RNA–Protein interactions for RNA: ENST00000579743.2

GGA3-208, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-208ENST00000579743 GVQW1Q8N7I0 195 aa10.38□□□□□ -0.75
GGA3-208ENST00000579743 TSPAN14Q8NG11 270 aa10.38□□□□□ -0.75
GGA3-208ENST00000579743 GIMAP1Q8WWP7 306 aa10.38□□□□□ -0.75
GGA3-208ENST00000579743 MARC2Q969Z3 335 aa10.38□□□□□ -0.75
GGA3-208ENST00000579743 AUNIPQ9H7T9 357 aa10.38□□□□□ -0.75
GGA3-208ENST00000579743 EDA2RQ9HAV5 297 aa10.38□□□□□ -0.75
GGA3-208ENST00000579743 LCE6AA0A183 80 aa10.37□□□□□ -0.75
GGA3-208ENST00000579743 ZNF785A8K8V0 405 aa10.37□□□□□ -0.75
GGA3-208ENST00000579743 SULT1C2O00338 296 aa10.37□□□□□ -0.75
GGA3-208ENST00000579743 NDUFB8O95169 186 aa10.37□□□□□ -0.75
GGA3-208ENST00000579743 HLA-AP01891 365 aaKnown RBP10.37□□□□□ -0.75
GGA3-208ENST00000579743 AREGP15514 252 aa10.37□□□□□ -0.75
GGA3-208ENST00000579743 CTRB1P17538 263 aa10.37□□□□□ -0.75
GGA3-208ENST00000579743 NEDD8Q15843 81 aa10.37□□□□□ -0.75
GGA3-208ENST00000579743 CTRB2Q6GPI1 263 aa10.37□□□□□ -0.75
GGA3-208ENST00000579743 TMEM17Q86X19 198 aa10.37□□□□□ -0.75
GGA3-208ENST00000579743 CMTM1Q8IZ96 169 aa10.37□□□□□ -0.75
GGA3-208ENST00000579743 OR5H6Q8NGV6 325 aa10.37□□□□□ -0.75
GGA3-208ENST00000579743 SRD5A3Q9H8P0 318 aa10.37□□□□□ -0.75
GGA3-208ENST00000579743 PLEKHA2Q9HB19 425 aa10.37□□□□□ -0.75
GGA3-208ENST00000579743 ZC4H2Q9NQZ6 224 aa10.37□□□□□ -0.75
GGA3-208ENST00000579743 COMMD9Q9P000 198 aa10.37□□□□□ -0.75
GGA3-208ENST00000579743 UFC1Q9Y3C8 167 aa10.37□□□□□ -0.75
GGA3-208ENST00000579743 XRCC3O43542 346 aa10.36□□□□□ -0.75
GGA3-208ENST00000579743 JTBO76095 146 aa10.36□□□□□ -0.75
GGA3-208ENST00000579743 IGHV3-23P01764 117 aa10.36□□□□□ -0.75
GGA3-208ENST00000579743 CLEC3BP05452 202 aa10.36□□□□□ -0.75
GGA3-208ENST00000579743 CLEC2LP0C7M8 214 aa10.36□□□□□ -0.75
GGA3-208ENST00000579743 MYOD1P15172 320 aa10.36□□□□□ -0.75
GGA3-208ENST00000579743 TAS2R46P59540 309 aa10.36□□□□□ -0.75
GGA3-208ENST00000579743 PLET1Q6UQ28 207 aa10.36□□□□□ -0.75
GGA3-208ENST00000579743 RBPMS2Q6ZRY4 209 aaKnown RBP10.36□□□□□ -0.75
GGA3-208ENST00000579743 OR52B4Q8NGK2 314 aa10.36□□□□□ -0.75
GGA3-208ENST00000579743 OR51H1Q8NH63 302 aa10.36□□□□□ -0.75
GGA3-208ENST00000579743 SLC25A38Q96DW6 304 aa10.36□□□□□ -0.75
GGA3-208ENST00000579743 FANCD2OSQ96PS1 177 aa10.36□□□□□ -0.75
GGA3-208ENST00000579743 QTRT1Q9BXR0 403 aaKnown RBP10.36□□□□□ -0.75
GGA3-208ENST00000579743 EHFQ9NZC4 300 aa10.36□□□□□ -0.75
GGA3-208ENST00000579743 KMT2CQ8NEZ4 4911 aaKnown RBP10.36□□□□□ -0.75
GGA3-208ENST00000579743 TRAV25A0A0B4J276 109 aa10.35□□□□□ -0.75
GGA3-208ENST00000579743 A8MWP6 167 aa10.35□□□□□ -0.75
GGA3-208ENST00000579743 E7EUB6 86 aa10.35□□□□□ -0.75
GGA3-208ENST00000579743 UPK2O00526 184 aa10.35□□□□□ -0.75
GGA3-208ENST00000579743 SNAPC5O75971 98 aa10.35□□□□□ -0.75
GGA3-208ENST00000579743 REG1AP05451 166 aa10.35□□□□□ -0.75
GGA3-208ENST00000579743 CD7P09564 240 aa10.35□□□□□ -0.75
GGA3-208ENST00000579743 BRWD1-AS2P59051 145 aa10.35□□□□□ -0.75
GGA3-208ENST00000579743 OR2B8PP59922 312 aa10.35□□□□□ -0.75
GGA3-208ENST00000579743 POU2AF1Q16633 256 aa10.35□□□□□ -0.75
GGA3-208ENST00000579743 KLK9Q2XQG4 91 aa10.35□□□□□ -0.75
GGA3-208ENST00000579743 KCTD21Q4G0X4 260 aa10.35□□□□□ -0.75
GGA3-208ENST00000579743 UBE2NLQ5JXB2 153 aa10.35□□□□□ -0.75
GGA3-208ENST00000579743 SLC38A6Q8IZM9 456 aa10.35□□□□□ -0.75
GGA3-208ENST00000579743 DEFB125Q8N687 156 aa10.35□□□□□ -0.75
GGA3-208ENST00000579743 UXS1Q8NBZ7 420 aa10.35□□□□□ -0.75
GGA3-208ENST00000579743 OR5H2Q8NGV7 314 aa10.35□□□□□ -0.75
GGA3-208ENST00000579743 CCDC140Q96MF4 163 aa10.35□□□□□ -0.75
GGA3-208ENST00000579743 GPHA2Q96T91 129 aa10.35□□□□□ -0.75
GGA3-208ENST00000579743 HIPK2Q9H2X6 1198 aa10.35□□□□□ -0.75
GGA3-208ENST00000579743 TMEM140Q9NV12 185 aa10.35□□□□□ -0.75
GGA3-208ENST00000579743 MRPL27Q9P0M9 148 aaKnown RBP10.35□□□□□ -0.75
GGA3-208ENST00000579743 KLK9Q9UKQ9 250 aa10.35□□□□□ -0.75
GGA3-208ENST00000579743 IGLV11-55A0A075B6I3 123 aa10.34□□□□□ -0.75
GGA3-208ENST00000579743 FCER2P06734 321 aa10.34□□□□□ -0.75
GGA3-208ENST00000579743 TRAPPC2P0DI81 140 aa10.34□□□□□ -0.75
GGA3-208ENST00000579743 TRAPPC2BP0DI82 140 aa10.34□□□□□ -0.75
GGA3-208ENST00000579743 PTHLHP12272 177 aa10.34□□□□□ -0.75
GGA3-208ENST00000579743 PTBP1P26599 531 aaKnown RBP eCLIP10.34□□□□□ -0.75
GGA3-208ENST00000579743 ELLP55199 621 aaPredicted RBP10.34□□□□□ -0.75
GGA3-208ENST00000579743 TMEM69Q5SWH9 247 aa10.34□□□□□ -0.75
GGA3-208ENST00000579743 LPCAT3Q6P1A2 487 aa10.34□□□□□ -0.75
GGA3-208ENST00000579743 ADAMTSL5Q6ZMM2 481 aa10.34□□□□□ -0.75
GGA3-208ENST00000579743 ZNF818PQ6ZRF7 136 aa10.34□□□□□ -0.75
GGA3-208ENST00000579743 OR1L6Q8NGR2 347 aa10.34□□□□□ -0.75
GGA3-208ENST00000579743 OR1L8Q8NGR8 309 aa10.34□□□□□ -0.75
GGA3-208ENST00000579743 OR6F1Q8NGZ6 308 aa10.34□□□□□ -0.75
GGA3-208ENST00000579743 VN1R17PQ8TDU5 208 aa10.34□□□□□ -0.75
GGA3-208ENST00000579743 WDR89Q96FK6 387 aaPredicted RBP10.34□□□□□ -0.75
GGA3-208ENST00000579743 RNF167Q9H6Y7 350 aa10.34□□□□□ -0.75
GGA3-208ENST00000579743 BATF3Q9NR55 127 aa10.34□□□□□ -0.75
GGA3-208ENST00000579743 FKBP11Q9NYL4 201 aa10.34□□□□□ -0.75
GGA3-208ENST00000579743 DMRT1Q9Y5R6 373 aa10.34□□□□□ -0.75
GGA3-208ENST00000579743 S4R3C0 116 aa10.34□□□□□ -0.75
GGA3-208ENST00000579743 SMIM31A0A1B0GVY4 71 aa10.33□□□□□ -0.76
GGA3-208ENST00000579743 MARCH11A6NNE9 402 aa10.33□□□□□ -0.76
GGA3-208ENST00000579743 OR13C7P0DN81 318 aa10.33□□□□□ -0.76
GGA3-208ENST00000579743 F2RP25116 425 aa10.33□□□□□ -0.76
GGA3-208ENST00000579743 GPR183P32249 361 aa10.33□□□□□ -0.76
GGA3-208ENST00000579743 PRSS3P35030 304 aa10.33□□□□□ -0.76
GGA3-208ENST00000579743 LAMTOR1Q6IAA8 161 aa10.33□□□□□ -0.76
GGA3-208ENST00000579743 SLC25A24Q6NUK1 477 aa10.33□□□□□ -0.76
GGA3-208ENST00000579743 SPSB3Q6PJ21 355 aa10.33□□□□□ -0.76
GGA3-208ENST00000579743 DHRS11Q6UWP2 260 aa10.33□□□□□ -0.76
GGA3-208ENST00000579743 LINC00322Q6ZN03 302 aaPredicted RBP10.33□□□□□ -0.76
GGA3-208ENST00000579743 TMEM61Q8N0U2 210 aa10.33□□□□□ -0.76
GGA3-208ENST00000579743 SAMD12Q8N8I0 201 aa10.33□□□□□ -0.76
GGA3-208ENST00000579743 GDPD1Q8N9F7 314 aa10.33□□□□□ -0.76
GGA3-208ENST00000579743 TMEM56Q96MV1 263 aa10.33□□□□□ -0.76
GGA3-208ENST00000579743 TSC22D3Q99576 134 aa10.33□□□□□ -0.76
GGA3-208ENST00000579743 ZNF2Q9BSG1 426 aaPredicted RBP10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms