ -0.92
SS18-219ENST00000581570 UCHL1P09936 223 aa9.29□□□□□ -0.92
SS18-219ENST00000581570 CD36P16671 472 aa9.29□□□□□ -0.92
SS18-219ENST00000581570 CLDN12P56749 244 aa9.29□□□□□ -0.92
SS18-219ENST00000581570 RPL8P62917 257 aaKnown RBP9.29□□□□□ -0.92
SS18-219ENST00000581570 TMEM187Q14656 261 aa9.29□□□□□ -0.92
SS18-219ENST00000581570 C2orf76Q3KRA6 126 aa9.29□□□□□ -0.92
SS18-219ENST00000581570 RAB3CQ96E17 227 aa9.29□□□□□ -0.92
SS18-219ENST00000581570 GFI1Q99684 422 aa9.29□□□□□ -0.92
SS18-219ENST00000581570 CENPOQ9BU64 300 aa9.29□□□□□ -0.92
SS18-219ENST00000581570 C20orf24Q9BUV8 137 aa9.29□□□□□ -0.92
SS18-219ENST00000581570 HRH4Q9H3N8 390 aa9.29□□□□□ -0.92
SS18-219ENST00000581570 RBMX2Q9Y388 322 aaKnown RBP9.29□□□□□ -0.92
SS18-219ENST00000581570 AK6Q9Y3D8 172 aaKnown RBP9.29□□□□□ -0.92
SS18-219ENST00000581570 IGHV3OR16-8A0A075B7F1 116 aa9.28□□□□□ -0.92
SS18-219ENST00000581570 TRAV10A0A0B4J240 114 aa9.28□□□□□ -0.92
SS18-219ENST00000581570 OR2T8A6NH00 312 aa9.28□□□□□ -0.92
SS18-219ENST00000581570 CGB1A6NKQ9 187 aa9.28□□□□□ -0.92
SS18-219ENST00000581570 K7EMT4 169 aa9.28□□□□□ -0.92
SS18-219ENST00000581570 NDUFA4O00483 81 aa9.28□□□□□ -0.92
SS18-219ENST00000581570 ZNF207O43670 478 aaKnown RBP9.28□□□□□ -0.92
SS18-219ENST00000581570 HLA-GP17693 338 aa9.28□□□□□ -0.92
SS18-219ENST00000581570 TFPI2P48307 235 aa9.28□□□□□ -0.92
SS18-219ENST00000581570 IRF3Q14653 427 aa9.28□□□□□ -0.92
SS18-219ENST00000581570 TCTEX1D2Q8WW35 142 aa9.28□□□□□ -0.92
SS18-219ENST00000581570 CYGBQ8WWM9 190 aa9.28□□□□□ -0.92
SS18-219ENST00000581570 FAM3DQ96BQ1 224 aa9.28□□□□□ -0.92
SS18-219ENST00000581570 IGKV1D-8A0A087WSZ0 117 aa9.27□□□□□ -0.93
SS18-219ENST00000581570 MRPS14O60783 128 aaKnown RBP9.27□□□□□ -0.93
SS18-219ENST00000581570 SLC22A5O76082 557 aa9.27□□□□□ -0.93
SS18-219ENST00000581570 HRASP01112 189 aa9.27□□□□□ -0.93
SS18-219ENST00000581570 GNB3P16520 340 aa9.27□□□□□ -0.93
SS18-219ENST00000581570 HLA-DMBP28068 263 aa9.27□□□□□ -0.93
SS18-219ENST00000581570 PLA2G7Q13093 441 aa9.27□□□□□ -0.93
SS18-219ENST00000581570 SSX1Q16384 188 aa9.27□□□□□ -0.93
SS18-219ENST00000581570 PVRIGQ6DKI7 326 aa9.27□□□□□ -0.93
SS18-219ENST00000581570 AHSA2Q719I0 299 aa9.27□□□□□ -0.93
SS18-219ENST00000581570 ZNF575Q86XF7 245 aa9.27□□□□□ -0.93
SS18-219ENST00000581570 CENPSQ8N2Z9 138 aa9.27□□□□□ -0.93
SS18-219ENST00000581570 POM121L12Q8N7R1 296 aa9.27□□□□□ -0.93
SS18-219ENST00000581570 VN1R17PQ8TDU5 208 aa9.27□□□□□ -0.93
SS18-219ENST00000581570 BSCL2Q96G97 398 aaPredicted RBP9.27□□□□□ -0.93
SS18-219ENST00000581570 RNF2Q99496 336 aa9.27□□□□□ -0.93
SS18-219ENST00000581570 RNF126Q9BV68 326 aa9.27□□□□□ -0.93
SS18-219ENST00000581570 PSORS1C1Q9UIG5 152 aa9.27□□□□□ -0.93
SS18-219ENST00000581570 RAB22AQ9UL26 194 aa9.27□□□□□ -0.93
SS18-219ENST00000581570 SPATA2Q9UM82 520 aa9.27□□□□□ -0.93
SS18-219ENST00000581570 OR2W1Q9Y3N9 320 aa9.27□□□□□ -0.93
SS18-219ENST00000581570 PKD1P98161 4303 aa9.27□□□□□ -0.93
SS18-219ENST00000581570 IGKV3-7A0A075B6H7 116 aa9.26□□□□□ -0.93
SS18-219ENST00000581570 A0A075B6Q4 140 aa9.26□□□□□ -0.93
SS18-219ENST00000581570 TMEM272A0A1B0GTI8 110 aa9.26□□□□□ -0.93
SS18-219ENST00000581570 IGLV2-14P01704 120 aa9.26□□□□□ -0.93
SS18-219ENST00000581570 HLA-DQB1P01920 261 aa9.26□□□□□ -0.93
SS18-219ENST00000581570 NFYAP23511 347 aaPredicted RBP9.26□□□□□ -0.93
SS18-219ENST00000581570 GADD45AP24522 165 aa9.26□□□□□ -0.93
SS18-219ENST00000581570 TALDO1P37837 337 aa9.26□□□□□ -0.93
SS18-219ENST00000581570 BRWD1-AS2P59051 145 aa9.26□□□□□ -0.93
SS18-219ENST00000581570 OR2B8PP59922 312 aa9.26□□□□□ -0.93
SS18-219ENST00000581570 SPSB3Q6PJ21 355 aa9.26□□□□□ -0.93
SS18-219ENST00000581570 Q6ZS49 121 aa9.26□□□□□ -0.93
SS18-219ENST00000581570 Q6ZTC4 211 aa9.26□□□□□ -0.93
SS18-219ENST00000581570 C10orf67Q8IYJ2 551 aa9.26□□□□□ -0.93
SS18-219ENST00000581570 PQLC1Q8N2U9 271 aa9.26□□□□□ -0.93
SS18-219ENST00000581570 MFSD4AQ8N468 514 aa9.26□□□□□ -0.93
SS18-219ENST00000581570 Q8NAQ8 132 aa9.26□□□□□ -0.93
SS18-219ENST00000581570 OR10R2Q8NGX6 335 aa9.26□□□□□ -0.93
SS18-219ENST00000581570 HSD17B10Q99714 261 aaKnown RBP9.26□□□□□ -0.93
SS18-219ENST00000581570 CHRDL1Q9BU40 450 aa9.26□□□□□ -0.93
SS18-219ENST00000581570 SMPXQ9UHP9 88 aa9.26□□□□□ -0.93
SS18-219ENST00000581570 ETV7Q9Y603 341 aa9.26□□□□□ -0.93
SS18-219ENST00000581570 HSPG2P98160 4391 aa9.26□□□□□ -0.93
SS18-219ENST00000581570 IGLC7A0M8Q6 106 aa9.25□□□□□ -0.93
SS18-219ENST00000581570 ERICH4A6NGS2 130 aa9.25□□□□□ -0.93
SS18-219ENST00000581570 C15orf62A8K5M9 175 aa9.25□□□□□ -0.93
SS18-219ENST00000581570 MFNGO00587 321 aa9.25□□□□□ -0.93
SS18-219ENST00000581570 CYB5BO43169 146 aa9.25□□□□□ -0.93
SS18-219ENST00000581570 RBMY1A1P0DJD3 496 aaKnown RBP9.25□□□□□ -0.93
SS18-219ENST00000581570 RBMY1CP0DJD4 496 aa9.25□□□□□ -0.93
SS18-219ENST00000581570 P0DMU3 169 aa9.25□□□□□ -0.93
SS18-219ENST00000581570 FAM231AP0DMU4 169 aa9.25□□□□□ -0.93
SS18-219ENST00000581570 FAM231CP0DMU5 169 aa9.25□□□□□ -0.93
SS18-219ENST00000581570 RANBP1P43487 201 aa9.25□□□□□ -0.93
SS18-219ENST00000581570 RBMY1FQ15415 496 aaKnown RBP9.25□□□□□ -0.93
SS18-219ENST00000581570 LGALS9BQ3B8N2 356 aa9.25□□□□□ -0.93
SS18-219ENST00000581570 SLC25A24Q6NUK1 477 aa9.25□□□□□ -0.93
SS18-219ENST00000581570 TMEM203Q969S6 136 aa9.25□□□□□ -0.93
SS18-219ENST00000581570 RHPN1-AS1Q9BWJ2 59 aa9.25□□□□□ -0.93
SS18-219ENST00000581570 S100A14Q9HCY8 104 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms